RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 FABP5Q01469 135 aa9.58□□□□□ -0.88
YBX3-217ENST00000546164 HLA-DRB5Q30154 266 aa9.58□□□□□ -0.88
YBX3-217ENST00000546164 UBE2UQ5VVX9 321 aa9.58□□□□□ -0.88
YBX3-217ENST00000546164 SIGIRRQ6IA17 410 aa9.58□□□□□ -0.88
YBX3-217ENST00000546164 RAB12Q6IQ22 244 aa9.58□□□□□ -0.88
YBX3-217ENST00000546164 CD200R1LQ6Q8B3 271 aa9.58□□□□□ -0.88
YBX3-217ENST00000546164 SPARTQ8N0X7 666 aa9.58□□□□□ -0.88
YBX3-217ENST00000546164 OR9G1Q8NH87 305 aa9.58□□□□□ -0.88
YBX3-217ENST00000546164 MRGPRDQ8TDS7 321 aa9.58□□□□□ -0.88
YBX3-217ENST00000546164 WFDC12Q8WWY7 111 aa9.58□□□□□ -0.88
YBX3-217ENST00000546164 CREB3L1Q96BA8 519 aa9.58□□□□□ -0.88
YBX3-217ENST00000546164 RANBP3Q9H6Z4 567 aaPredicted RBP9.58□□□□□ -0.88
YBX3-217ENST00000546164 NDUFB11Q9NX14 153 aa9.58□□□□□ -0.88
YBX3-217ENST00000546164 IDI2-AS1Q9NZ38 188 aa9.58□□□□□ -0.88
YBX3-217ENST00000546164 TCF19Q9Y242 345 aa9.58□□□□□ -0.88
YBX3-217ENST00000546164 TMEM14DPA8MWL7 114 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 LEUTXA8MZ59 168 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 C15orf65H3BRN8 121 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 SLC17A2O00624 439 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 ORC5O43913 435 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 PDCD6O75340 191 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 BPNT1O95861 308 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 GALP22466 123 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 SSTR5P35346 364 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 RPS27AP62979 156 aaKnown RBP9.57□□□□□ -0.88
YBX3-217ENST00000546164 QRFPP83859 136 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 FAM189A2Q15884 450 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 LY6EQ16553 131 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 OR52M1Q8NGK5 317 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 KCNG3Q8TAE7 436 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 NDNFQ8TB73 568 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 NEK7Q8TDX7 302 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 FCGR1BQ92637 280 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 FAM46BQ96A09 425 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 GFI1Q99684 422 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 TM2D1Q9BX74 207 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 ABCB10Q9NRK6 738 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 PITPNC1Q9UKF7 332 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 LRRC42Q9Y546 428 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 PEX16Q9Y5Y5 336 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 PKD1L1Q8TDX9 2849 aa9.57□□□□□ -0.88
YBX3-217ENST00000546164 TRAV1-2A0A0B4J238 106 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 TRDV1A0A1B0GX56 115 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 A6NDX4 124 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 OOSP1A8MZH6 123 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 LY6LH3BQJ8 138 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 BUB1B-PAK6H3BSN5 160 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 AIPO00170 330 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 TOR1AO14656 332 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 CHST1O43916 411 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 MPIG6BO95866 241 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 NFYBP25208 207 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 CALRP27797 417 aaKnown RBP9.56□□□□□ -0.88
YBX3-217ENST00000546164 CEACAM3P40198 252 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 RANBP1P43487 201 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 KIR2DS4P43632 304 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 PSMD7P51665 324 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 PRRX1P54821 245 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 PROK1P58294 105 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 UNC119Q13432 240 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 Q3ZCU0 254 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 UTF1Q5T230 341 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 OR10K2Q6IF99 312 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 BRICD5Q6PL45 260 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 OR2W3Q7Z3T1 314 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 ZNF554Q86TJ5 538 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 DTX3Q8N9I9 347 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 SGMS2Q8NHU3 365 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 TMEM59Q9BXS4 323 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 MMP28Q9H239 520 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 RAB9BQ9NP90 201 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 ETAA1Q9NY74 926 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 FBLN5Q9UBX5 448 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 PSG11Q9UQ72 335 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 AK6Q9Y3D8 172 aaKnown RBP9.56□□□□□ -0.88
YBX3-217ENST00000546164 RNF114Q9Y508 228 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 HILPDAQ9Y5L2 63 aa9.56□□□□□ -0.88
YBX3-217ENST00000546164 TRAV39A0A0B4J263 110 aa9.55□□□□□ -0.88
YBX3-217ENST00000546164 FAM172BPA6NC97 362 aa9.55□□□□□ -0.88
YBX3-217ENST00000546164 J3QR06 171 aa9.55□□□□□ -0.88
YBX3-217ENST00000546164 F2RL2O00254 374 aa9.55□□□□□ -0.88
YBX3-217ENST00000546164 CCRL2O00421 344 aa9.55□□□□□ -0.88
YBX3-217ENST00000546164 CHATP28329 748 aa9.55□□□□□ -0.88
YBX3-217ENST00000546164 RAB13P51153 203 aa9.55□□□□□ -0.88
YBX3-217ENST00000546164 ARHGDIBP52566 201 aa9.55□□□□□ -0.88
YBX3-217ENST00000546164 TMEM30BQ3MIR4 351 aa9.55□□□□□ -0.88
YBX3-217ENST00000546164 PLA1AQ53H76 456 aa9.55□□□□□ -0.88
YBX3-217ENST00000546164 C6orf183Q5T699 404 aa9.55□□□□□ -0.88
YBX3-217ENST00000546164 TPTE2P1Q5T6R2 138 aa9.55□□□□□ -0.88
YBX3-217ENST00000546164 CCDC144NLQ6NUI1 221 aa9.55□□□□□ -0.88
YBX3-217ENST00000546164 C11orf88Q6PI97 169 aa9.55□□□□□ -0.88
YBX3-217ENST00000546164 TRAT1Q6PIZ9 186 aa9.55□□□□□ -0.88
YBX3-217ENST00000546164 ZNF773Q6PK81 442 aa9.55□□□□□ -0.88
YBX3-217ENST00000546164 CCBE1Q6UXH8 406 aaPredicted RBP9.55□□□□□ -0.88
YBX3-217ENST00000546164 C8orf31Q8N9H6 132 aa9.55□□□□□ -0.88
YBX3-217ENST00000546164 OR4C13Q8NGP0 309 aa9.55□□□□□ -0.88
YBX3-217ENST00000546164 RFESDQ8TAC1 157 aa9.55□□□□□ -0.88
YBX3-217ENST00000546164 ARL11Q969Q4 196 aa9.55□□□□□ -0.88
YBX3-217ENST00000546164 NPFFR1Q9GZQ6 430 aa9.55□□□□□ -0.88
YBX3-217ENST00000546164 PLGRKTQ9HBL7 147 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms