RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 RYR2Q92736 4967 aa12.07□□□□□ -0.48
RAB5C-205ENST00000550013 TMEM212A6NML5 194 aa12.06□□□□□ -0.48
RAB5C-205ENST00000550013 SEC14L6B5MCN3 397 aa12.06□□□□□ -0.48
RAB5C-205ENST00000550013 CDX1P47902 265 aaPredicted RBP12.06□□□□□ -0.48
RAB5C-205ENST00000550013 KCNJ3P48549 501 aa12.06□□□□□ -0.48
RAB5C-205ENST00000550013 FOXE3Q13461 319 aa12.06□□□□□ -0.48
RAB5C-205ENST00000550013 GALEQ14376 348 aa12.06□□□□□ -0.48
RAB5C-205ENST00000550013 RSU1Q15404 277 aa12.06□□□□□ -0.48
RAB5C-205ENST00000550013 ZIK1Q3SY52 487 aaPredicted RBP12.06□□□□□ -0.48
RAB5C-205ENST00000550013 MEDAGQ5VYS4 303 aa12.06□□□□□ -0.48
RAB5C-205ENST00000550013 RNF152Q8N8N0 203 aa12.06□□□□□ -0.48
RAB5C-205ENST00000550013 TMEM104Q8NE00 496 aa12.06□□□□□ -0.48
RAB5C-205ENST00000550013 Q8NFD4 153 aa12.06□□□□□ -0.48
RAB5C-205ENST00000550013 OR2T10Q8NGZ9 312 aa12.06□□□□□ -0.48
RAB5C-205ENST00000550013 OR5AK2Q8NH90 309 aa12.06□□□□□ -0.48
RAB5C-205ENST00000550013 HSPB9Q9BQS6 159 aa12.06□□□□□ -0.48
RAB5C-205ENST00000550013 FAM118AQ9NWS6 357 aa12.06□□□□□ -0.48
RAB5C-205ENST00000550013 TAS2R4Q9NYW5 299 aa12.06□□□□□ -0.48
RAB5C-205ENST00000550013 SORL1Q92673 2214 aa12.06□□□□□ -0.48
RAB5C-205ENST00000550013 IGHV3-43A0A0B4J1X8 118 aa12.05□□□□□ -0.48
RAB5C-205ENST00000550013 ZNF736B4DX44 427 aaPredicted RBP12.05□□□□□ -0.48
RAB5C-205ENST00000550013 C15orf65H3BRN8 121 aa12.05□□□□□ -0.48
RAB5C-205ENST00000550013 SDCBPO00560 298 aaPredicted RBP12.05□□□□□ -0.48
RAB5C-205ENST00000550013 MPZL2O60487 215 aa12.05□□□□□ -0.48
RAB5C-205ENST00000550013 CDRT1O95170 752 aa12.05□□□□□ -0.48
RAB5C-205ENST00000550013 ALPLP05186 524 aa12.05□□□□□ -0.48
RAB5C-205ENST00000550013 IGHV3-43DP0DP04 118 aa12.05□□□□□ -0.48
RAB5C-205ENST00000550013 RAB3AP20336 220 aa12.05□□□□□ -0.48
RAB5C-205ENST00000550013 SOX2P48431 317 aa12.05□□□□□ -0.48
RAB5C-205ENST00000550013 CFHR3Q02985 330 aa12.05□□□□□ -0.48
RAB5C-205ENST00000550013 ZNF529Q6P280 563 aa12.05□□□□□ -0.48
RAB5C-205ENST00000550013 ASCL4Q6XD76 172 aa12.05□□□□□ -0.48
RAB5C-205ENST00000550013 SYS1Q8N2H4 156 aa12.05□□□□□ -0.48
RAB5C-205ENST00000550013 RTN4IP1Q8WWV3 396 aaPredicted RBP12.05□□□□□ -0.48
RAB5C-205ENST00000550013 RGP1Q92546 391 aaPredicted RBP12.05□□□□□ -0.48
RAB5C-205ENST00000550013 ARL11Q969Q4 196 aa12.05□□□□□ -0.48
RAB5C-205ENST00000550013 ST6GALNAC6Q969X2 333 aa12.05□□□□□ -0.48
RAB5C-205ENST00000550013 MRPL48Q96GC5 212 aaKnown RBP12.05□□□□□ -0.48
RAB5C-205ENST00000550013 GON7Q9BXV9 100 aa12.05□□□□□ -0.48
RAB5C-205ENST00000550013 ST3GAL6Q9Y274 331 aa12.05□□□□□ -0.48
RAB5C-205ENST00000550013 SACSQ9NZJ4 4579 aa12.04□□□□□ -0.48
RAB5C-205ENST00000550013 TMEM30CPA0ZSE6 113 aa12.04□□□□□ -0.48
RAB5C-205ENST00000550013 SLC31A2O15432 143 aa12.04□□□□□ -0.48
RAB5C-205ENST00000550013 MAGEB3O15480 346 aa12.04□□□□□ -0.48
RAB5C-205ENST00000550013 OR7C1O76099 320 aaPredicted RBP12.04□□□□□ -0.48
RAB5C-205ENST00000550013 MOSP00540 346 aa12.04□□□□□ -0.48
RAB5C-205ENST00000550013 ELANEP08246 267 aa12.04□□□□□ -0.48
RAB5C-205ENST00000550013 GZMHP20718 246 aa12.04□□□□□ -0.48
RAB5C-205ENST00000550013 LINC00311Q8N616 119 aa12.04□□□□□ -0.48
RAB5C-205ENST00000550013 OR52M1Q8NGK5 317 aa12.04□□□□□ -0.48
RAB5C-205ENST00000550013 CCDC107Q8WV48 283 aa12.04□□□□□ -0.48
RAB5C-205ENST00000550013 CPNE2Q96FN4 548 aaPredicted RBP12.04□□□□□ -0.48
RAB5C-205ENST00000550013 S1PR3Q99500 378 aa12.04□□□□□ -0.48
RAB5C-205ENST00000550013 RASL11BQ9BPW5 248 aa12.04□□□□□ -0.48
RAB5C-205ENST00000550013 GFOD1Q9NXC2 390 aa12.04□□□□□ -0.48
RAB5C-205ENST00000550013 TENM2Q9NT68 2774 aa12.04□□□□□ -0.48
RAB5C-205ENST00000550013 C3orf84H3BNL1 204 aa12.03□□□□□ -0.48
RAB5C-205ENST00000550013 EI24O14681 340 aa12.03□□□□□ -0.48
RAB5C-205ENST00000550013 GEMIN2O14893 280 aaKnown RBP12.03□□□□□ -0.48
RAB5C-205ENST00000550013 IGHG4P01861 327 aa12.03□□□□□ -0.48
RAB5C-205ENST00000550013 GABRB1P18505 474 aa12.03□□□□□ -0.48
RAB5C-205ENST00000550013 CD1BP29016 333 aa12.03□□□□□ -0.48
RAB5C-205ENST00000550013 GTF2A1P52655 376 aaPredicted RBP12.03□□□□□ -0.48
RAB5C-205ENST00000550013 F2RL1P55085 397 aa12.03□□□□□ -0.48
RAB5C-205ENST00000550013 RBM11P57052 281 aaKnown RBP12.03□□□□□ -0.48
RAB5C-205ENST00000550013 FHL3Q13643 280 aa12.03□□□□□ -0.48
RAB5C-205ENST00000550013 ZNF260Q3ZCT1 412 aa12.03□□□□□ -0.48
RAB5C-205ENST00000550013 OR52N1Q8NH53 320 aa12.03□□□□□ -0.48
RAB5C-205ENST00000550013 C4orf3Q8WVX3 66 aa12.03□□□□□ -0.48
RAB5C-205ENST00000550013 JAM3Q9BX67 310 aa12.03□□□□□ -0.48
RAB5C-205ENST00000550013 IFT22Q9H7X7 185 aa12.03□□□□□ -0.48
RAB5C-205ENST00000550013 AMBNQ9NP70 447 aa12.03□□□□□ -0.48
RAB5C-205ENST00000550013 ERVK13-1Q9NX77 482 aa12.03□□□□□ -0.48
RAB5C-205ENST00000550013 ING4Q9UNL4 249 aa12.03□□□□□ -0.48
RAB5C-205ENST00000550013 ORC6Q9Y5N6 252 aa12.03□□□□□ -0.48
RAB5C-205ENST00000550013 SNTNA6NMZ2 147 aa12.02□□□□□ -0.49
RAB5C-205ENST00000550013 RRP9O43818 475 aaKnown RBP12.02□□□□□ -0.49
RAB5C-205ENST00000550013 RPSAP08865 295 aaKnown RBP12.02□□□□□ -0.49
RAB5C-205ENST00000550013 VDAC1P21796 283 aa12.02□□□□□ -0.49
RAB5C-205ENST00000550013 IL3RAP26951 378 aa12.02□□□□□ -0.49
RAB5C-205ENST00000550013 GBX2P52951 348 aaPredicted RBP12.02□□□□□ -0.49
RAB5C-205ENST00000550013 NHLRC3Q5JS37 347 aa12.02□□□□□ -0.49
RAB5C-205ENST00000550013 ATAD3CQ5T2N8 411 aa12.02□□□□□ -0.49
RAB5C-205ENST00000550013 FAM71E2Q8N5Q1 922 aa12.02□□□□□ -0.49
RAB5C-205ENST00000550013 C8orf31Q8N9H6 132 aa12.02□□□□□ -0.49
RAB5C-205ENST00000550013 PYDC1Q8WXC3 89 aa12.02□□□□□ -0.49
RAB5C-205ENST00000550013 KCTD7Q96MP8 289 aa12.02□□□□□ -0.49
RAB5C-205ENST00000550013 METTL9Q9H1A3 318 aa12.02□□□□□ -0.49
RAB5C-205ENST00000550013 IL36GQ9NZH8 169 aa12.02□□□□□ -0.49
RAB5C-205ENST00000550013 ZNF256Q9Y2P7 627 aaPredicted RBP12.02□□□□□ -0.49
RAB5C-205ENST00000550013 A0A1W2PP11 408 aa12.01□□□□□ -0.49
RAB5C-205ENST00000550013 LY86O95711 162 aa12.01□□□□□ -0.49
RAB5C-205ENST00000550013 FADS2O95864 444 aaKnown RBP12.01□□□□□ -0.49
RAB5C-205ENST00000550013 MT-ND4P03905 459 aa12.01□□□□□ -0.49
RAB5C-205ENST00000550013 SERPINA2P20848 420 aa12.01□□□□□ -0.49
RAB5C-205ENST00000550013 PSMB8P28062 276 aa12.01□□□□□ -0.49
RAB5C-205ENST00000550013 SOX6P35712 828 aa12.01□□□□□ -0.49
RAB5C-205ENST00000550013 XAF1Q6GPH4 301 aa12.01□□□□□ -0.49
RAB5C-205ENST00000550013 ZNF497Q6ZNH5 498 aa12.01□□□□□ -0.49
RAB5C-205ENST00000550013 ZNF439Q8NDP4 499 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms