RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 SRMP19623 302 aa13.89□□□□□ -0.19
CHMP1A-208ENST00000550102 RAB13P51153 203 aa13.89□□□□□ -0.19
CHMP1A-208ENST00000550102 C1orf100Q5SVJ3 147 aa13.89□□□□□ -0.19
CHMP1A-208ENST00000550102 ZNF497Q6ZNH5 498 aa13.89□□□□□ -0.19
CHMP1A-208ENST00000550102 OR10A7Q8NGE5 316 aa13.89□□□□□ -0.19
CHMP1A-208ENST00000550102 FAM46BQ96A09 425 aa13.89□□□□□ -0.19
CHMP1A-208ENST00000550102 AMMECR1Q9Y4X0 333 aaPredicted RBP13.89□□□□□ -0.19
CHMP1A-208ENST00000550102 VWFP04275 2813 aa13.89□□□□□ -0.19
CHMP1A-208ENST00000550102 TRAV39A0A0B4J263 110 aa13.88□□□□□ -0.19
CHMP1A-208ENST00000550102 NPIPB11E5RHQ5 1161 aa13.88□□□□□ -0.19
CHMP1A-208ENST00000550102 JUNBP17275 347 aaPredicted RBP13.88□□□□□ -0.19
CHMP1A-208ENST00000550102 LTC4SQ16873 150 aa13.88□□□□□ -0.19
CHMP1A-208ENST00000550102 PRR31Q5SQ13 230 aa13.88□□□□□ -0.19
CHMP1A-208ENST00000550102 TMEM219Q86XT9 240 aa13.88□□□□□ -0.19
CHMP1A-208ENST00000550102 DTX3Q8N9I9 347 aa13.88□□□□□ -0.19
CHMP1A-208ENST00000550102 OR6M1Q8NGM8 313 aa13.88□□□□□ -0.19
CHMP1A-208ENST00000550102 OR2T6Q8NHC8 308 aa13.88□□□□□ -0.19
CHMP1A-208ENST00000550102 RFESDQ8TAC1 157 aa13.88□□□□□ -0.19
CHMP1A-208ENST00000550102 CITED1Q99966 193 aa13.88□□□□□ -0.19
CHMP1A-208ENST00000550102 MMP28Q9H239 520 aa13.88□□□□□ -0.19
CHMP1A-208ENST00000550102 ZNF696Q9H7X3 374 aa13.88□□□□□ -0.19
CHMP1A-208ENST00000550102 FBLN5Q9UBX5 448 aa13.88□□□□□ -0.19
CHMP1A-208ENST00000550102 TET2Q6N021 2002 aaPredicted RBP13.88□□□□□ -0.19
CHMP1A-208ENST00000550102 OOSP1A8MZH6 123 aa13.87□□□□□ -0.19
CHMP1A-208ENST00000550102 BUB1B-PAK6H3BSN5 160 aa13.87□□□□□ -0.19
CHMP1A-208ENST00000550102 SLC22A1O15245 554 aa13.87□□□□□ -0.19
CHMP1A-208ENST00000550102 PDCD6O75340 191 aa13.87□□□□□ -0.19
CHMP1A-208ENST00000550102 CA11O75493 328 aa13.87□□□□□ -0.19
CHMP1A-208ENST00000550102 MPIG6BO95866 241 aa13.87□□□□□ -0.19
CHMP1A-208ENST00000550102 GZMHP20718 246 aa13.87□□□□□ -0.19
CHMP1A-208ENST00000550102 FUT3P21217 361 aa13.87□□□□□ -0.19
CHMP1A-208ENST00000550102 HTR2CP28335 458 aa13.87□□□□□ -0.19
CHMP1A-208ENST00000550102 BRS3P32247 399 aa13.87□□□□□ -0.19
CHMP1A-208ENST00000550102 SRSF4Q08170 494 aaKnown RBP13.87□□□□□ -0.19
CHMP1A-208ENST00000550102 TPTE2P1Q5T6R2 138 aa13.87□□□□□ -0.19
CHMP1A-208ENST00000550102 CCDC144NLQ6NUI1 221 aa13.87□□□□□ -0.19
CHMP1A-208ENST00000550102 C11orf88Q6PI97 169 aa13.87□□□□□ -0.19
CHMP1A-208ENST00000550102 TMEM91Q6ZNR0 172 aa13.87□□□□□ -0.19
CHMP1A-208ENST00000550102 LEAP2Q969E1 77 aa13.87□□□□□ -0.19
CHMP1A-208ENST00000550102 TMEM59Q9BXS4 323 aa13.87□□□□□ -0.19
CHMP1A-208ENST00000550102 ACOT13Q9NPJ3 140 aa13.87□□□□□ -0.19
CHMP1A-208ENST00000550102 ETAA1Q9NY74 926 aa13.87□□□□□ -0.19
CHMP1A-208ENST00000550102 PEX16Q9Y5Y5 336 aa13.87□□□□□ -0.19
CHMP1A-208ENST00000550102 J3QR06 171 aa13.86□□□□□ -0.19
CHMP1A-208ENST00000550102 ORC5O43913 435 aa13.86□□□□□ -0.19
CHMP1A-208ENST00000550102 MRPS14O60783 128 aaKnown RBP13.86□□□□□ -0.19
CHMP1A-208ENST00000550102 BPNT1O95861 308 aa13.86□□□□□ -0.19
CHMP1A-208ENST00000550102 MT-ND4P03905 459 aa13.86□□□□□ -0.19
CHMP1A-208ENST00000550102 GLAP06280 429 aa13.86□□□□□ -0.19
CHMP1A-208ENST00000550102 KIR2DS4P43632 304 aa13.86□□□□□ -0.19
CHMP1A-208ENST00000550102 GNG10P50151 68 aa13.86□□□□□ -0.19
CHMP1A-208ENST00000550102 FABP5Q01469 135 aa13.86□□□□□ -0.19
CHMP1A-208ENST00000550102 UTF1Q5T230 341 aa13.86□□□□□ -0.19
CHMP1A-208ENST00000550102 CCBE1Q6UXH8 406 aaPredicted RBP13.86□□□□□ -0.19
CHMP1A-208ENST00000550102 SLC16A12Q6ZSM3 486 aa13.86□□□□□ -0.19
CHMP1A-208ENST00000550102 SVOPQ8N4V2 548 aa13.86□□□□□ -0.19
CHMP1A-208ENST00000550102 KCNG3Q8TAE7 436 aa13.86□□□□□ -0.19
CHMP1A-208ENST00000550102 CCDC107Q8WV48 283 aa13.86□□□□□ -0.19
CHMP1A-208ENST00000550102 TOMM40LQ969M1 308 aa13.86□□□□□ -0.19
CHMP1A-208ENST00000550102 ARL11Q969Q4 196 aa13.86□□□□□ -0.19
CHMP1A-208ENST00000550102 PLGRKTQ9HBL7 147 aa13.86□□□□□ -0.19
CHMP1A-208ENST00000550102 RAB9BQ9NP90 201 aa13.86□□□□□ -0.19
CHMP1A-208ENST00000550102 TRAPPC2LQ9UL33 140 aa13.86□□□□□ -0.19
CHMP1A-208ENST00000550102 WNK1Q9H4A3 2382 aa13.85□□□□□ -0.19
CHMP1A-208ENST00000550102 LY6LH3BQJ8 138 aa13.85□□□□□ -0.19
CHMP1A-208ENST00000550102 C15orf65H3BRN8 121 aa13.85□□□□□ -0.19
CHMP1A-208ENST00000550102 SDCBPO00560 298 aaPredicted RBP13.85□□□□□ -0.19
CHMP1A-208ENST00000550102 DENRO43583 198 aaKnown RBP13.85□□□□□ -0.19
CHMP1A-208ENST00000550102 IGHV3-7P01780 117 aa13.85□□□□□ -0.19
CHMP1A-208ENST00000550102 VSIG8P0DPA2 414 aa13.85□□□□□ -0.19
CHMP1A-208ENST00000550102 CALRP27797 417 aaKnown RBP13.85□□□□□ -0.19
CHMP1A-208ENST00000550102 MNDAP41218 407 aa13.85□□□□□ -0.19
CHMP1A-208ENST00000550102 EFNB2P52799 333 aa13.85□□□□□ -0.19
CHMP1A-208ENST00000550102 RPS27AP62979 156 aaKnown RBP13.85□□□□□ -0.19
CHMP1A-208ENST00000550102 MADCAM1Q13477 382 aa13.85□□□□□ -0.19
CHMP1A-208ENST00000550102 TMEM30BQ3MIR4 351 aa13.85□□□□□ -0.19
CHMP1A-208ENST00000550102 C6orf183Q5T699 404 aa13.85□□□□□ -0.19
CHMP1A-208ENST00000550102 SIGIRRQ6IA17 410 aa13.85□□□□□ -0.19
CHMP1A-208ENST00000550102 TRAT1Q6PIZ9 186 aa13.85□□□□□ -0.19
CHMP1A-208ENST00000550102 GAPTQ8N292 157 aa13.85□□□□□ -0.19
CHMP1A-208ENST00000550102 OR52M1Q8NGK5 317 aa13.85□□□□□ -0.19
CHMP1A-208ENST00000550102 RPEQ96AT9 228 aa13.85□□□□□ -0.19
CHMP1A-208ENST00000550102 NDUFB11Q9NX14 153 aa13.85□□□□□ -0.19
CHMP1A-208ENST00000550102 PSG11Q9UQ72 335 aa13.85□□□□□ -0.19
CHMP1A-208ENST00000550102 SIGLEC9Q9Y336 463 aa13.85□□□□□ -0.19
CHMP1A-208ENST00000550102 RRP15Q9Y3B9 282 aaKnown RBP13.85□□□□□ -0.19
CHMP1A-208ENST00000550102 SLC17A2O00624 439 aa13.84□□□□□ -0.19
CHMP1A-208ENST00000550102 TIMM23O14925 209 aa13.84□□□□□ -0.19
CHMP1A-208ENST00000550102 CD37P11049 281 aa13.84□□□□□ -0.19
CHMP1A-208ENST00000550102 KRTAP10-3P60369 221 aa13.84□□□□□ -0.19
CHMP1A-208ENST00000550102 EMX1Q04741 257 aaPredicted RBP13.84□□□□□ -0.19
CHMP1A-208ENST00000550102 RAB11BQ15907 218 aa13.84□□□□□ -0.19
CHMP1A-208ENST00000550102 SSX1Q16384 188 aa13.84□□□□□ -0.19
CHMP1A-208ENST00000550102 NKAPLQ5M9Q1 402 aa13.84□□□□□ -0.19
CHMP1A-208ENST00000550102 SYT6Q5T7P8 510 aaPredicted RBP13.84□□□□□ -0.19
CHMP1A-208ENST00000550102 OR10K2Q6IF99 312 aa13.84□□□□□ -0.19
CHMP1A-208ENST00000550102 C16orf82Q7Z2V1 217 aa13.84□□□□□ -0.19
CHMP1A-208ENST00000550102 OR10X1Q8NGY0 326 aa13.84□□□□□ -0.19
CHMP1A-208ENST00000550102 OR4K15Q8NH41 348 aa13.84□□□□□ -0.19
CHMP1A-208ENST00000550102 CAPSLQ8WWF8 208 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms