RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 MMDQ15546 238 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 SSX7Q7RTT5 188 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 NUDT16L1Q9BRJ7 211 aaKnown RBP7.53□□□□□ -1.2
CLIP1-218ENST00000545889 SLC35D1Q9NTN3 355 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 UQCC1Q9NVA1 299 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 ZNF230Q9UIE0 474 aaPredicted RBP7.53□□□□□ -1.2
CLIP1-218ENST00000545889 NCOR2Q9Y618 2525 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 IGKV1D-16P01601 117 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 SNRPCP09234 159 aaKnown RBP7.53□□□□□ -1.2
CLIP1-218ENST00000545889 ADRA2CP18825 462 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 PSMB3P49720 205 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 ECSCRQ19T08 205 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 TIGITQ495A1 244 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 TEX30Q5JUR7 227 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 HIST2H3PS2Q5TEC6 136 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 ZNF721Q8TF20 911 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 CHST2Q9Y4C5 530 aa7.53□□□□□ -1.2
CLIP1-218ENST00000545889 C17orf51A8MQB3 221 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 IAPPP10997 89 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 PTHLHP12272 177 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 ZNF141Q15928 474 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 CDCP2Q5VXM1 449 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 ADAMTS17Q8TE56 1095 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 WFDC6Q9BQY6 131 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 RHOFQ9HBH0 211 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 GPR35Q9HC97 309 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 EXOSC3Q9NQT5 275 aaKnown RBP7.52□□□□□ -1.21
CLIP1-218ENST00000545889 KLK11Q9UBX7 282 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 A0A1W2PQD3 144 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 LIPT2A6NK58 231 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 OR2C1O95371 312 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 RAB5AP20339 215 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 TSPO2Q5TGU0 170 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 DEGS2Q6QHC5 323 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 DBX2Q6ZNG2 339 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 ACOT7LQ6ZUV0 252 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 MDP1Q86V88 176 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 OR2M3Q8NG83 312 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 OR52I2Q8NH67 350 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 RTN4IP1Q8WWV3 396 aaPredicted RBP7.52□□□□□ -1.21
CLIP1-218ENST00000545889 MED9Q9NWA0 146 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 MTCH1Q9NZJ7 389 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 POMT1Q9Y6A1 747 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 PLXNA2O75051 1894 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 RFPL4AA6NLU0 287 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 SERPINE3A8MV23 424 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 RFPL4AL1F8VTS6 287 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 PLPP3O14495 311 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 GCM2O75603 506 aaPredicted RBP7.52□□□□□ -1.21
CLIP1-218ENST00000545889 TGFAP01135 160 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 PI3P19957 117 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 CHATP28329 748 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 ERVFRD-1P60508 538 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 CDK5R1Q15078 307 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 KISS1Q15726 138 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 SLC25A35Q3KQZ1 300 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 DCAF12L2Q5VW00 463 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 ETV3LQ6ZN32 361 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 ZNF439Q8NDP4 499 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 OR13C8Q8NGS7 320 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 SMIM19Q96E16 107 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 C20orf141Q9NUB4 165 aa7.52□□□□□ -1.21
CLIP1-218ENST00000545889 METTL1Q9UBP6 276 aaKnown RBP7.52□□□□□ -1.21
CLIP1-218ENST00000545889 A0A1W2PPE3 182 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 F5H697 171 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 M0R143 59 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 GNG7O60262 68 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 OR2F2O95006 317 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 GZMHP20718 246 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 FUT5Q11128 374 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 C2orf76Q3KRA6 126 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 SPACA3Q8IXA5 215 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 MUC15Q8N387 334 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 OR51S1Q8NGJ8 323 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 ZNF596Q8TC21 504 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 OIT3Q8WWZ8 545 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 ERGIC1Q969X5 290 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 ADTRPQ96IZ2 230 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 SFXN3Q9BWM7 321 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 RYDENQ9NUL5 291 aaKnown RBP7.51□□□□□ -1.21
CLIP1-218ENST00000545889 DOCK7Q96N67 2140 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 TRANK1O15050 2925 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 A0A0J9YW62 118 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 TOX4O94842 621 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 SEMG1P04279 462 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 VDAC1P21796 283 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 IGFBP7Q16270 282 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 LINC00303Q3SY05 128 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 DHRS7BQ6IAN0 325 aaPredicted RBP7.51□□□□□ -1.21
CLIP1-218ENST00000545889 OR4F17Q8NGA8 305 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 OR4F5Q8NH21 305 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 OR4F4Q96R69 305 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 SOX7Q9BT81 388 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 DCTN5Q9BTE1 182 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 GPR61Q9BZJ8 451 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 PARD6AQ9NPB6 346 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 CLEC18AA5D8T8 446 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 C5orf52A6NGY3 159 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 MS4A18H0YCH9 400 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 FFAR1O14842 300 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms