RNA–Protein interactions for RNA: ENST00000544004.1

AP000439.1-201, humanhuman

TSL 4 BASIC

Gene AP000439.1, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.1-201ENST00000544004 IGKV1D-12P01611 117 aa8.64□□□□□ -1.03
AP000439.1-201ENST00000544004 LGALS1P09382 135 aaKnown RBP8.64□□□□□ -1.03
AP000439.1-201ENST00000544004 RASSF2P50749 326 aa8.64□□□□□ -1.03
AP000439.1-201ENST00000544004 CXCR4P61073 352 aa8.64□□□□□ -1.03
AP000439.1-201ENST00000544004 ACTR3P61158 418 aa8.64□□□□□ -1.03
AP000439.1-201ENST00000544004 PDZK1IP1Q13113 114 aa8.64□□□□□ -1.03
AP000439.1-201ENST00000544004 CHST4Q8NCG5 386 aa8.64□□□□□ -1.03
AP000439.1-201ENST00000544004 OR51T1Q8NGJ9 327 aa8.64□□□□□ -1.03
AP000439.1-201ENST00000544004 MRGPRDQ8TDS7 321 aa8.64□□□□□ -1.03
AP000439.1-201ENST00000544004 RTN4IP1Q8WWV3 396 aaPredicted RBP8.64□□□□□ -1.03
AP000439.1-201ENST00000544004 RFT1Q96AA3 541 aa8.64□□□□□ -1.03
AP000439.1-201ENST00000544004 NABP2Q9BQ15 211 aa8.64□□□□□ -1.03
AP000439.1-201ENST00000544004 ST6GALNAC5Q9BVH7 336 aa8.64□□□□□ -1.03
AP000439.1-201ENST00000544004 ZCCHC4Q9H5U6 513 aa8.64□□□□□ -1.03
AP000439.1-201ENST00000544004 PARP11Q9NR21 331 aa8.64□□□□□ -1.03
AP000439.1-201ENST00000544004 TVP23BQ9NYZ1 205 aa8.64□□□□□ -1.03
AP000439.1-201ENST00000544004 CEPT1Q9Y6K0 416 aa8.64□□□□□ -1.03
AP000439.1-201ENST00000544004 TRAV41A0A0B4J266 112 aa8.63□□□□□ -1.03
AP000439.1-201ENST00000544004 IGKV1-9A0A0C4DH69 117 aa8.63□□□□□ -1.03
AP000439.1-201ENST00000544004 CCDC182A6NF36 153 aa8.63□□□□□ -1.03
AP000439.1-201ENST00000544004 ATP5HO75947 161 aa8.63□□□□□ -1.03
AP000439.1-201ENST00000544004 KDM4BO94953 1096 aa8.63□□□□□ -1.03
AP000439.1-201ENST00000544004 RPP14O95059 124 aaKnown RBP8.63□□□□□ -1.03
AP000439.1-201ENST00000544004 HSPB1P04792 205 aaKnown RBP8.63□□□□□ -1.03
AP000439.1-201ENST00000544004 SSTR5P35346 364 aa8.63□□□□□ -1.03
AP000439.1-201ENST00000544004 CRISP1P54107 249 aa8.63□□□□□ -1.03
AP000439.1-201ENST00000544004 CDK5Q00535 292 aa8.63□□□□□ -1.03
AP000439.1-201ENST00000544004 YIPF7Q8N8F6 280 aa8.63□□□□□ -1.03
AP000439.1-201ENST00000544004 OR10A7Q8NGE5 316 aa8.63□□□□□ -1.03
AP000439.1-201ENST00000544004 CASTOR1Q8WTX7 329 aa8.63□□□□□ -1.03
AP000439.1-201ENST00000544004 FLYWCH2Q96CP2 140 aaKnown RBP8.63□□□□□ -1.03
AP000439.1-201ENST00000544004 MBOAT4Q96T53 435 aa8.63□□□□□ -1.03
AP000439.1-201ENST00000544004 ADI1Q9BV57 179 aa8.63□□□□□ -1.03
AP000439.1-201ENST00000544004 MRM2Q9UI43 246 aaKnown RBP8.63□□□□□ -1.03
AP000439.1-201ENST00000544004 TRAV39A0A0B4J263 110 aa8.62□□□□□ -1.03
AP000439.1-201ENST00000544004 IGHV3-11P01762 117 aa8.62□□□□□ -1.03
AP000439.1-201ENST00000544004 DAPP51397 102 aa8.62□□□□□ -1.03
AP000439.1-201ENST00000544004 CDK5R1Q15078 307 aa8.62□□□□□ -1.03
AP000439.1-201ENST00000544004 C1orf146Q5VVC0 180 aa8.62□□□□□ -1.03
AP000439.1-201ENST00000544004 LINC00322Q6ZN03 302 aaPredicted RBP8.62□□□□□ -1.03
AP000439.1-201ENST00000544004 GTSCR1Q86UQ5 136 aa8.62□□□□□ -1.03
AP000439.1-201ENST00000544004 PP6455Q8WZ26 134 aa8.62□□□□□ -1.03
AP000439.1-201ENST00000544004 NRBF2Q96F24 287 aa8.62□□□□□ -1.03
AP000439.1-201ENST00000544004 CNN2Q99439 309 aaKnown RBP8.62□□□□□ -1.03
AP000439.1-201ENST00000544004 BARHL1Q9BZE3 327 aa8.62□□□□□ -1.03
AP000439.1-201ENST00000544004 NCOR1P1Q9H4R4 102 aa8.62□□□□□ -1.03
AP000439.1-201ENST00000544004 A0A1W2PN81 502 aa8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 G3V2T6 193 aa8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 H0Y980 276 aa8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 H0YJX3 145 aa8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 SOX15O60248 233 aa8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 MITFO75030 526 aaPredicted RBP8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 DEDDO75618 318 aa8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 CIB2O75838 187 aa8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 ATF1P18846 271 aa8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 PRKACBP22694 351 aa8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 IL3RAP26951 378 aa8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 CHRNA7P36544 502 aa8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 PMS2P11Q13670 270 aa8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 MMDQ15546 238 aa8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 PAN3Q58A45 887 aaKnown RBP8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 AMIGO2Q86SJ2 522 aa8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 SLC35F2Q8IXU6 374 aa8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 LINC00311Q8N616 119 aa8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 MINDY2Q8NBR6 621 aa8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 CCDC54Q8NEL0 328 aa8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 OR5D18Q8NGL1 313 aa8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 DNAJC9Q8WXX5 260 aa8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 UTP4Q969X6 686 aaKnown RBP8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 C10orf35Q96D05 121 aa8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 ADAT3Q96EY9 351 aaPredicted RBP8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 THAP7Q9BT49 309 aaPredicted RBP8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 SLC25A19Q9HC21 320 aa8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 H2AFY2Q9P0M6 372 aaPredicted RBP8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 AP4S1Q9Y587 144 aa8.61□□□□□ -1.03
AP000439.1-201ENST00000544004 IGHV7-81A0A0B4J1V7 117 aa8.6□□□□□ -1.03
AP000439.1-201ENST00000544004 SHISA3A0PJX4 238 aa8.6□□□□□ -1.03
AP000439.1-201ENST00000544004 CXorf65A6NEN9 183 aa8.6□□□□□ -1.03
AP000439.1-201ENST00000544004 RGS11O94810 467 aa8.6□□□□□ -1.03
AP000439.1-201ENST00000544004 HLA-DRB1P01911 266 aa8.6□□□□□ -1.03
AP000439.1-201ENST00000544004 FASP25445 335 aa8.6□□□□□ -1.03
AP000439.1-201ENST00000544004 BLVRBP30043 206 aaPredicted RBP8.6□□□□□ -1.03
AP000439.1-201ENST00000544004 VHLP40337 213 aa8.6□□□□□ -1.03
AP000439.1-201ENST00000544004 PTGES3Q15185 160 aaKnown RBP8.6□□□□□ -1.03
AP000439.1-201ENST00000544004 ATP6AP1Q15904 470 aa8.6□□□□□ -1.03
AP000439.1-201ENST00000544004 ECSCRQ19T08 205 aa8.6□□□□□ -1.03
AP000439.1-201ENST00000544004 RSBN1Q5VWQ0 802 aaPredicted RBP8.6□□□□□ -1.03
AP000439.1-201ENST00000544004 FAHD1Q6P587 224 aa8.6□□□□□ -1.03
AP000439.1-201ENST00000544004 PLPPR1Q8TBJ4 325 aa8.6□□□□□ -1.03
AP000439.1-201ENST00000544004 OPALINQ96PE5 141 aa8.6□□□□□ -1.03
AP000439.1-201ENST00000544004 SPACA5Q96QH8 159 aa8.6□□□□□ -1.03
AP000439.1-201ENST00000544004 PLEKHA3Q9HB20 300 aa8.6□□□□□ -1.03
AP000439.1-201ENST00000544004 RHOFQ9HBH0 211 aa8.6□□□□□ -1.03
AP000439.1-201ENST00000544004 NEK6Q9HC98 313 aa8.6□□□□□ -1.03
AP000439.1-201ENST00000544004 FAM118AQ9NWS6 357 aa8.6□□□□□ -1.03
AP000439.1-201ENST00000544004 MYRFQ9Y2G1 1151 aa8.6□□□□□ -1.03
AP000439.1-201ENST00000544004 VPS13DQ5THJ4 4388 aa8.6□□□□□ -1.03
AP000439.1-201ENST00000544004 TRAV24A0A0B4J272 114 aa8.59□□□□□ -1.03
AP000439.1-201ENST00000544004 LOC107986453A0A1B0GWG9 222 aa8.59□□□□□ -1.03
AP000439.1-201ENST00000544004 ZNF670-ZNF695F2Z2N8 137 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms