RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 BAMBIQ13145 260 aa13.69□□□□□ -0.22
CCDC38-203ENST00000546803 ZNF626Q68DY1 528 aa13.69□□□□□ -0.22
CCDC38-203ENST00000546803 Q6YL49 198 aa13.69□□□□□ -0.22
CCDC38-203ENST00000546803 Q6ZTK2 550 aa13.69□□□□□ -0.22
CCDC38-203ENST00000546803 ZNF554Q86TJ5 538 aa13.69□□□□□ -0.22
CCDC38-203ENST00000546803 CCDC107Q8WV48 283 aa13.69□□□□□ -0.22
CCDC38-203ENST00000546803 ZFAND2BQ8WV99 257 aa13.69□□□□□ -0.22
CCDC38-203ENST00000546803 DYRK2Q92630 601 aa13.69□□□□□ -0.22
CCDC38-203ENST00000546803 KIRREL1Q96J84 757 aa13.69□□□□□ -0.22
CCDC38-203ENST00000546803 ZMAT3Q9HA38 289 aaKnown RBP13.69□□□□□ -0.22
CCDC38-203ENST00000546803 IDI2-AS1Q9NZ38 188 aa13.69□□□□□ -0.22
CCDC38-203ENST00000546803 TBL2Q9Y4P3 447 aaKnown RBP13.69□□□□□ -0.22
CCDC38-203ENST00000546803 SETD2Q9BYW2 2564 aaPredicted RBP13.69□□□□□ -0.22
CCDC38-203ENST00000546803 IGHV2-26A0A0B4J1V2 119 aa13.68□□□□□ -0.22
CCDC38-203ENST00000546803 TRAV39A0A0B4J263 110 aa13.68□□□□□ -0.22
CCDC38-203ENST00000546803 MDFIC2A0A1B0GVS7 189 aa13.68□□□□□ -0.22
CCDC38-203ENST00000546803 POM121CA8CG34 1229 aa13.68□□□□□ -0.22
CCDC38-203ENST00000546803 ODF3BA8MYP8 253 aa13.68□□□□□ -0.22
CCDC38-203ENST00000546803 CLDN34H7C241 214 aa13.68□□□□□ -0.22
CCDC38-203ENST00000546803 TRIM77I1YAP6 450 aa13.68□□□□□ -0.22
CCDC38-203ENST00000546803 GABARAPO95166 117 aa13.68□□□□□ -0.22
CCDC38-203ENST00000546803 ARG1P05089 322 aa13.68□□□□□ -0.22
CCDC38-203ENST00000546803 OMGP23515 440 aa13.68□□□□□ -0.22
CCDC38-203ENST00000546803 EFNB2P52799 333 aa13.68□□□□□ -0.22
CCDC38-203ENST00000546803 TMEM50BP56557 158 aa13.68□□□□□ -0.22
CCDC38-203ENST00000546803 PLA2G7Q13093 441 aa13.68□□□□□ -0.22
CCDC38-203ENST00000546803 TMEM30BQ3MIR4 351 aa13.68□□□□□ -0.22
CCDC38-203ENST00000546803 IDNKQ5T6J7 187 aa13.68□□□□□ -0.22
CCDC38-203ENST00000546803 SLC16A12Q6ZSM3 486 aa13.68□□□□□ -0.22
CCDC38-203ENST00000546803 LDLRAD3Q86YD5 345 aa13.68□□□□□ -0.22
CCDC38-203ENST00000546803 ABHD12Q8N2K0 398 aa13.68□□□□□ -0.22
CCDC38-203ENST00000546803 ZDHHC22Q8N966 263 aa13.68□□□□□ -0.22
CCDC38-203ENST00000546803 OR4K15Q8NH41 348 aa13.68□□□□□ -0.22
CCDC38-203ENST00000546803 ARL11Q969Q4 196 aa13.68□□□□□ -0.22
CCDC38-203ENST00000546803 MBNL3Q9NUK0 354 aaKnown RBP13.68□□□□□ -0.22
CCDC38-203ENST00000546803 ETV7Q9Y603 341 aa13.68□□□□□ -0.22
CCDC38-203ENST00000546803 C15orf65H3BRN8 121 aa13.67□□□□□ -0.22
CCDC38-203ENST00000546803 SPINT2O43291 252 aa13.67□□□□□ -0.22
CCDC38-203ENST00000546803 SCGNO76038 276 aa13.67□□□□□ -0.22
CCDC38-203ENST00000546803 SNRPBP14678 240 aaKnown RBP13.67□□□□□ -0.22
CCDC38-203ENST00000546803 SSTR5P35346 364 aa13.67□□□□□ -0.22
CCDC38-203ENST00000546803 TGFBR1P36897 503 aa13.67□□□□□ -0.22
CCDC38-203ENST00000546803 RPS19P39019 145 aaKnown RBP13.67□□□□□ -0.22
CCDC38-203ENST00000546803 GDNFP39905 211 aa13.67□□□□□ -0.22
CCDC38-203ENST00000546803 RPL5P46777 297 aaKnown RBP13.67□□□□□ -0.22
CCDC38-203ENST00000546803 NCS1P62166 190 aa13.67□□□□□ -0.22
CCDC38-203ENST00000546803 DYNC1I2Q13409 638 aaKnown RBP13.67□□□□□ -0.22
CCDC38-203ENST00000546803 MINOS1Q5TGZ0 78 aa13.67□□□□□ -0.22
CCDC38-203ENST00000546803 GPR107Q5VW38 600 aa13.67□□□□□ -0.22
CCDC38-203ENST00000546803 TMEM86BQ8N661 226 aa13.67□□□□□ -0.22
CCDC38-203ENST00000546803 OR52M1Q8NGK5 317 aa13.67□□□□□ -0.22
CCDC38-203ENST00000546803 OR10R2Q8NGX6 335 aa13.67□□□□□ -0.22
CCDC38-203ENST00000546803 RFESDQ8TAC1 157 aa13.67□□□□□ -0.22
CCDC38-203ENST00000546803 ZNF596Q8TC21 504 aa13.67□□□□□ -0.22
CCDC38-203ENST00000546803 MRPL30Q8TCC3 161 aaKnown RBP13.67□□□□□ -0.22
CCDC38-203ENST00000546803 LGALS14Q8TCE9 139 aa13.67□□□□□ -0.22
CCDC38-203ENST00000546803 RAB3CQ96E17 227 aa13.67□□□□□ -0.22
CCDC38-203ENST00000546803 ARHGAP5-AS1Q96IT6 56 aa13.67□□□□□ -0.22
CCDC38-203ENST00000546803 PECRQ9BY49 303 aa13.67□□□□□ -0.22
CCDC38-203ENST00000546803 ESM1Q9NQ30 184 aa13.67□□□□□ -0.22
CCDC38-203ENST00000546803 KCNIP1Q9NZI2 227 aa13.67□□□□□ -0.22
CCDC38-203ENST00000546803 ABRACLQ9P1F3 81 aa13.67□□□□□ -0.22
CCDC38-203ENST00000546803 MINOS1-NBL1R4GNA1 71 aa13.67□□□□□ -0.22
CCDC38-203ENST00000546803 NF1P21359 2839 aa13.67□□□□□ -0.22
CCDC38-203ENST00000546803 TRBV6-6A0A0A6YYG2 114 aa13.66□□□□□ -0.22
CCDC38-203ENST00000546803 RAB27BO00194 218 aa13.66□□□□□ -0.22
CCDC38-203ENST00000546803 NAPSAO96009 420 aa13.66□□□□□ -0.22
CCDC38-203ENST00000546803 MELTFP08582 738 aa13.66□□□□□ -0.22
CCDC38-203ENST00000546803 NFYBP25208 207 aa13.66□□□□□ -0.22
CCDC38-203ENST00000546803 SERPINB10P48595 397 aa13.66□□□□□ -0.22
CCDC38-203ENST00000546803 PRRX1P54821 245 aa13.66□□□□□ -0.22
CCDC38-203ENST00000546803 VBP1P61758 197 aa13.66□□□□□ -0.22
CCDC38-203ENST00000546803 UBA52P62987 128 aaKnown RBP13.66□□□□□ -0.22
CCDC38-203ENST00000546803 ARL6IP1Q15041 203 aa13.66□□□□□ -0.22
CCDC38-203ENST00000546803 PLAC9Q5JTB6 97 aa13.66□□□□□ -0.22
CCDC38-203ENST00000546803 BEND2Q8NDZ0 799 aa13.66□□□□□ -0.22
CCDC38-203ENST00000546803 SSMEM1Q8WWF3 244 aa13.66□□□□□ -0.22
CCDC38-203ENST00000546803 TMEM158Q8WZ71 300 aa13.66□□□□□ -0.22
CCDC38-203ENST00000546803 CREB3L1Q96BA8 519 aa13.66□□□□□ -0.22
CCDC38-203ENST00000546803 MALSU1Q96EH3 234 aa13.66□□□□□ -0.22
CCDC38-203ENST00000546803 MEGF9Q9H1U4 602 aa13.66□□□□□ -0.22
CCDC38-203ENST00000546803 ATG5Q9H1Y0 275 aa13.66□□□□□ -0.22
CCDC38-203ENST00000546803 DPAGT1Q9H3H5 408 aa13.66□□□□□ -0.22
CCDC38-203ENST00000546803 AK3Q9UIJ7 227 aa13.66□□□□□ -0.22
CCDC38-203ENST00000546803 POMT1Q9Y6A1 747 aa13.66□□□□□ -0.22
CCDC38-203ENST00000546803 NIPBLQ6KC79 2804 aaeCLIP13.66□□□□□ -0.22
CCDC38-203ENST00000546803 DNAJC9-AS1A6NH13 148 aa13.65□□□□□ -0.22
CCDC38-203ENST00000546803 C12orf77C9JDV5 145 aa13.65□□□□□ -0.22
CCDC38-203ENST00000546803 F2RL2O00254 374 aa13.65□□□□□ -0.22
CCDC38-203ENST00000546803 TOR1AO14656 332 aa13.65□□□□□ -0.22
CCDC38-203ENST00000546803 HOXA3O43365 443 aaPredicted RBP13.65□□□□□ -0.22
CCDC38-203ENST00000546803 RCC1P18754 421 aaPredicted RBP13.65□□□□□ -0.22
CCDC38-203ENST00000546803 SLC9A3R2Q15599 337 aa13.65□□□□□ -0.22
CCDC38-203ENST00000546803 CTF1Q16619 201 aa13.65□□□□□ -0.22
CCDC38-203ENST00000546803 MOGAT2Q3SYC2 334 aa13.65□□□□□ -0.22
CCDC38-203ENST00000546803 BAIAP2L2Q6UXY1 529 aa13.65□□□□□ -0.22
CCDC38-203ENST00000546803 MOB1BQ7L9L4 216 aa13.65□□□□□ -0.22
CCDC38-203ENST00000546803 OR9G1Q8NH87 305 aa13.65□□□□□ -0.22
CCDC38-203ENST00000546803 SLC25A46Q96AG3 418 aa13.65□□□□□ -0.22
CCDC38-203ENST00000546803 AJUBAQ96IF1 538 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms