RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 RNF114Q9Y508 228 aa12.45□□□□□ -0.42
ECHDC2-223ENST00000542552 HILPDAQ9Y5L2 63 aa12.45□□□□□ -0.42
ECHDC2-223ENST00000542552 FAM172BPA6NC97 362 aa12.44□□□□□ -0.42
ECHDC2-223ENST00000542552 BUB1B-PAK6H3BSN5 160 aa12.44□□□□□ -0.42
ECHDC2-223ENST00000542552 VSIG8P0DPA2 414 aa12.44□□□□□ -0.42
ECHDC2-223ENST00000542552 JUNBP17275 347 aaPredicted RBP12.44□□□□□ -0.42
ECHDC2-223ENST00000542552 SSTR5P35346 364 aa12.44□□□□□ -0.42
ECHDC2-223ENST00000542552 PRRX1P54821 245 aa12.44□□□□□ -0.42
ECHDC2-223ENST00000542552 KRTAP10-3P60369 221 aa12.44□□□□□ -0.42
ECHDC2-223ENST00000542552 QRFPP83859 136 aa12.44□□□□□ -0.42
ECHDC2-223ENST00000542552 RBM39Q14498 530 aaKnown RBP12.44□□□□□ -0.42
ECHDC2-223ENST00000542552 SSX1Q16384 188 aa12.44□□□□□ -0.42
ECHDC2-223ENST00000542552 HLA-DRB5Q30154 266 aa12.44□□□□□ -0.42
ECHDC2-223ENST00000542552 RAB12Q6IQ22 244 aa12.44□□□□□ -0.42
ECHDC2-223ENST00000542552 SLC16A12Q6ZSM3 486 aa12.44□□□□□ -0.42
ECHDC2-223ENST00000542552 CREB3L1Q96BA8 519 aa12.44□□□□□ -0.42
ECHDC2-223ENST00000542552 CITED1Q99966 193 aa12.44□□□□□ -0.42
ECHDC2-223ENST00000542552 YTHDF1Q9BYJ9 559 aaKnown RBP12.44□□□□□ -0.42
ECHDC2-223ENST00000542552 CST11Q9H112 138 aa12.44□□□□□ -0.42
ECHDC2-223ENST00000542552 Q9H521 79 aa12.44□□□□□ -0.42
ECHDC2-223ENST00000542552 FBLN5Q9UBX5 448 aa12.44□□□□□ -0.42
ECHDC2-223ENST00000542552 RRP15Q9Y3B9 282 aaKnown RBP12.44□□□□□ -0.42
ECHDC2-223ENST00000542552 LEUTXA8MZ59 168 aa12.43□□□□□ -0.42
ECHDC2-223ENST00000542552 MCRIP1C9JLW8 97 aa12.43□□□□□ -0.42
ECHDC2-223ENST00000542552 C15orf65H3BRN8 121 aa12.43□□□□□ -0.42
ECHDC2-223ENST00000542552 TOR1AO14656 332 aa12.43□□□□□ -0.42
ECHDC2-223ENST00000542552 ARL6IP5O75915 188 aa12.43□□□□□ -0.42
ECHDC2-223ENST00000542552 FUT3P21217 361 aa12.43□□□□□ -0.42
ECHDC2-223ENST00000542552 NFYBP25208 207 aa12.43□□□□□ -0.42
ECHDC2-223ENST00000542552 KIR2DS4P43632 304 aa12.43□□□□□ -0.42
ECHDC2-223ENST00000542552 SRSF4Q08170 494 aaKnown RBP12.43□□□□□ -0.42
ECHDC2-223ENST00000542552 CD200R1LQ6Q8B3 271 aa12.43□□□□□ -0.42
ECHDC2-223ENST00000542552 OR9G1Q8NH87 305 aa12.43□□□□□ -0.42
ECHDC2-223ENST00000542552 RFESDQ8TAC1 157 aa12.43□□□□□ -0.42
ECHDC2-223ENST00000542552 FAM46BQ96A09 425 aa12.43□□□□□ -0.42
ECHDC2-223ENST00000542552 RANBP3Q9H6Z4 567 aaPredicted RBP12.43□□□□□ -0.42
ECHDC2-223ENST00000542552 ABCB10Q9NRK6 738 aa12.43□□□□□ -0.42
ECHDC2-223ENST00000542552 PITPNC1Q9UKF7 332 aa12.43□□□□□ -0.42
ECHDC2-223ENST00000542552 PEX16Q9Y5Y5 336 aa12.43□□□□□ -0.42
ECHDC2-223ENST00000542552 TMEM14DPA8MWL7 114 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 H3BUI4 141 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 J3QR06 171 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 ORC5O43913 435 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 PDCD6O75340 191 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 CA11O75493 328 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 MPIG6BO95866 241 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 HTR2CP28335 458 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 RPS27AP62979 156 aaKnown RBP12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 UNC119Q13432 240 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 PRR31Q5SQ13 230 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 TPTE2P1Q5T6R2 138 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 UBE2UQ5VVX9 321 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 OR10K2Q6IF99 312 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 SPARTQ8N0X7 666 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 OR52M1Q8NGK5 317 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 OR6M1Q8NGM8 313 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 KCNG3Q8TAE7 436 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 NEK7Q8TDX7 302 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 CCDC107Q8WV48 283 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 LEAP2Q969E1 77 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 CYYR1Q96J86 154 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 MMP28Q9H239 520 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 ZNF696Q9H7X3 374 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 NDUFB11Q9NX14 153 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 ETAA1Q9NY74 926 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 PSG11Q9UQ72 335 aa12.42□□□□□ -0.42
ECHDC2-223ENST00000542552 OOSP1A8MZH6 123 aa12.41□□□□□ -0.42
ECHDC2-223ENST00000542552 AIPO00170 330 aa12.41□□□□□ -0.42
ECHDC2-223ENST00000542552 F2RL2O00254 374 aa12.41□□□□□ -0.42
ECHDC2-223ENST00000542552 SLC17A2O00624 439 aa12.41□□□□□ -0.42
ECHDC2-223ENST00000542552 BPNT1O95861 308 aa12.41□□□□□ -0.42
ECHDC2-223ENST00000542552 CALRP27797 417 aaKnown RBP12.41□□□□□ -0.42
ECHDC2-223ENST00000542552 CHATP28329 748 aa12.41□□□□□ -0.42
ECHDC2-223ENST00000542552 CEACAM3P40198 252 aa12.41□□□□□ -0.42
ECHDC2-223ENST00000542552 EFNB2P52799 333 aa12.41□□□□□ -0.42
ECHDC2-223ENST00000542552 LOXL3P58215 753 aa12.41□□□□□ -0.42
ECHDC2-223ENST00000542552 TMEM219Q86XT9 240 aa12.41□□□□□ -0.42
ECHDC2-223ENST00000542552 OR4C13Q8NGP0 309 aa12.41□□□□□ -0.42
ECHDC2-223ENST00000542552 ARL11Q969Q4 196 aa12.41□□□□□ -0.42
ECHDC2-223ENST00000542552 TM2D1Q9BX74 207 aa12.41□□□□□ -0.42
ECHDC2-223ENST00000542552 NPFFR1Q9GZQ6 430 aa12.41□□□□□ -0.42
ECHDC2-223ENST00000542552 AK6Q9Y3D8 172 aaKnown RBP12.41□□□□□ -0.42
ECHDC2-223ENST00000542552 LRRC42Q9Y546 428 aa12.41□□□□□ -0.42
ECHDC2-223ENST00000542552 C12orf77C9JDV5 145 aa12.4□□□□□ -0.42
ECHDC2-223ENST00000542552 LTC4SQ16873 150 aa12.4□□□□□ -0.42
ECHDC2-223ENST00000542552 SYT6Q5T7P8 510 aaPredicted RBP12.4□□□□□ -0.42
ECHDC2-223ENST00000542552 Q8N2B8 174 aa12.4□□□□□ -0.42
ECHDC2-223ENST00000542552 SVOPQ8N4V2 548 aa12.4□□□□□ -0.42
ECHDC2-223ENST00000542552 C8orf31Q8N9H6 132 aa12.4□□□□□ -0.42
ECHDC2-223ENST00000542552 TMEM59Q9BXS4 323 aa12.4□□□□□ -0.42
ECHDC2-223ENST00000542552 KCNK15Q9H427 330 aa12.4□□□□□ -0.42
ECHDC2-223ENST00000542552 MBNL3Q9NUK0 354 aaKnown RBP12.4□□□□□ -0.42
ECHDC2-223ENST00000542552 SIGLEC9Q9Y336 463 aa12.4□□□□□ -0.42
ECHDC2-223ENST00000542552 TRAV1-2A0A0B4J238 106 aa12.39□□□□□ -0.43
ECHDC2-223ENST00000542552 TRDV1A0A1B0GX56 115 aa12.39□□□□□ -0.43
ECHDC2-223ENST00000542552 UBE2QL1A1L167 161 aa12.39□□□□□ -0.43
ECHDC2-223ENST00000542552 IGHV3-7P01780 117 aa12.39□□□□□ -0.43
ECHDC2-223ENST00000542552 RCC1P18754 421 aaPredicted RBP12.39□□□□□ -0.43
ECHDC2-223ENST00000542552 GALP22466 123 aa12.39□□□□□ -0.43
ECHDC2-223ENST00000542552 BRS3P32247 399 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms