RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 UBE2E1P51965 193 aa10.92□□□□□ -0.66
NUP188-211ENST00000550219 FAM189A2Q15884 450 aa10.92□□□□□ -0.66
NUP188-211ENST00000550219 MPV17LQ2QL34 196 aa10.92□□□□□ -0.66
NUP188-211ENST00000550219 CD177Q8N6Q3 437 aa10.92□□□□□ -0.66
NUP188-211ENST00000550219 OR5R1Q8NH85 324 aa10.92□□□□□ -0.66
NUP188-211ENST00000550219 FAM110DQ8TAY7 271 aaPredicted RBP10.92□□□□□ -0.66
NUP188-211ENST00000550219 C17orf50Q8WW18 174 aa10.92□□□□□ -0.66
NUP188-211ENST00000550219 SDSLQ96GA7 329 aa10.92□□□□□ -0.66
NUP188-211ENST00000550219 DMRTB1Q96MA1 342 aa10.92□□□□□ -0.66
NUP188-211ENST00000550219 URM1Q9BTM9 101 aaKnown RBP10.92□□□□□ -0.66
NUP188-211ENST00000550219 C19orf12Q9NSK7 152 aa10.92□□□□□ -0.66
NUP188-211ENST00000550219 RHBDL2Q9NX52 303 aa10.92□□□□□ -0.66
NUP188-211ENST00000550219 MAB21L2Q9Y586 359 aa10.92□□□□□ -0.66
NUP188-211ENST00000550219 TRBV23-1A0A0A0MS06 115 aa10.91□□□□□ -0.66
NUP188-211ENST00000550219 RAB27BO00194 218 aa10.91□□□□□ -0.66
NUP188-211ENST00000550219 SH2D1BO14796 132 aa10.91□□□□□ -0.66
NUP188-211ENST00000550219 HAND1O96004 215 aa10.91□□□□□ -0.66
NUP188-211ENST00000550219 CHRM2P08172 466 aa10.91□□□□□ -0.66
NUP188-211ENST00000550219 COX7A1P24310 79 aa10.91□□□□□ -0.66
NUP188-211ENST00000550219 DUSP1P28562 367 aa10.91□□□□□ -0.66
NUP188-211ENST00000550219 C2orf68Q2NKX9 166 aa10.91□□□□□ -0.66
NUP188-211ENST00000550219 UBE2NLQ5JXB2 153 aa10.91□□□□□ -0.66
NUP188-211ENST00000550219 HIST2H2BDQ6DRA6 164 aa10.91□□□□□ -0.66
NUP188-211ENST00000550219 SIGIRRQ6IA17 410 aa10.91□□□□□ -0.66
NUP188-211ENST00000550219 SAMD12Q8N8I0 201 aa10.91□□□□□ -0.66
NUP188-211ENST00000550219 MCFD2Q8NI22 146 aa10.91□□□□□ -0.66
NUP188-211ENST00000550219 SSX3Q99909 188 aa10.91□□□□□ -0.66
NUP188-211ENST00000550219 MIXL1Q9H2W2 232 aa10.91□□□□□ -0.66
NUP188-211ENST00000550219 C16orf95Q9H693 158 aa10.91□□□□□ -0.66
NUP188-211ENST00000550219 RCC2Q9P258 522 aaKnown RBP10.91□□□□□ -0.66
NUP188-211ENST00000550219 COMMD3Q9UBI1 195 aa10.91□□□□□ -0.66
NUP188-211ENST00000550219 GLS2Q9UI32 602 aa10.91□□□□□ -0.66
NUP188-211ENST00000550219 SIGLEC9Q9Y336 463 aa10.91□□□□□ -0.66
NUP188-211ENST00000550219 A0A0A6YYH2 397 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 METTL21EPA6NDL7 271 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 A6NJ64 397 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 H3BUI4 141 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 CTDSP2O14595 271 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 DEGS1O15121 323 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 ZNF737O75373 536 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 TSPAN9O75954 239 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 OR2H2O95918 312 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 APOA1P02647 267 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 TMEM50BP56557 158 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 LRRC75BQ2VPJ9 315 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 SLC35E4Q6ICL7 350 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 HCP5Q6MZN7 132 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 C1orf122Q6ZSJ8 110 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 ZNF561Q8N587 486 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 C11orf44Q8N8P7 122 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 CHST4Q8NCG5 386 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 BEND2Q8NDZ0 799 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 OR4M1Q8NGD0 313 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 OR56B1Q8NGI3 324 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 OR5D13Q8NGL4 314 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 NICN1Q9BSH3 213 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 ZNF581Q9P0T4 197 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 OR14J1Q9UGF5 321 aa10.9□□□□□ -0.66
NUP188-211ENST00000550219 TRAV24A0A0B4J272 114 aa10.89□□□□□ -0.67
NUP188-211ENST00000550219 TMEM82A0PJX8 343 aa10.89□□□□□ -0.67
NUP188-211ENST00000550219 SLC33A1O00400 549 aaPredicted RBP10.89□□□□□ -0.67
NUP188-211ENST00000550219 SOCS1O15524 211 aa10.89□□□□□ -0.67
NUP188-211ENST00000550219 HPGDSO60760 199 aa10.89□□□□□ -0.67
NUP188-211ENST00000550219 PDCD6O75340 191 aa10.89□□□□□ -0.67
NUP188-211ENST00000550219 SCGNO76038 276 aa10.89□□□□□ -0.67
NUP188-211ENST00000550219 OR7C1O76099 320 aaPredicted RBP10.89□□□□□ -0.67
NUP188-211ENST00000550219 GLAP06280 429 aa10.89□□□□□ -0.67
NUP188-211ENST00000550219 EIF4EP06730 217 aaKnown RBP10.89□□□□□ -0.67
NUP188-211ENST00000550219 CSF1P09603 554 aa10.89□□□□□ -0.67
NUP188-211ENST00000550219 CCL3L1P16619 93 aa10.89□□□□□ -0.67
NUP188-211ENST00000550219 ELK1P19419 428 aa10.89□□□□□ -0.67
NUP188-211ENST00000550219 FUT3P21217 361 aa10.89□□□□□ -0.67
NUP188-211ENST00000550219 CHATP28329 748 aa10.89□□□□□ -0.67
NUP188-211ENST00000550219 VEGFCP49767 419 aa10.89□□□□□ -0.67
NUP188-211ENST00000550219 SNU13P55769 128 aaKnown RBP10.89□□□□□ -0.67
NUP188-211ENST00000550219 RPL31P62899 125 aaKnown RBP10.89□□□□□ -0.67
NUP188-211ENST00000550219 COL10A1Q03692 680 aa10.89□□□□□ -0.67
NUP188-211ENST00000550219 MOGAT2Q3SYC2 334 aa10.89□□□□□ -0.67
NUP188-211ENST00000550219 PLA1AQ53H76 456 aa10.89□□□□□ -0.67
NUP188-211ENST00000550219 RAB12Q6IQ22 244 aa10.89□□□□□ -0.67
NUP188-211ENST00000550219 ZNF782Q6ZMW2 699 aaPredicted RBP10.89□□□□□ -0.67
NUP188-211ENST00000550219 OR4C13Q8NGP0 309 aa10.89□□□□□ -0.67
NUP188-211ENST00000550219 ATG5Q9H1Y0 275 aa10.89□□□□□ -0.67
NUP188-211ENST00000550219 SPACA1Q9HBV2 294 aa10.89□□□□□ -0.67
NUP188-211ENST00000550219 PTTG2Q9NZH5 202 aa10.89□□□□□ -0.67
NUP188-211ENST00000550219 HSF4Q9ULV5 492 aa10.89□□□□□ -0.67
NUP188-211ENST00000550219 A0A1W2PPH5 198 aa10.88□□□□□ -0.67
NUP188-211ENST00000550219 MEX3AA1L020 520 aaKnown RBP10.88□□□□□ -0.67
NUP188-211ENST00000550219 K7N7A8 449 aa10.88□□□□□ -0.67
NUP188-211ENST00000550219 PSPNO60542 156 aa10.88□□□□□ -0.67
NUP188-211ENST00000550219 ZNF44P15621 663 aa10.88□□□□□ -0.67
NUP188-211ENST00000550219 GABRR1P24046 479 aa10.88□□□□□ -0.67
NUP188-211ENST00000550219 ZNF273Q14593 569 aa10.88□□□□□ -0.67
NUP188-211ENST00000550219 PLAC9Q5JTB6 97 aa10.88□□□□□ -0.67
NUP188-211ENST00000550219 Q6ZTK2 550 aa10.88□□□□□ -0.67
NUP188-211ENST00000550219 LAX1Q8IWV1 398 aa10.88□□□□□ -0.67
NUP188-211ENST00000550219 SUMF2Q8NBJ7 301 aa10.88□□□□□ -0.67
NUP188-211ENST00000550219 OR10R2Q8NGX6 335 aa10.88□□□□□ -0.67
NUP188-211ENST00000550219 S100A16Q96FQ6 103 aaKnown RBP10.88□□□□□ -0.67
NUP188-211ENST00000550219 SNX22Q96L94 193 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms