RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 SSTR2P30874 369 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 FAUP35544 74 aaKnown RBP6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 GLIPR1P48060 266 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 KCNJ3P48549 501 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 BTG1P62324 171 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 HLA-DRB3P79483 266 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 MRPS11P82912 194 aaKnown RBP6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 MRPS15P82914 257 aaKnown RBP6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 HERPUD1Q15011 391 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 CDK10Q15131 360 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 GRK1Q15835 563 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 SRSF7Q16629 238 aaKnown RBP eCLIP6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 ACTBL2Q562R1 376 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 RNASE10Q5GAN6 216 aaKnown RBP6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 KRBOX4Q5JUW0 171 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 VAX1Q5SQQ9 334 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 AVPI1Q5T686 147 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 SLC35E4Q6ICL7 350 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 OR5AP2Q8NGF4 316 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 OR51S1Q8NGJ8 323 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 OR13C8Q8NGS7 320 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 OR5H2Q8NGV7 314 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 ENKURQ8TC29 256 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 CCDC107Q8WV48 283 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 C14orf79Q96F83 325 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 CCL19Q99731 98 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 DCTN5Q9BTE1 182 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 DNTTIP1Q9H147 329 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 ZNF665Q9H7R5 613 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 ZNF286AQ9HBT8 521 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 DLL4Q9NR61 685 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 MCUBQ9NWR8 336 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 SLC2A8Q9NY64 477 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 EHFQ9NZC4 300 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 ANXA10Q9UJ72 324 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 ARID1AO14497 2285 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 MALRD1Q5VYJ5 2156 aa6.71□□□□□ -1.33
DEPDC4-207ENST00000549249 A0A0B4J293 547 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 TMEM30CPA0ZSE6 113 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 MEX3AA1L020 520 aaKnown RBP6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 NKX6-3A6NJ46 265 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 CENPXA8MT69 81 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 TRDCB7Z8K6 153 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 SDCBPO00560 298 aaPredicted RBP6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 FABP7O15540 132 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 ADAM20O43506 726 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 NDUFB6O95139 128 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 FSTL3O95633 263 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 IGHV4-39P01824 125 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 AMY2AP04746 511 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 EFNA4P52798 201 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 RIPPLY3P57055 190 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 TAS2R46P59540 309 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 KRTAP10-9P60411 292 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 IL13RA1P78552 427 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 EDDM3AQ14507 147 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 MEF2DQ14814 521 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 HMGN3Q15651 99 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 IGSF11Q5DX21 431 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 ZNF660Q6AZW8 331 aaPredicted RBP6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 ZNF782Q6ZMW2 699 aaPredicted RBP6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 BTN2A1Q7KYR7 527 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 MOB1BQ7L9L4 216 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 TCF23Q7RTU1 214 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 OVCH2Q7RTZ1 564 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 LHFPL1Q86WI0 220 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 TMEM185AQ8NFB2 350 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 OR13A1Q8NGR1 328 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 UBALD1Q8TB05 177 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 MARVELD1Q9BSK0 173 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 CABLES2Q9BTV7 478 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 FAM234AQ9H0X4 552 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 DPAGT1Q9H3H5 408 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 RIMS4Q9H426 269 aaPredicted RBP6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 CHODLQ9H9P2 273 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 MYOZ1Q9NP98 299 aaPredicted RBP6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 KAAG1Q9UBP8 84 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 FLVCR2Q9UPI3 526 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 LRBAP50851 2863 aa6.71□□□□□ -1.34
DEPDC4-207ENST00000549249 hCG_2014768A0A024R1R8 64 aa6.7□□□□□ -1.34
DEPDC4-207ENST00000549249 MEIKINA0A087WXM9 373 aa6.7□□□□□ -1.34
DEPDC4-207ENST00000549249 ODAMA1E959 279 aa6.7□□□□□ -1.34
DEPDC4-207ENST00000549249 CEACAM18A8MTB9 384 aa6.7□□□□□ -1.34
DEPDC4-207ENST00000549249 DISC1C4P0D8 188 aa6.7□□□□□ -1.34
DEPDC4-207ENST00000549249 C15orf65H3BRN8 121 aa6.7□□□□□ -1.34
DEPDC4-207ENST00000549249 H7C1Q1 480 aa6.7□□□□□ -1.34
DEPDC4-207ENST00000549249 TMPRSS2O15393 492 aa6.7□□□□□ -1.34
DEPDC4-207ENST00000549249 GLP1RP43220 463 aa6.7□□□□□ -1.34
DEPDC4-207ENST00000549249 OR3A3P47888 321 aa6.7□□□□□ -1.34
DEPDC4-207ENST00000549249 P2RX3P56373 397 aa6.7□□□□□ -1.34
DEPDC4-207ENST00000549249 ARPC4P59998 168 aa6.7□□□□□ -1.34
DEPDC4-207ENST00000549249 RBMS2Q15434 407 aaKnown RBP6.7□□□□□ -1.34
DEPDC4-207ENST00000549249 CR1LQ2VPA4 569 aa6.7□□□□□ -1.34
DEPDC4-207ENST00000549249 CHRFAM7AQ494W8 412 aa6.7□□□□□ -1.34
DEPDC4-207ENST00000549249 SCGB2B2Q4G0G5 96 aa6.7□□□□□ -1.34
DEPDC4-207ENST00000549249 AADACL3Q5VUY0 350 aa6.7□□□□□ -1.34
DEPDC4-207ENST00000549249 FAM53AQ6NSI3 398 aaPredicted RBP6.7□□□□□ -1.34
DEPDC4-207ENST00000549249 PLET1Q6UQ28 207 aa6.7□□□□□ -1.34
DEPDC4-207ENST00000549249 ZNF841Q6ZN19 808 aa6.7□□□□□ -1.34
DEPDC4-207ENST00000549249 IDO2Q6ZQW0 420 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms