RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 TMEM30BQ3MIR4 351 aa10.43□□□□□ -0.74
RTN3-213ENST00000543552 FOXB2Q5VYV0 432 aa10.43□□□□□ -0.74
RTN3-213ENST00000543552 TTC23Q5W5X9 447 aa10.43□□□□□ -0.74
RTN3-213ENST00000543552 FOXRED2Q8IWF2 684 aa10.43□□□□□ -0.74
RTN3-213ENST00000543552 COMMD1Q8N668 190 aa10.43□□□□□ -0.74
RTN3-213ENST00000543552 OR52M1Q8NGK5 317 aa10.43□□□□□ -0.74
RTN3-213ENST00000543552 RFESDQ8TAC1 157 aa10.43□□□□□ -0.74
RTN3-213ENST00000543552 PLPPR1Q8TBJ4 325 aa10.43□□□□□ -0.74
RTN3-213ENST00000543552 NEK7Q8TDX7 302 aa10.43□□□□□ -0.74
RTN3-213ENST00000543552 LEAP2Q969E1 77 aa10.43□□□□□ -0.74
RTN3-213ENST00000543552 SH2D7A6NKC9 451 aaPredicted RBP10.42□□□□□ -0.74
RTN3-213ENST00000543552 SERPINE3A8MV23 424 aa10.42□□□□□ -0.74
RTN3-213ENST00000543552 CCRL2O00421 344 aa10.42□□□□□ -0.74
RTN3-213ENST00000543552 GEMIN2O14893 280 aaKnown RBP10.42□□□□□ -0.74
RTN3-213ENST00000543552 OGG1O15527 345 aa10.42□□□□□ -0.74
RTN3-213ENST00000543552 IGHV3-7P01780 117 aa10.42□□□□□ -0.74
RTN3-213ENST00000543552 GAPDHP04406 335 aaKnown RBP10.42□□□□□ -0.74
RTN3-213ENST00000543552 TAS2R43P59537 309 aa10.42□□□□□ -0.74
RTN3-213ENST00000543552 ZNF816Q0VGE8 651 aaPredicted RBP10.42□□□□□ -0.74
RTN3-213ENST00000543552 YIF1BQ5BJH7 314 aa10.42□□□□□ -0.74
RTN3-213ENST00000543552 ATAD3CQ5T2N8 411 aa10.42□□□□□ -0.74
RTN3-213ENST00000543552 OR2G6Q5TZ20 316 aa10.42□□□□□ -0.74
RTN3-213ENST00000543552 C5orf56Q8N8D9 126 aa10.42□□□□□ -0.74
RTN3-213ENST00000543552 C8orf31Q8N9H6 132 aa10.42□□□□□ -0.74
RTN3-213ENST00000543552 THRSPQ92748 146 aa10.42□□□□□ -0.74
RTN3-213ENST00000543552 ARL11Q969Q4 196 aa10.42□□□□□ -0.74
RTN3-213ENST00000543552 MRPS24Q96EL2 167 aaKnown RBP10.42□□□□□ -0.74
RTN3-213ENST00000543552 TMEM80Q96HE8 168 aa10.42□□□□□ -0.74
RTN3-213ENST00000543552 ZNF184Q99676 751 aaPredicted RBP10.42□□□□□ -0.74
RTN3-213ENST00000543552 GON7Q9BXV9 100 aa10.42□□□□□ -0.74
RTN3-213ENST00000543552 SDCBPO00560 298 aaPredicted RBP10.41□□□□□ -0.74
RTN3-213ENST00000543552 TXNL1O43396 289 aa10.41□□□□□ -0.74
RTN3-213ENST00000543552 ORC5O43913 435 aa10.41□□□□□ -0.74
RTN3-213ENST00000543552 IGKV1D-33P01593 117 aa10.41□□□□□ -0.74
RTN3-213ENST00000543552 IGKV1-33P01594 117 aa10.41□□□□□ -0.74
RTN3-213ENST00000543552 Q3ZCU0 254 aa10.41□□□□□ -0.74
RTN3-213ENST00000543552 Q499Y3 187 aa10.41□□□□□ -0.74
RTN3-213ENST00000543552 SLC22A6Q4U2R8 563 aa10.41□□□□□ -0.74
RTN3-213ENST00000543552 XAF1Q6GPH4 301 aa10.41□□□□□ -0.74
RTN3-213ENST00000543552 SLC35E3Q7Z769 313 aa10.41□□□□□ -0.74
RTN3-213ENST00000543552 PACRGLQ8N7B6 248 aa10.41□□□□□ -0.74
RTN3-213ENST00000543552 CYGBQ8WWM9 190 aa10.41□□□□□ -0.74
RTN3-213ENST00000543552 GHSRQ92847 366 aa10.41□□□□□ -0.74
RTN3-213ENST00000543552 MCRIP2Q9BUT9 160 aaKnown RBP10.41□□□□□ -0.74
RTN3-213ENST00000543552 ZFP57Q9NU63 452 aa10.41□□□□□ -0.74
RTN3-213ENST00000543552 ZMAT5Q9UDW3 170 aaKnown RBP10.41□□□□□ -0.74
RTN3-213ENST00000543552 IGHV1-3A0A0C4DH29 117 aa10.4□□□□□ -0.74
RTN3-213ENST00000543552 TRBV5-5A0A0J9YX44 114 aa10.4□□□□□ -0.74
RTN3-213ENST00000543552 NUDT19A8MXV4 375 aa10.4□□□□□ -0.74
RTN3-213ENST00000543552 MCRIP1C9JLW8 97 aa10.4□□□□□ -0.74
RTN3-213ENST00000543552 AIPO00170 330 aa10.4□□□□□ -0.74
RTN3-213ENST00000543552 SPINT2O43291 252 aa10.4□□□□□ -0.74
RTN3-213ENST00000543552 GPX5O75715 221 aa10.4□□□□□ -0.74
RTN3-213ENST00000543552 FSTP19883 344 aa10.4□□□□□ -0.74
RTN3-213ENST00000543552 RPL23AP62750 156 aaKnown RBP10.4□□□□□ -0.74
RTN3-213ENST00000543552 HNF4GQ14541 408 aa10.4□□□□□ -0.74
RTN3-213ENST00000543552 UTF1Q5T230 341 aa10.4□□□□□ -0.74
RTN3-213ENST00000543552 C6orf183Q5T699 404 aa10.4□□□□□ -0.74
RTN3-213ENST00000543552 DMKNQ6E0U4 476 aaPredicted RBP10.4□□□□□ -0.74
RTN3-213ENST00000543552 TRAT1Q6PIZ9 186 aa10.4□□□□□ -0.74
RTN3-213ENST00000543552 ZNF497Q6ZNH5 498 aa10.4□□□□□ -0.74
RTN3-213ENST00000543552 MOB3BQ86TA1 216 aa10.4□□□□□ -0.74
RTN3-213ENST00000543552 TGIF2LXQ8IUE1 241 aa10.4□□□□□ -0.74
RTN3-213ENST00000543552 CDH26Q8IXH8 852 aa10.4□□□□□ -0.74
RTN3-213ENST00000543552 IZUMO1Q8IYV9 350 aa10.4□□□□□ -0.74
RTN3-213ENST00000543552 JAGN1Q8N5M9 183 aa10.4□□□□□ -0.74
RTN3-213ENST00000543552 LINC00311Q8N616 119 aa10.4□□□□□ -0.74
RTN3-213ENST00000543552 OR2T10Q8NGZ9 312 aa10.4□□□□□ -0.74
RTN3-213ENST00000543552 MRPS28Q9Y2Q9 187 aaKnown RBP10.4□□□□□ -0.74
RTN3-213ENST00000543552 TRAV39A0A0B4J263 110 aa10.39□□□□□ -0.75
RTN3-213ENST00000543552 EFCAB10A6NFE3 127 aa10.39□□□□□ -0.75
RTN3-213ENST00000543552 NCBP2LA6PVI3 153 aaKnown RBP10.39□□□□□ -0.75
RTN3-213ENST00000543552 C15orf65H3BRN8 121 aa10.39□□□□□ -0.75
RTN3-213ENST00000543552 AP4M1O00189 453 aa10.39□□□□□ -0.75
RTN3-213ENST00000543552 CA11O75493 328 aa10.39□□□□□ -0.75
RTN3-213ENST00000543552 MPIG6BO95866 241 aa10.39□□□□□ -0.75
RTN3-213ENST00000543552 IGHG2P01859 326 aa10.39□□□□□ -0.75
RTN3-213ENST00000543552 IGFBP3P17936 291 aaPredicted RBP10.39□□□□□ -0.75
RTN3-213ENST00000543552 DCTN2Q13561 401 aaKnown RBP10.39□□□□□ -0.75
RTN3-213ENST00000543552 EBI3Q14213 229 aa10.39□□□□□ -0.75
RTN3-213ENST00000543552 C10orf99Q6UWK7 81 aa10.39□□□□□ -0.75
RTN3-213ENST00000543552 ZNF329Q86UD4 541 aa10.39□□□□□ -0.75
RTN3-213ENST00000543552 NKAIN3Q8N8D7 197 aa10.39□□□□□ -0.75
RTN3-213ENST00000543552 LINC00482Q8N8I6 264 aa10.39□□□□□ -0.75
RTN3-213ENST00000543552 OR8H1Q8NGG4 311 aa10.39□□□□□ -0.75
RTN3-213ENST00000543552 LIN7CQ9NUP9 197 aaKnown RBP10.39□□□□□ -0.75
RTN3-213ENST00000543552 GFOD1Q9NXC2 390 aa10.39□□□□□ -0.75
RTN3-213ENST00000543552 RCC2Q9P258 522 aaKnown RBP10.39□□□□□ -0.75
RTN3-213ENST00000543552 GNG12Q9UBI6 72 aa10.39□□□□□ -0.75
RTN3-213ENST00000543552 TRAPPC2LQ9UL33 140 aa10.39□□□□□ -0.75
RTN3-213ENST00000543552 SIRT4Q9Y6E7 314 aaPredicted RBP10.39□□□□□ -0.75
RTN3-213ENST00000543552 A0A1W2PPE3 182 aa10.38□□□□□ -0.75
RTN3-213ENST00000543552 FAM90A10PA6NDY2 464 aa10.38□□□□□ -0.75
RTN3-213ENST00000543552 FAM90A7PA6NKC0 464 aa10.38□□□□□ -0.75
RTN3-213ENST00000543552 FAM90A23PA8MXZ1 464 aa10.38□□□□□ -0.75
RTN3-213ENST00000543552 MT-ND4P03905 459 aa10.38□□□□□ -0.75
RTN3-213ENST00000543552 MAPK3P27361 379 aaPredicted RBP10.38□□□□□ -0.75
RTN3-213ENST00000543552 CD1BP29016 333 aa10.38□□□□□ -0.75
RTN3-213ENST00000543552 REG1BP48304 166 aa10.38□□□□□ -0.75
RTN3-213ENST00000543552 GP2P55259 537 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms