RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 LPAR6P43657 344 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 PTTG1IPP53801 180 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 ZP4Q12836 540 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 GABRA6Q16445 453 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 TMEM182Q6ZP80 229 aaPredicted RBP6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 OR8G5Q8NG78 346 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 MED9Q9NWA0 146 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 AK3Q9UIJ7 227 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 ZFHX3Q15911 3703 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 DOPEY2Q9Y3R5 2298 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 MMP16P51512 607 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 TNXAQ16473 311 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 SHISA5Q8N114 240 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 OR5H6Q8NGV6 325 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 WDR13Q9H1Z4 485 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 NPAP1Q9NZP6 1156 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 SLC25A10Q9UBX3 287 aaPredicted RBP6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 PRSS50Q9UI38 385 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 ZNF835Q9Y2P0 537 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 TCF21O43680 179 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 DXOO77932 396 aaKnown RBP6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 IFI6P09912 130 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 FPR2P25090 351 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 MMP15P51511 669 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 ADIRFQ15847 76 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 MRPL23Q16540 153 aaKnown RBP6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 ZBTB37Q5TC79 503 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 LCN15Q6UWW0 184 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 OR10AC1Q8NH08 325 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 SLC52A3Q9NQ40 469 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 SF3B6Q9Y3B4 125 aaKnown RBP6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 OR5H14A6NHG9 310 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 M0R2Z0 102 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 DNASE2O00115 360 aaPredicted RBP6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 CA11O75493 328 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 SMIM10L1P0DMW3 83 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 SLC25A6P12236 298 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 MEOX2P50222 304 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 OR2B8PP59922 312 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 MPV17LQ2QL34 196 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 SP6Q3SY56 376 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 HIST2H3AQ71DI3 136 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 DOLPP1Q86YN1 238 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 APH1BQ8WW43 257 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 SMIM10Q96HG1 83 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 RAX2Q96IS3 184 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 OR13C7P0DN81 318 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 PSG4Q00888 419 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 OR2F1Q13607 317 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 HAGHQ16775 308 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 ZNF658BQ4V348 819 aaPredicted RBP6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 DBX2Q6ZNG2 339 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 KCNRGQ8N5I3 272 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 OR5M8Q8NGP6 311 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 OR13C6PQ8NH95 151 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 YIPF5Q969M3 257 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 TMEM147Q9BVK8 224 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 AAMDCQ9H7C9 122 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 ABCA4P78363 2273 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 A0A1B0GV90 55 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 RFPL4AA6NLU0 287 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 RFPL4AL1F8VTS6 287 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 F12P00748 615 aaPredicted RBP6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 FBP1P09467 338 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 TGM1P22735 817 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 UCP3P55916 312 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 TMEM41BQ5BJD5 291 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 SVBPQ8N300 66 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 OR52L2PQ8NGH6 319 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 IL22RA2Q969J5 263 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 PARP12Q9H0J9 701 aaKnown RBP6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 GPR27Q9NS67 375 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 COA4Q9NYJ1 87 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 TMED3Q9Y3Q3 217 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 IGHV3OR15-7A0A075B7D8 119 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 SNRPGP15A8MWD9 76 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 PYCARD-AS1I3L0S3 204 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 SLC31A2O15432 143 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 BCL3P20749 454 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 NAAAQ02083 359 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 HMGN3Q15651 99 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 LBHQ53QV2 105 aaPredicted RBP6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 OR10Z1Q8NGY1 313 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 OR2V2Q96R30 315 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 CHST5Q9GZS9 411 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 LOC102723971A0A1B0GUV8 181 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 GEMIN2O14893 280 aaKnown RBP6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 SEMA7AO75326 666 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 ASAH2BP0C7U1 165 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 CBR1P16152 277 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 GABRB1P18505 474 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 CD80P33681 288 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 CDKN1BP46527 198 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 ERVFRD-1P60508 538 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 ARF6P62330 175 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 ZNF562Q6V9R5 426 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 HGDQ93099 445 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 MS4A3Q96HJ5 214 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 HSD17B10Q99714 261 aaKnown RBP6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 PECRQ9BY49 303 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms