RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 TRBV6-7A0A0A0MS04 114 aa13.99□□□□□ -0.17
CHMP1A-204ENST00000547687 C16orf97H3BN30 126 aa13.99□□□□□ -0.17
CHMP1A-204ENST00000547687 HSPB6O14558 160 aa13.99□□□□□ -0.17
CHMP1A-204ENST00000547687 RHBDL1O75783 438 aa13.99□□□□□ -0.17
CHMP1A-204ENST00000547687 UCP3P55916 312 aa13.99□□□□□ -0.17
CHMP1A-204ENST00000547687 HERV-K104P61576 105 aa13.99□□□□□ -0.17
CHMP1A-204ENST00000547687 IGSF11Q5DX21 431 aa13.99□□□□□ -0.17
CHMP1A-204ENST00000547687 UNQ6126/PRO20091Q6UXV3 157 aa13.99□□□□□ -0.17
CHMP1A-204ENST00000547687 SUMF2Q8NBJ7 301 aa13.99□□□□□ -0.17
CHMP1A-204ENST00000547687 POC1AQ8NBT0 407 aa13.99□□□□□ -0.17
CHMP1A-204ENST00000547687 ST8SIA2Q92186 375 aa13.99□□□□□ -0.17
CHMP1A-204ENST00000547687 RRASP10301 218 aa13.98□□□□□ -0.17
CHMP1A-204ENST00000547687 SELEP16581 610 aa13.98□□□□□ -0.17
CHMP1A-204ENST00000547687 AADACP22760 399 aa13.98□□□□□ -0.17
CHMP1A-204ENST00000547687 RBM39Q14498 530 aaKnown RBP13.98□□□□□ -0.17
CHMP1A-204ENST00000547687 IL13RA2Q14627 380 aa13.98□□□□□ -0.17
CHMP1A-204ENST00000547687 SLC38A6Q8IZM9 456 aa13.98□□□□□ -0.17
CHMP1A-204ENST00000547687 SPERTQ8NA61 448 aa13.98□□□□□ -0.17
CHMP1A-204ENST00000547687 OR5T2Q8NGG2 359 aa13.98□□□□□ -0.17
CHMP1A-204ENST00000547687 RTN4IP1Q8WWV3 396 aaPredicted RBP13.98□□□□□ -0.17
CHMP1A-204ENST00000547687 BCL2L14Q9BZR8 327 aa13.98□□□□□ -0.17
CHMP1A-204ENST00000547687 NAA60Q9H7X0 242 aa13.98□□□□□ -0.17
CHMP1A-204ENST00000547687 GSKIPQ9P0R6 139 aa13.98□□□□□ -0.17
CHMP1A-204ENST00000547687 ROS1P08922 2347 aa13.98□□□□□ -0.17
CHMP1A-204ENST00000547687 LRP5LA4QPB2 252 aa13.98□□□□□ -0.17
CHMP1A-204ENST00000547687 IQCF6A8MYZ5 107 aa13.98□□□□□ -0.17
CHMP1A-204ENST00000547687 H0YIZ8 118 aa13.98□□□□□ -0.17
CHMP1A-204ENST00000547687 HS3ST1O14792 307 aa13.98□□□□□ -0.17
CHMP1A-204ENST00000547687 KCNAB3O43448 404 aa13.98□□□□□ -0.17
CHMP1A-204ENST00000547687 PHLDA2Q53GA4 152 aa13.98□□□□□ -0.17
CHMP1A-204ENST00000547687 FAM76BQ5HYJ3 339 aa13.98□□□□□ -0.17
CHMP1A-204ENST00000547687 LRRC46Q96FV0 321 aa13.98□□□□□ -0.17
CHMP1A-204ENST00000547687 SYT3Q9BQG1 590 aa13.98□□□□□ -0.17
CHMP1A-204ENST00000547687 RHOFQ9HBH0 211 aa13.98□□□□□ -0.17
CHMP1A-204ENST00000547687 FZR1Q9UM11 496 aa13.98□□□□□ -0.17
CHMP1A-204ENST00000547687 PPYP01298 95 aa13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 RLN2P04090 185 aa13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 NMBP08949 121 aa13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 FABP6P51161 128 aa13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 IL15RAQ13261 267 aa13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 PRSS54Q6PEW0 395 aa13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 WDR86Q86TI4 376 aa13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 SCCPDHQ8NBX0 429 aa13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 GTF3AQ92664 365 aaKnown RBP13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 ADAT1Q9BUB4 502 aaKnown RBP13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 RSRP1Q9BUV0 290 aa13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 ZNF471Q9BX82 626 aaPredicted RBP13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 RIMS4Q9H426 269 aaPredicted RBP13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 SLC2A9Q9NRM0 540 aa13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 TRAV24A0A0B4J272 114 aa13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 TRDCB7Z8K6 153 aa13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 C3orf80F5H4A9 247 aa13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 IFNA21P01568 189 aa13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 CRYAAP02489 173 aa13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 GLAP06280 429 aa13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 SCTP09683 121 aa13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 LYL1P12980 280 aa13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 TMEM187Q14656 261 aa13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 C3orf36Q3SXR2 165 aa13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 SP6Q3SY56 376 aa13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 C5orf24Q7Z6I8 188 aa13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 RDH5Q92781 318 aa13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 GALNT14Q96FL9 552 aa13.97□□□□□ -0.17
CHMP1A-204ENST00000547687 KIR2DS1A0A191URI9 304 aa13.96□□□□□ -0.17
CHMP1A-204ENST00000547687 POM121CA8CG34 1229 aa13.96□□□□□ -0.17
CHMP1A-204ENST00000547687 DEGS1O15121 323 aa13.96□□□□□ -0.17
CHMP1A-204ENST00000547687 DIRAS3O95661 229 aa13.96□□□□□ -0.17
CHMP1A-204ENST00000547687 TK1P04183 234 aa13.96□□□□□ -0.17
CHMP1A-204ENST00000547687 OR5AC1P0C628 307 aa13.96□□□□□ -0.17
CHMP1A-204ENST00000547687 TUBG1P23258 451 aa13.96□□□□□ -0.17
CHMP1A-204ENST00000547687 KIR2DS4P43632 304 aa13.96□□□□□ -0.17
CHMP1A-204ENST00000547687 LUMP51884 338 aaPredicted RBP13.96□□□□□ -0.17
CHMP1A-204ENST00000547687 RAB32Q13637 225 aa13.96□□□□□ -0.17
CHMP1A-204ENST00000547687 KIR2DS1Q14954 304 aa13.96□□□□□ -0.17
CHMP1A-204ENST00000547687 IAH1Q2TAA2 248 aaPredicted RBP13.96□□□□□ -0.17
CHMP1A-204ENST00000547687 RGS7BPQ6MZT1 257 aaPredicted RBP13.96□□□□□ -0.17
CHMP1A-204ENST00000547687 LURAP1LQ8IV03 231 aa13.96□□□□□ -0.17
CHMP1A-204ENST00000547687 SUCNR1Q9BXA5 334 aa13.96□□□□□ -0.17
CHMP1A-204ENST00000547687 IFT22Q9H7X7 185 aa13.96□□□□□ -0.17
CHMP1A-204ENST00000547687 TUBG2Q9NRH3 451 aa13.96□□□□□ -0.17
CHMP1A-204ENST00000547687 OR5AC2Q9NZP5 309 aa13.96□□□□□ -0.17
CHMP1A-204ENST00000547687 PURGQ9UJV8 347 aaKnown RBP13.96□□□□□ -0.17
CHMP1A-204ENST00000547687 POLDIP2Q9Y2S7 368 aa13.96□□□□□ -0.17
CHMP1A-204ENST00000547687 HIVEP1P15822 2718 aa13.96□□□□□ -0.17
CHMP1A-204ENST00000547687 LOC105371267A0A1B0GV96 52 aa13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 F5H0A9 414 aaPredicted RBP13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 BET1O15155 118 aa13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 PET100P0DJ07 73 aa13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 NUP62P37198 522 aaPredicted RBP13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 OR8G1Q15617 311 aa13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 ZNF718Q3SXZ3 478 aa13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 GGNBP1Q5YKI7 109 aa13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 Q8IYB0 196 aa13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 CCDC71LQ8N9Z2 235 aa13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 OR11L1Q8NGX0 322 aa13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 MRPL30Q8TCC3 161 aaKnown RBP13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 MRPL24Q96A35 216 aaKnown RBP13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 RRNAD1Q96FB5 475 aaKnown RBP13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 RASL12Q9NYN1 266 aa13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 ZMAT5Q9UDW3 170 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms