RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 MRGPRGQ86SM5 289 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 TBC1D26Q86UD7 250 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 RTN4RL2Q86UN3 420 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 TGIF2LYQ8IUE0 185 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 TCTEX1D1Q8N7M0 179 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 ZBTB34Q8NCN2 500 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 OR5A2Q8NGI9 324 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 OR52M1Q8NGK5 317 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 OR5L1Q8NGL2 311 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 OR2V1Q8NHB1 315 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 CLDND2Q8NHS1 167 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 SCGB1C1Q8TD33 95 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 NPRL2Q8WTW4 380 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 RLN3Q8WXF3 142 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 EXTL1Q92935 676 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 MR1Q95460 341 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 CPNE4Q96A23 557 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-225ENST00000545920 SLAMF9Q96A28 289 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 RAB39BQ96DA2 213 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 MISP3Q96FF7 219 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 RAX2Q96IS3 184 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 ZNF385AQ96PM9 386 aaKnown RBP5.55□□□□□ -1.52
SNHG1-225ENST00000545920 PFDN5Q99471 154 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 CABLES2Q9BTV7 478 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 GGACTQ9BVM4 153 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 KRTAP4-9Q9BYQ8 210 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 TPSD1Q9BZJ3 242 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 STRADBQ9C0K7 418 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 OR2H1Q9GZK4 316 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 LIME1Q9H400 295 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 TINAGQ9UJW2 476 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 PITPNC1Q9UKF7 332 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 ZDHHC8Q9ULC8 765 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 FBXO7Q9Y3I1 522 aa5.55□□□□□ -1.52
SNHG1-225ENST00000545920 A0A0J9YW62 118 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 IGHV5-10-1A0A0J9YXX1 117 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 hCG_1809904A0A1W2PP81 198 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 A0A1W2PPE2 198 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 A0A1W2PR64 198 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 A0A1W2PRV1 198 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 NKX2-6A6NCS4 301 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 OR5B21A6NL26 309 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 ZNF716A6NP11 495 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 ZNF724A8MTY0 619 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 CDRT15L2A8MXV6 281 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 TMEM250H0YL14 139 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 TNFSF11O14788 317 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 CYTIPO60759 359 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 RAMP1O60894 148 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 P04436 131 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 OR13C7P0DN81 318 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 BCL2P10415 239 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 HIST1H1BP16401 226 aaKnown RBP5.54□□□□□ -1.52
SNHG1-225ENST00000545920 ZNF32P17041 273 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 F2RP25116 425 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 OPRM1P35372 400 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 PPP1CCP36873 323 aaKnown RBP5.54□□□□□ -1.52
SNHG1-225ENST00000545920 CARD18P57730 90 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 RAB4BP61018 213 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 DLK1P80370 383 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 ELOBQ15370 118 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 CEACAM21Q3KPI0 293 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 SP6Q3SY56 376 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 AKIRIN2Q53H80 203 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 CT83Q5H943 113 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 COA6Q5JTJ3 125 aaKnown RBP5.54□□□□□ -1.52
SNHG1-225ENST00000545920 FAM209BQ5JX69 171 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 PHYHD1Q5SRE7 291 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 ZNF880Q6PDB4 577 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 ZNF574Q6ZN55 896 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-225ENST00000545920 C16orf47Q6ZP98 133 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-225ENST00000545920 SHISA6Q6ZSJ9 500 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 SLC16A13Q7RTY0 426 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 Q8IYB0 196 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 OR5C1Q8NGR4 320 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 OR2Y1Q8NGV0 311 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 OR5R1Q8NH85 324 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 RNASEH2CQ8TDP1 164 aaKnown RBP5.54□□□□□ -1.52
SNHG1-225ENST00000545920 APOBEC3DQ96AK3 386 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-225ENST00000545920 SIGLEC12Q96PQ1 595 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 TP53RKQ96S44 253 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 FOXB1Q99853 325 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 HDHD3Q9BSH5 251 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-225ENST00000545920 PKIBQ9C010 78 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 WNT5BQ9H1J7 359 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 CHODLQ9H9P2 273 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 DOK5Q9P104 306 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 WNT16Q9UBV4 365 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 VAX2Q9UIW0 290 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 RNF115Q9Y4L5 304 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 MPC1Q9Y5U8 109 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 PUS1Q9Y606 427 aaKnown RBP eCLIP5.54□□□□□ -1.52
SNHG1-225ENST00000545920 EXPH5Q8NEV8 1989 aa5.54□□□□□ -1.52
SNHG1-225ENST00000545920 IGKV1-12A0A0C4DH73 117 aa5.53□□□□□ -1.52
SNHG1-225ENST00000545920 A0A1W2PPE3 182 aa5.53□□□□□ -1.52
SNHG1-225ENST00000545920 FAM24AA6NFZ4 105 aa5.53□□□□□ -1.52
SNHG1-225ENST00000545920 SLC22A20A6NK97 555 aa5.53□□□□□ -1.52
SNHG1-225ENST00000545920 PROB1E7EW31 1015 aa5.53□□□□□ -1.52
SNHG1-225ENST00000545920 TSTD3H0UI37 97 aa5.53□□□□□ -1.52
SNHG1-225ENST00000545920 TRAPPC2LH3BP13 241 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms