RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 SSTR5P35346 364 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 MNDAP41218 407 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 GNG2P59768 71 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 MOGAT2Q3SYC2 334 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 CDNFQ49AH0 187 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 UBE2NLQ5JXB2 153 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 SIGIRRQ6IA17 410 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 BRD3OSQ6XYD6 125 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 C1orf229Q6ZS94 237 aaPredicted RBP5.18□□□□□ -1.58
LTBR-212ENST00000543542 C1orf122Q6ZSJ8 110 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 IZUMO1Q8IYV9 350 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 FAM89BQ8N5H3 189 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 Q8N7P7 452 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 DTX3Q8N9I9 347 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 RFESDQ8TAC1 157 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 UBALD1Q8TB05 177 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 MRPL30Q8TCC3 161 aaKnown RBP5.18□□□□□ -1.58
LTBR-212ENST00000543542 ZNF418Q8TF45 676 aaPredicted RBP5.18□□□□□ -1.58
LTBR-212ENST00000543542 CORO2AQ92828 525 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 ZDHHC16Q969W1 377 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 DACT3Q96B18 629 aaPredicted RBP5.18□□□□□ -1.58
LTBR-212ENST00000543542 TBX15Q96SF7 602 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 TMEM133Q9H2Q1 129 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 RIMS4Q9H426 269 aaPredicted RBP5.18□□□□□ -1.58
LTBR-212ENST00000543542 NCOR1P1Q9H4R4 102 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 IDI2-AS1Q9NZ38 188 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 AK3Q9UIJ7 227 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 ADAM30Q9UKF2 790 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 HSF4Q9ULV5 492 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 CEPT1Q9Y6K0 416 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 SESN1Q9Y6P5 492 aa5.18□□□□□ -1.58
LTBR-212ENST00000543542 IGHV3-43A0A0B4J1X8 118 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 SERPINE3A8MV23 424 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 RNASEK-C17orf49H0YIS7 233 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 SDCBPO00560 298 aaPredicted RBP5.17□□□□□ -1.58
LTBR-212ENST00000543542 NPFFO15130 113 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 HSPA12AO43301 675 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 ORC5O43913 435 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 HPGDSO60760 199 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 IGHV3-7P01780 117 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 RBP4P02753 201 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 IGHV3-43DP0DP04 118 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 HIST1H1DP16402 221 aaKnown RBP5.17□□□□□ -1.58
LTBR-212ENST00000543542 RCC1P18754 421 aaPredicted RBP5.17□□□□□ -1.58
LTBR-212ENST00000543542 GNG10P50151 68 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 UBE2E1P51965 193 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 PRRX1P54821 245 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 TMEM50BP56557 158 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 BPIFB3P59826 476 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 C17orf58Q2M2W7 97 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 KLF17Q5JT82 389 aaPredicted RBP5.17□□□□□ -1.58
LTBR-212ENST00000543542 PLAC9Q5JTB6 97 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 TMEM69Q5SWH9 247 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 OLFML2AQ68BL7 652 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 HEPN1Q6WQI6 88 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 MOB1BQ7L9L4 216 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 TCF23Q7RTU1 214 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 RTN4RL2Q86UN3 420 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 ABHD12Q8N2K0 398 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 ZNF596Q8TC21 504 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 IL1F10Q8WWZ1 152 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 SLC6A7Q99884 636 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 HDHD3Q9BSH5 251 aaPredicted RBP5.17□□□□□ -1.58
LTBR-212ENST00000543542 DCUN1D5Q9BTE7 237 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 CLEC7AQ9BXN2 247 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 C6orf62Q9GZU0 229 aaPredicted RBP5.17□□□□□ -1.58
LTBR-212ENST00000543542 TAF9BQ9HBM6 251 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 C12orf4Q9NQ89 552 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 NDUFA13Q9P0J0 144 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 GNG12Q9UBI6 72 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 ZNF69Q9UC07 566 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 MGAT4AQ9UM21 535 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 MRPS7Q9Y2R9 242 aaKnown RBP5.17□□□□□ -1.58
LTBR-212ENST00000543542 DSCAML1Q8TD84 2053 aa5.17□□□□□ -1.58
LTBR-212ENST00000543542 ABCA1O95477 2261 aa5.16□□□□□ -1.58
LTBR-212ENST00000543542 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.16□□□□□ -1.581e-6■■■■□ 19.9
LTBR-212ENST00000543542 A0A0A6YYH2 397 aa5.16□□□□□ -1.58
LTBR-212ENST00000543542 IGHV2-26A0A0B4J1V2 119 aa5.16□□□□□ -1.58
LTBR-212ENST00000543542 TMEM235A6NFC5 223 aa5.16□□□□□ -1.58
LTBR-212ENST00000543542 A6NJ64 397 aa5.16□□□□□ -1.58
LTBR-212ENST00000543542 C12orf77C9JDV5 145 aa5.16□□□□□ -1.58
LTBR-212ENST00000543542 RAB27BO00194 218 aa5.16□□□□□ -1.58
LTBR-212ENST00000543542 MFNGO00587 321 aa5.16□□□□□ -1.58
LTBR-212ENST00000543542 TCF21O43680 179 aa5.16□□□□□ -1.58
LTBR-212ENST00000543542 MMP23AO75900 390 aa5.16□□□□□ -1.58
LTBR-212ENST00000543542 RGS11O94810 467 aa5.16□□□□□ -1.58
LTBR-212ENST00000543542 HBZP02008 142 aa5.16□□□□□ -1.58
LTBR-212ENST00000543542 APOA1P02647 267 aa5.16□□□□□ -1.58
LTBR-212ENST00000543542 EIF4EP06730 217 aaKnown RBP5.16□□□□□ -1.58
LTBR-212ENST00000543542 GSTP1P09211 210 aaKnown RBP5.16□□□□□ -1.58
LTBR-212ENST00000543542 FBP1P09467 338 aa5.16□□□□□ -1.58
LTBR-212ENST00000543542 DLX6P56179 175 aa5.16□□□□□ -1.58
LTBR-212ENST00000543542 HLA-DRB3P79483 266 aa5.16□□□□□ -1.58
LTBR-212ENST00000543542 PITPNAQ00169 270 aa5.16□□□□□ -1.58
LTBR-212ENST00000543542 PAX5Q02548 391 aa5.16□□□□□ -1.58
LTBR-212ENST00000543542 MADCAM1Q13477 382 aa5.16□□□□□ -1.58
LTBR-212ENST00000543542 PNLIPRP3Q17RR3 467 aa5.16□□□□□ -1.58
LTBR-212ENST00000543542 HACD4Q5VWC8 232 aa5.16□□□□□ -1.58
LTBR-212ENST00000543542 BCL6BQ8N143 479 aaPredicted RBP5.16□□□□□ -1.58
LTBR-212ENST00000543542 OR10A7Q8NGE5 316 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms