RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 TSC22D3Q99576 134 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 ST6GALNAC5Q9BVH7 336 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 SSBP3Q9BWW4 388 aaPredicted RBP7.71□□□□□ -1.18
DDX55-208ENST00000541259 LPAR2Q9HBW0 351 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 CHMP1AQ9HD42 196 aaPredicted RBP7.71□□□□□ -1.18
DDX55-208ENST00000541259 KLK11Q9UBX7 282 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 ACANP16112 2415 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 TEX15Q9BXT5 2789 aa7.7□□□□□ -1.18
DDX55-208ENST00000541259 LOC105371242A0A075B767 164 aa7.7□□□□□ -1.18
DDX55-208ENST00000541259 TRBV6-6A0A0A6YYG2 114 aa7.7□□□□□ -1.18
DDX55-208ENST00000541259 FAM229AH3BQW9 127 aa7.7□□□□□ -1.18
DDX55-208ENST00000541259 GABARAPH6UMI1 98 aa7.7□□□□□ -1.18
DDX55-208ENST00000541259 GSTZ1O43708 216 aaPredicted RBP7.7□□□□□ -1.18
DDX55-208ENST00000541259 VAMP1P23763 118 aa7.7□□□□□ -1.18
DDX55-208ENST00000541259 NPY4RP50391 375 aa7.7□□□□□ -1.18
DDX55-208ENST00000541259 ERVFRD-1P60508 538 aa7.7□□□□□ -1.18
DDX55-208ENST00000541259 RPL31P62899 125 aaKnown RBP7.7□□□□□ -1.18
DDX55-208ENST00000541259 MRPS15P82914 257 aaKnown RBP7.7□□□□□ -1.18
DDX55-208ENST00000541259 PAX5Q02548 391 aa7.7□□□□□ -1.18
DDX55-208ENST00000541259 LOXL1Q08397 574 aaPredicted RBP7.7□□□□□ -1.18
DDX55-208ENST00000541259 ZNF273Q14593 569 aa7.7□□□□□ -1.18
DDX55-208ENST00000541259 ZNF846Q147U1 533 aa7.7□□□□□ -1.18
DDX55-208ENST00000541259 BAK1Q16611 211 aa7.7□□□□□ -1.18
DDX55-208ENST00000541259 FAM185AQ8N0U4 392 aa7.7□□□□□ -1.18
DDX55-208ENST00000541259 Q8N402 240 aa7.7□□□□□ -1.18
DDX55-208ENST00000541259 LY6G5BQ8NDX9 201 aa7.7□□□□□ -1.18
DDX55-208ENST00000541259 MRGPRDQ8TDS7 321 aa7.7□□□□□ -1.18
DDX55-208ENST00000541259 FCAMRQ8WWV6 532 aa7.7□□□□□ -1.18
DDX55-208ENST00000541259 S100ZQ8WXG8 99 aa7.7□□□□□ -1.18
DDX55-208ENST00000541259 RAB39BQ96DA2 213 aa7.7□□□□□ -1.18
DDX55-208ENST00000541259 Q9N2K0 584 aa7.7□□□□□ -1.18
DDX55-208ENST00000541259 C12orf4Q9NQ89 552 aa7.7□□□□□ -1.18
DDX55-208ENST00000541259 RABL2AQ9UBK7 228 aaPredicted RBP7.7□□□□□ -1.18
DDX55-208ENST00000541259 TRAPPC2LQ9UL33 140 aa7.7□□□□□ -1.18
DDX55-208ENST00000541259 RABL2BQ9UNT1 228 aa7.7□□□□□ -1.18
DDX55-208ENST00000541259 CREBBPQ92793 2442 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 ANK3Q12955 4377 aaKnown RBP7.69□□□□□ -1.18
DDX55-208ENST00000541259 FUOMA2VDF0 154 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 SULT1C2O00338 296 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 ORC5O43913 435 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 FBXO24O75426 580 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 LPLP06858 475 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 SCTP09683 121 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 GSTT2P0CG29 244 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 GSTT2BP0CG30 244 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 CGB3P0DN86 165 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 CGB7P0DN87 165 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 CCL3L1P16619 93 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 GLP1RP43220 463 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 PPP5CP53041 499 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 DLX6P56179 175 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 PAX2Q02962 417 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 MEF2CQ06413 473 aaPredicted RBP7.69□□□□□ -1.18
DDX55-208ENST00000541259 C17orf58Q2M2W7 97 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 OR52W1Q6IF63 320 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 FAM53AQ6NSI3 398 aaPredicted RBP7.69□□□□□ -1.18
DDX55-208ENST00000541259 HOGA1Q86XE5 327 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 LYSMD2Q8IV50 215 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 GDPD1Q8N9F7 314 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 OR1L1Q8NH94 360 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 RFESDQ8TAC1 157 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 C8orf46Q8TAG6 207 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 C15orf40Q8WUR7 153 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 SMIM4Q8WVI0 70 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 CORO2AQ92828 525 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 SNAPC3Q92966 411 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 DACT3Q96B18 629 aaPredicted RBP7.69□□□□□ -1.18
DDX55-208ENST00000541259 THAP7Q9BT49 309 aaPredicted RBP7.69□□□□□ -1.18
DDX55-208ENST00000541259 RIMS4Q9H426 269 aaPredicted RBP7.69□□□□□ -1.18
DDX55-208ENST00000541259 NCOR1P1Q9H4R4 102 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 SCPEP1Q9HB40 452 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 MMP26Q9NRE1 261 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 MBNL3Q9NUK0 354 aaKnown RBP7.69□□□□□ -1.18
DDX55-208ENST00000541259 MTFP1Q9UDX5 166 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 RPUSD1Q9UJJ7 312 aaKnown RBP7.69□□□□□ -1.18
DDX55-208ENST00000541259 ANAPC10Q9UM13 185 aa7.69□□□□□ -1.18
DDX55-208ENST00000541259 CSPG4Q6UVK1 2322 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 TRGV10A0A0A0MS01 117 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 TRBV23-1A0A0A0MS06 115 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 PPIAL4CA0A0B4J2A2 164 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 A0A1W2PQ09 198 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 hADV38S2A0JD32 116 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 A8MXK9 166 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 C12orf77C9JDV5 145 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 C15orf65H3BRN8 121 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 H7C1Q1 480 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 SMAD7O15105 426 aaKnown RBP7.68□□□□□ -1.18
DDX55-208ENST00000541259 FOXH1O75593 365 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 RBBP9O75884 186 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 MMP23AO75900 390 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 ECDO95905 644 aaPredicted RBP7.68□□□□□ -1.18
DDX55-208ENST00000541259 PPIAL4GP0DN37 164 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 NAT1P18440 290 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 OMGP23515 440 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 DTYMKP23919 212 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 CD40LGP29965 261 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 SSTR5P35346 364 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 GDNFP39905 211 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 CBX5P45973 191 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 DLX1P56177 255 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms