RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 SOCS1O15524 211 aa15.34■□□□□ 0.05
VPS33A-205ENST00000541169 CLEC2LP0C7M8 214 aa15.34■□□□□ 0.05
VPS33A-205ENST00000541169 CD34P28906 385 aa15.34■□□□□ 0.05
VPS33A-205ENST00000541169 NCS1P62166 190 aa15.34■□□□□ 0.05
VPS33A-205ENST00000541169 Q3ZCU0 254 aa15.34■□□□□ 0.05
VPS33A-205ENST00000541169 OR13A1Q8NGR1 328 aa15.34■□□□□ 0.05
VPS33A-205ENST00000541169 ZNF596Q8TC21 504 aa15.34■□□□□ 0.05
VPS33A-205ENST00000541169 CMTM3Q96MX0 182 aa15.34■□□□□ 0.05
VPS33A-205ENST00000541169 SULT4A1Q9BR01 284 aa15.34■□□□□ 0.05
VPS33A-205ENST00000541169 CLEC7AQ9BXN2 247 aa15.34■□□□□ 0.05
VPS33A-205ENST00000541169 C12orf4Q9NQ89 552 aa15.34■□□□□ 0.05
VPS33A-205ENST00000541169 MBNL3Q9NUK0 354 aaKnown RBP15.34■□□□□ 0.05
VPS33A-205ENST00000541169 TBL2Q9Y4P3 447 aaKnown RBP15.34■□□□□ 0.05
VPS33A-205ENST00000541169 SETD2Q9BYW2 2564 aaPredicted RBP15.33■□□□□ 0.05
VPS33A-205ENST00000541169 A0A0A6YYD4 124 aa15.33■□□□□ 0.04
VPS33A-205ENST00000541169 RAB27BO00194 218 aa15.33■□□□□ 0.04
VPS33A-205ENST00000541169 NAPSAO96009 420 aa15.33■□□□□ 0.04
VPS33A-205ENST00000541169 FBP1P09467 338 aa15.33■□□□□ 0.04
VPS33A-205ENST00000541169 PRRX1P54821 245 aa15.33■□□□□ 0.04
VPS33A-205ENST00000541169 C17orf58Q2M2W7 97 aa15.33■□□□□ 0.04
VPS33A-205ENST00000541169 LGALS14Q8TCE9 139 aa15.33■□□□□ 0.04
VPS33A-205ENST00000541169 MRGPRDQ8TDS7 321 aa15.33■□□□□ 0.04
VPS33A-205ENST00000541169 PECRQ9BY49 303 aa15.33■□□□□ 0.04
VPS33A-205ENST00000541169 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.33■□□□□ 0.04
VPS33A-205ENST00000541169 RHBDL2Q9NX52 303 aa15.33■□□□□ 0.04
VPS33A-205ENST00000541169 IDI2-AS1Q9NZ38 188 aa15.33■□□□□ 0.04
VPS33A-205ENST00000541169 PAHP00439 452 aa15.32■□□□□ 0.04
VPS33A-205ENST00000541169 SNRPBP14678 240 aaKnown RBP15.32■□□□□ 0.04
VPS33A-205ENST00000541169 SOX6P35712 828 aa15.32■□□□□ 0.04
VPS33A-205ENST00000541169 TMEM50BP56557 158 aa15.32■□□□□ 0.04
VPS33A-205ENST00000541169 HILS1P60008 231 aa15.32■□□□□ 0.04
VPS33A-205ENST00000541169 PITPNAQ00169 270 aa15.32■□□□□ 0.04
VPS33A-205ENST00000541169 MINOS1Q5TGZ0 78 aa15.32■□□□□ 0.04
VPS33A-205ENST00000541169 ZNF626Q68DY1 528 aa15.32■□□□□ 0.04
VPS33A-205ENST00000541169 HCP5Q6MZN7 132 aa15.32■□□□□ 0.04
VPS33A-205ENST00000541169 BRD3OSQ6XYD6 125 aa15.32■□□□□ 0.04
VPS33A-205ENST00000541169 ZNF782Q6ZMW2 699 aaPredicted RBP15.32■□□□□ 0.04
VPS33A-205ENST00000541169 CLVS1Q8IUQ0 354 aaPredicted RBP15.32■□□□□ 0.04
VPS33A-205ENST00000541169 PNKDQ8N490 385 aa15.32■□□□□ 0.04
VPS33A-205ENST00000541169 ZFAND2BQ8WV99 257 aa15.32■□□□□ 0.04
VPS33A-205ENST00000541169 ARL11Q969Q4 196 aa15.32■□□□□ 0.04
VPS33A-205ENST00000541169 ARHGAP5-AS1Q96IT6 56 aa15.32■□□□□ 0.04
VPS33A-205ENST00000541169 KIRREL1Q96J84 757 aa15.32■□□□□ 0.04
VPS33A-205ENST00000541169 SLC6A7Q99884 636 aa15.32■□□□□ 0.04
VPS33A-205ENST00000541169 DCSTAMPQ9H295 470 aa15.32■□□□□ 0.04
VPS33A-205ENST00000541169 CHMP1AQ9HD42 196 aaPredicted RBP15.32■□□□□ 0.04
VPS33A-205ENST00000541169 DIABLOQ9NR28 239 aa15.32■□□□□ 0.04
VPS33A-205ENST00000541169 MINOS1-NBL1R4GNA1 71 aa15.32■□□□□ 0.04
VPS33A-205ENST00000541169 IGHV2-26A0A0B4J1V2 119 aa15.31■□□□□ 0.04
VPS33A-205ENST00000541169 A0A0B4J203 849 aa15.31■□□□□ 0.04
VPS33A-205ENST00000541169 F2RL2O00254 374 aa15.31■□□□□ 0.04
VPS33A-205ENST00000541169 TOR1AO14656 332 aa15.31■□□□□ 0.04
VPS33A-205ENST00000541169 GSTP1P09211 210 aaKnown RBP15.31■□□□□ 0.04
VPS33A-205ENST00000541169 CD3GP09693 182 aa15.31■□□□□ 0.04
VPS33A-205ENST00000541169 HIST1H1DP16402 221 aaKnown RBP15.31■□□□□ 0.04
VPS33A-205ENST00000541169 SAA4P35542 130 aa15.31■□□□□ 0.04
VPS33A-205ENST00000541169 EFNB2P52799 333 aa15.31■□□□□ 0.04
VPS33A-205ENST00000541169 AANATQ16613 207 aa15.31■□□□□ 0.04
VPS33A-205ENST00000541169 PLAC9Q5JTB6 97 aa15.31■□□□□ 0.04
VPS33A-205ENST00000541169 MZT2AQ6P582 158 aa15.31■□□□□ 0.04
VPS33A-205ENST00000541169 ABHD12Q8N2K0 398 aa15.31■□□□□ 0.04
VPS33A-205ENST00000541169 PIP4P2Q8N4L2 257 aa15.31■□□□□ 0.04
VPS33A-205ENST00000541169 TMEM86BQ8N661 226 aa15.31■□□□□ 0.04
VPS33A-205ENST00000541169 C8orf31Q8N9H6 132 aa15.31■□□□□ 0.04
VPS33A-205ENST00000541169 BEND2Q8NDZ0 799 aa15.31■□□□□ 0.04
VPS33A-205ENST00000541169 OR4K15Q8NH41 348 aa15.31■□□□□ 0.04
VPS33A-205ENST00000541169 MRPL30Q8TCC3 161 aaKnown RBP15.31■□□□□ 0.04
VPS33A-205ENST00000541169 ZDHHC16Q969W1 377 aa15.31■□□□□ 0.04
VPS33A-205ENST00000541169 MALSU1Q96EH3 234 aa15.31■□□□□ 0.04
VPS33A-205ENST00000541169 S100A16Q96FQ6 103 aaKnown RBP15.31■□□□□ 0.04
VPS33A-205ENST00000541169 CMSS1Q9BQ75 279 aaKnown RBP15.31■□□□□ 0.04
VPS33A-205ENST00000541169 ABCG5Q9H222 651 aa15.31■□□□□ 0.04
VPS33A-205ENST00000541169 KIAA2026Q5HYC2 2103 aa15.31■□□□□ 0.04
VPS33A-205ENST00000541169 MXRA5Q9NR99 2828 aa15.3■□□□□ 0.04
VPS33A-205ENST00000541169 IGHV3OR16-10A0A075B7F0 116 aa15.3■□□□□ 0.04
VPS33A-205ENST00000541169 MEIOCA2RUB1 952 aa15.3■□□□□ 0.04
VPS33A-205ENST00000541169 CLDN34H7C241 214 aa15.3■□□□□ 0.04
VPS33A-205ENST00000541169 ZNF182P17025 639 aaPredicted RBP15.3■□□□□ 0.04
VPS33A-205ENST00000541169 TGFBR1P36897 503 aa15.3■□□□□ 0.04
VPS33A-205ENST00000541169 CEACAM3P40198 252 aa15.3■□□□□ 0.04
VPS33A-205ENST00000541169 HTD2P86397 168 aa15.3■□□□□ 0.04
VPS33A-205ENST00000541169 SRSF7Q16629 238 aaKnown RBP eCLIP15.3■□□□□ 0.04
VPS33A-205ENST00000541169 KRTAP21-3Q3LHN1 58 aa15.3■□□□□ 0.04
VPS33A-205ENST00000541169 UBE2NLQ5JXB2 153 aa15.3■□□□□ 0.04
VPS33A-205ENST00000541169 PRAMEF5Q5TYX0 476 aa15.3■□□□□ 0.04
VPS33A-205ENST00000541169 STEAP3Q658P3 488 aa15.3■□□□□ 0.04
VPS33A-205ENST00000541169 OR9G1Q8NH87 305 aa15.3■□□□□ 0.04
VPS33A-205ENST00000541169 CCDC107Q8WV48 283 aa15.3■□□□□ 0.04
VPS33A-205ENST00000541169 DYRK2Q92630 601 aa15.3■□□□□ 0.04
VPS33A-205ENST00000541169 GALMQ96C23 342 aa15.3■□□□□ 0.04
VPS33A-205ENST00000541169 NAA50Q9GZZ1 169 aaKnown RBP15.3■□□□□ 0.04
VPS33A-205ENST00000541169 DPAGT1Q9H3H5 408 aa15.3■□□□□ 0.04
VPS33A-205ENST00000541169 AK3Q9UIJ7 227 aa15.3■□□□□ 0.04
VPS33A-205ENST00000541169 AMMECR1Q9Y4X0 333 aaPredicted RBP15.3■□□□□ 0.04
VPS33A-205ENST00000541169 POMT1Q9Y6A1 747 aa15.3■□□□□ 0.04
VPS33A-205ENST00000541169 NF1P21359 2839 aa15.3■□□□□ 0.04
VPS33A-205ENST00000541169 MEX3AA1L020 520 aaKnown RBP15.29■□□□□ 0.04
VPS33A-205ENST00000541169 ODF3BA8MYP8 253 aa15.29■□□□□ 0.04
VPS33A-205ENST00000541169 C15orf65H3BRN8 121 aa15.29■□□□□ 0.04
VPS33A-205ENST00000541169 MFNGO00587 321 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms