RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 KCNK15Q9H427 330 aa12.62□□□□□ -0.39
COX6A1-203ENST00000550009 NKX1-2Q9UD57 310 aaPredicted RBP12.62□□□□□ -0.39
COX6A1-203ENST00000550009 PSORS1C1Q9UIG5 152 aa12.62□□□□□ -0.39
COX6A1-203ENST00000550009 TCRBV4S1A1TA0A5B7 111 aa12.61□□□□□ -0.39
COX6A1-203ENST00000550009 ZNF736B4DX44 427 aaPredicted RBP12.61□□□□□ -0.39
COX6A1-203ENST00000550009 IGKV1D-33P01593 117 aa12.61□□□□□ -0.39
COX6A1-203ENST00000550009 IGKV1-33P01594 117 aa12.61□□□□□ -0.39
COX6A1-203ENST00000550009 MT-ND4P03905 459 aa12.61□□□□□ -0.39
COX6A1-203ENST00000550009 CAPGP40121 348 aa12.61□□□□□ -0.39
COX6A1-203ENST00000550009 LOXL3P58215 753 aa12.61□□□□□ -0.39
COX6A1-203ENST00000550009 PAX5Q02548 391 aa12.61□□□□□ -0.39
COX6A1-203ENST00000550009 EMX1Q04741 257 aaPredicted RBP12.61□□□□□ -0.39
COX6A1-203ENST00000550009 Q499Y3 187 aa12.61□□□□□ -0.39
COX6A1-203ENST00000550009 OGFRL1Q5TC84 451 aaPredicted RBP12.61□□□□□ -0.39
COX6A1-203ENST00000550009 TTC23Q5W5X9 447 aa12.61□□□□□ -0.39
COX6A1-203ENST00000550009 SIGIRRQ6IA17 410 aa12.61□□□□□ -0.39
COX6A1-203ENST00000550009 GLIPR1L1Q6UWM5 242 aa12.61□□□□□ -0.39
COX6A1-203ENST00000550009 C16orf82Q7Z2V1 217 aa12.61□□□□□ -0.39
COX6A1-203ENST00000550009 JAGN1Q8N5M9 183 aa12.61□□□□□ -0.39
COX6A1-203ENST00000550009 BPIFB6Q8NFQ5 453 aa12.61□□□□□ -0.39
COX6A1-203ENST00000550009 OR4K15Q8NH41 348 aa12.61□□□□□ -0.39
COX6A1-203ENST00000550009 FBLIM1Q8WUP2 373 aa12.61□□□□□ -0.39
COX6A1-203ENST00000550009 ARL11Q969Q4 196 aa12.61□□□□□ -0.39
COX6A1-203ENST00000550009 DERL3Q96Q80 235 aa12.61□□□□□ -0.39
COX6A1-203ENST00000550009 NCOR1P1Q9H4R4 102 aa12.61□□□□□ -0.39
COX6A1-203ENST00000550009 IFT22Q9H7X7 185 aa12.61□□□□□ -0.39
COX6A1-203ENST00000550009 MRPS28Q9Y2Q9 187 aaKnown RBP12.61□□□□□ -0.39
COX6A1-203ENST00000550009 GPX5O75715 221 aa12.6□□□□□ -0.39
COX6A1-203ENST00000550009 CSTBP04080 98 aaKnown RBP12.6□□□□□ -0.39
COX6A1-203ENST00000550009 CELP19835 753 aa12.6□□□□□ -0.39
COX6A1-203ENST00000550009 CEACAM3P40198 252 aa12.6□□□□□ -0.39
COX6A1-203ENST00000550009 ZNF134P52741 427 aa12.6□□□□□ -0.39
COX6A1-203ENST00000550009 HES1Q14469 280 aa12.6□□□□□ -0.39
COX6A1-203ENST00000550009 FOXB2Q5VYV0 432 aa12.6□□□□□ -0.39
COX6A1-203ENST00000550009 ZNF497Q6ZNH5 498 aa12.6□□□□□ -0.39
COX6A1-203ENST00000550009 C5orf56Q8N8D9 126 aa12.6□□□□□ -0.39
COX6A1-203ENST00000550009 OR1L1Q8NH94 360 aa12.6□□□□□ -0.39
COX6A1-203ENST00000550009 PAK1IP1Q9NWT1 392 aaPredicted RBP12.6□□□□□ -0.39
COX6A1-203ENST00000550009 AURKAIP1Q9NWT8 199 aaPredicted RBP12.6□□□□□ -0.39
COX6A1-203ENST00000550009 MOB4Q9Y3A3 225 aa12.6□□□□□ -0.39
COX6A1-203ENST00000550009 HSPE1-MOB4S4R3N1 261 aa12.6□□□□□ -0.39
COX6A1-203ENST00000550009 TMEM30CPA0ZSE6 113 aa12.59□□□□□ -0.39
COX6A1-203ENST00000550009 C12orf77C9JDV5 145 aa12.59□□□□□ -0.39
COX6A1-203ENST00000550009 HSD17B6O14756 317 aa12.59□□□□□ -0.39
COX6A1-203ENST00000550009 TMEM11P17152 192 aa12.59□□□□□ -0.39
COX6A1-203ENST00000550009 RCC1P18754 421 aaPredicted RBP12.59□□□□□ -0.39
COX6A1-203ENST00000550009 FSTP19883 344 aa12.59□□□□□ -0.39
COX6A1-203ENST00000550009 MNDAP41218 407 aa12.59□□□□□ -0.39
COX6A1-203ENST00000550009 MADCAM1Q13477 382 aa12.59□□□□□ -0.39
COX6A1-203ENST00000550009 YIF1BQ5BJH7 314 aa12.59□□□□□ -0.39
COX6A1-203ENST00000550009 KHDC1LQ5JSQ8 128 aa12.59□□□□□ -0.39
COX6A1-203ENST00000550009 OR10K2Q6IF99 312 aa12.59□□□□□ -0.39
COX6A1-203ENST00000550009 ETV3LQ6ZN32 361 aa12.59□□□□□ -0.39
COX6A1-203ENST00000550009 LCNL1Q6ZST4 164 aa12.59□□□□□ -0.39
COX6A1-203ENST00000550009 MOB3BQ86TA1 216 aa12.59□□□□□ -0.39
COX6A1-203ENST00000550009 PACRGLQ8N7B6 248 aa12.59□□□□□ -0.39
COX6A1-203ENST00000550009 SETD9Q8NE22 299 aa12.59□□□□□ -0.39
COX6A1-203ENST00000550009 OR4F17Q8NGA8 305 aa12.59□□□□□ -0.39
COX6A1-203ENST00000550009 OR10V1Q8NGI7 309 aa12.59□□□□□ -0.39
COX6A1-203ENST00000550009 OR10X1Q8NGY0 326 aa12.59□□□□□ -0.39
COX6A1-203ENST00000550009 HAVCR2Q8TDQ0 301 aa12.59□□□□□ -0.39
COX6A1-203ENST00000550009 NEK7Q8TDX7 302 aa12.59□□□□□ -0.39
COX6A1-203ENST00000550009 FAM46BQ96A09 425 aa12.59□□□□□ -0.39
COX6A1-203ENST00000550009 OR4F4Q96R69 305 aa12.59□□□□□ -0.39
COX6A1-203ENST00000550009 FKBP14Q9NWM8 211 aa12.59□□□□□ -0.39
COX6A1-203ENST00000550009 IGHV1-3A0A0C4DH29 117 aa12.58□□□□□ -0.4
COX6A1-203ENST00000550009 IRGMA1A4Y4 181 aa12.58□□□□□ -0.4
COX6A1-203ENST00000550009 UBE2QL1A1L167 161 aa12.58□□□□□ -0.4
COX6A1-203ENST00000550009 OOSP1A8MZH6 123 aa12.58□□□□□ -0.4
COX6A1-203ENST00000550009 AIPO00170 330 aa12.58□□□□□ -0.4
COX6A1-203ENST00000550009 SDCBPO00560 298 aaPredicted RBP12.58□□□□□ -0.4
COX6A1-203ENST00000550009 GNMTQ14749 295 aa12.58□□□□□ -0.4
COX6A1-203ENST00000550009 MPV17LQ2QL34 196 aa12.58□□□□□ -0.4
COX6A1-203ENST00000550009 SYT6Q5T7P8 510 aaPredicted RBP12.58□□□□□ -0.4
COX6A1-203ENST00000550009 C8orf59Q8N0T1 100 aaPredicted RBP12.58□□□□□ -0.4
COX6A1-203ENST00000550009 PRR18Q8N4B5 295 aa12.58□□□□□ -0.4
COX6A1-203ENST00000550009 NANOGP1Q8N7R0 232 aa12.58□□□□□ -0.4
COX6A1-203ENST00000550009 NRG4Q8WWG1 115 aa12.58□□□□□ -0.4
COX6A1-203ENST00000550009 CPNE2Q96FN4 548 aaPredicted RBP12.58□□□□□ -0.4
COX6A1-203ENST00000550009 DUX3Q96PT4 197 aa12.58□□□□□ -0.4
COX6A1-203ENST00000550009 GFOD1Q9NXC2 390 aa12.58□□□□□ -0.4
COX6A1-203ENST00000550009 RCC2Q9P258 522 aaKnown RBP12.58□□□□□ -0.4
COX6A1-203ENST00000550009 AMMECR1Q9Y4X0 333 aaPredicted RBP12.58□□□□□ -0.4
COX6A1-203ENST00000550009 EFCAB10A6NFE3 127 aa12.57□□□□□ -0.4
COX6A1-203ENST00000550009 CCRL2O00421 344 aa12.57□□□□□ -0.4
COX6A1-203ENST00000550009 CASQ2O14958 399 aaPredicted RBP12.57□□□□□ -0.4
COX6A1-203ENST00000550009 FAM106CPP0CH98 169 aa12.57□□□□□ -0.4
COX6A1-203ENST00000550009 PF4V1P10720 104 aa12.57□□□□□ -0.4
COX6A1-203ENST00000550009 GTF2F2P13984 249 aa12.57□□□□□ -0.4
COX6A1-203ENST00000550009 CD33P20138 364 aa12.57□□□□□ -0.4
COX6A1-203ENST00000550009 KCNJ3P48549 501 aa12.57□□□□□ -0.4
COX6A1-203ENST00000550009 WNT4P56705 351 aa12.57□□□□□ -0.4
COX6A1-203ENST00000550009 KRTAP10-11P60412 298 aa12.57□□□□□ -0.4
COX6A1-203ENST00000550009 AWAT2Q6E213 333 aa12.57□□□□□ -0.4
COX6A1-203ENST00000550009 RAB12Q6IQ22 244 aa12.57□□□□□ -0.4
COX6A1-203ENST00000550009 CCDC144NLQ6NUI1 221 aa12.57□□□□□ -0.4
COX6A1-203ENST00000550009 THNSL2Q86YJ6 484 aa12.57□□□□□ -0.4
COX6A1-203ENST00000550009 STX19Q8N4C7 294 aa12.57□□□□□ -0.4
COX6A1-203ENST00000550009 DTX3Q8N9I9 347 aa12.57□□□□□ -0.4
COX6A1-203ENST00000550009 ZNF439Q8NDP4 499 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms