RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 NGFP01138 241 aa8.87□□□□□ -0.99
CDC42SE1-207ENST00000540998 PSG2P11465 335 aa8.87□□□□□ -0.99
CDC42SE1-207ENST00000540998 COL8A2P25067 703 aa8.87□□□□□ -0.99
CDC42SE1-207ENST00000540998 CLDN15P56746 228 aa8.87□□□□□ -0.99
CDC42SE1-207ENST00000540998 LHFPL2Q6ZUX7 228 aa8.87□□□□□ -0.99
CDC42SE1-207ENST00000540998 CCDC71LQ8N9Z2 235 aa8.87□□□□□ -0.99
CDC42SE1-207ENST00000540998 KIAA1456Q9P272 454 aa8.87□□□□□ -0.99
CDC42SE1-207ENST00000540998 TNRC18O15417 2968 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE1-207ENST00000540998 CNOT4O95628 575 aaKnown RBP8.87□□□□□ -0.99
CDC42SE1-207ENST00000540998 RTP5Q14D33 572 aa8.87□□□□□ -0.99
CDC42SE1-207ENST00000540998 NMSQ5H8A3 153 aa8.87□□□□□ -0.99
CDC42SE1-207ENST00000540998 RTL6Q6ICC9 239 aa8.87□□□□□ -0.99
CDC42SE1-207ENST00000540998 HIST3H2BBQ8N257 126 aa8.87□□□□□ -0.99
CDC42SE1-207ENST00000540998 TVP23CQ96ET8 276 aa8.87□□□□□ -0.99
CDC42SE1-207ENST00000540998 UFSP2Q9NUQ7 469 aa8.87□□□□□ -0.99
CDC42SE1-207ENST00000540998 OR1A1Q9P1Q5 309 aa8.87□□□□□ -0.99
CDC42SE1-207ENST00000540998 RP1L1Q8IWN7 2480 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 OR6C6A6NF89 314 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 SELEP16581 610 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 CD200P41217 278 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 RAB1AP62820 205 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 NKX6-1P78426 367 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 DEFA6Q01524 100 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 FAM90A2PQ658T7 463 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 FOXL2NBQ6ZUU3 175 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 RNASE11Q8TAA1 199 aaKnown RBP8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 C14orf144Q96I85 54 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 MTCH1Q9NZJ7 389 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 DMRT1Q9Y5R6 373 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 ICE1Q9Y2F5 2266 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 LOC102725191A0A1B0GVB3 256 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 PINLYPA6NC86 204 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 ZNF729A6NN14 1252 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 TK1P04183 234 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 SRFP11831 508 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 CARD18P57730 90 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 EXT1Q16394 746 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 MRPL14Q6P1L8 145 aaKnown RBP8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 LRP11Q86VZ4 500 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 LFNGQ8NES3 379 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 OR5T1Q8NG75 326 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 GATAD1Q8WUU5 269 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 GPR146Q96CH1 333 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 PRRG4Q9BZD6 226 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 ZNF552Q9H707 407 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 AURKAIP1Q9NWT8 199 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 PPP1R3CQ9UQK1 317 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 MED13Q9UHV7 2174 aa8.86□□□□□ -0.99
CDC42SE1-207ENST00000540998 IGHV1-45A0A0A0MS14 117 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 KIAA1324LA8MWY0 1029 aaPredicted RBP8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 PPP1R2P9O14990 202 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 COX6A1P12074 109 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 DSCR4P56555 118 aaPredicted RBP8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 TMEM42Q69YG0 159 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 KMT5CQ86Y97 462 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 CADM4Q8NFZ8 388 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 OR10D3Q8NH80 312 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 RBMXL1Q96E39 390 aaKnown RBP8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 FAM210BQ96KR6 192 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 RNF115Q9Y4L5 304 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 C5orf49A4QMS7 147 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 ZNF716A6NP11 495 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 CDS2O95674 445 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 GLIPR1P48060 266 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 FUT6P51993 359 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 ZFP36L1Q07352 338 aaKnown RBP8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 SPATA46Q5T0L3 261 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 GGNQ86UU5 652 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 C1QL4Q86Z23 238 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 ZDHHC23Q8IYP9 409 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 ELOVL1Q9BW60 279 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 ZNF576Q9H609 170 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 Q9N2K0 584 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 TREM2Q9NZC2 230 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 ERRFI1Q9UJM3 462 aaPredicted RBP8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 CEBPZOSA8MTT3 80 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 HSPA12AO43301 675 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 PGLYRP1O75594 196 aaPredicted RBP8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 KLF7O75840 302 aaPredicted RBP8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 CELA3AP09093 270 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 SNRPCP09234 159 aaKnown RBP8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 SSR4P51571 173 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 B3GALT5-AS1P59052 145 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 HLA-DRB3P79483 266 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 PRDX4Q13162 271 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 RAB30Q15771 203 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 ZNF506Q5JVG8 444 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 Q6ZSR3 168 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 HAPLN4Q86UW8 402 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 RPS19BP1Q86WX3 136 aaKnown RBP8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 TMEM56Q96MV1 263 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 PLK3Q9H4B4 646 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 DEPPQ9NTK1 212 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 CACNG5Q9UF02 275 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 TMEM56-RWDD3S4R434 201 aa8.85□□□□□ -0.99
CDC42SE1-207ENST00000540998 ZNF816-ZNF321PA0A0X1KG74 233 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 ZNF732B4DXR9 585 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 SEC14L6B5MCN3 397 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 RPL36A-HNRNPH2H7BZ11 118 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 IGKV1-39P01597 117 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms