RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 PLSCR3Q9NRY6 295 aa20.93■□□□□ 0.94
CHFR-218ENST00000540963 CHCHD3Q9NX63 227 aaKnown RBP20.93■□□□□ 0.94
CHFR-218ENST00000540963 EXOGQ9Y2C4 368 aaKnown RBP20.93■□□□□ 0.94
CHFR-218ENST00000540963 HTR1AP08908 422 aa20.92■□□□□ 0.94
CHFR-218ENST00000540963 OR5H8P0DN80 308 aa20.92■□□□□ 0.94
CHFR-218ENST00000540963 LYL1P12980 280 aa20.92■□□□□ 0.94
CHFR-218ENST00000540963 GZMHP20718 246 aa20.92■□□□□ 0.94
CHFR-218ENST00000540963 VDAC1P21796 283 aa20.92■□□□□ 0.94
CHFR-218ENST00000540963 SSTR5P35346 364 aa20.92■□□□□ 0.94
CHFR-218ENST00000540963 ALDH3A2P51648 485 aa20.92■□□□□ 0.94
CHFR-218ENST00000540963 LTC4SQ16873 150 aa20.92■□□□□ 0.94
CHFR-218ENST00000540963 SBSPONQ8IVN8 264 aa20.92■□□□□ 0.94
CHFR-218ENST00000540963 OR52M1Q8NGK5 317 aa20.92■□□□□ 0.94
CHFR-218ENST00000540963 MYOZ3Q8TDC0 251 aa20.92■□□□□ 0.94
CHFR-218ENST00000540963 LGALS12Q96DT0 336 aa20.92■□□□□ 0.94
CHFR-218ENST00000540963 RASL11BQ9BPW5 248 aa20.92■□□□□ 0.94
CHFR-218ENST00000540963 LCE6AA0A183 80 aa20.91■□□□□ 0.94
CHFR-218ENST00000540963 SLC16A6O15403 523 aa20.91■□□□□ 0.94
CHFR-218ENST00000540963 MOSP00540 346 aa20.91■□□□□ 0.94
CHFR-218ENST00000540963 IGF1P05019 195 aa20.91■□□□□ 0.94
CHFR-218ENST00000540963 HCKP08631 526 aa20.91■□□□□ 0.94
CHFR-218ENST00000540963 OR8U8P0C7N1 319 aa20.91■□□□□ 0.94
CHFR-218ENST00000540963 SERPINA12Q8IW75 414 aa20.91■□□□□ 0.94
CHFR-218ENST00000540963 TMEM104Q8NE00 496 aa20.91■□□□□ 0.94
CHFR-218ENST00000540963 OR11H1Q8NG94 326 aa20.91■□□□□ 0.94
CHFR-218ENST00000540963 OR5D14Q8NGL3 314 aa20.91■□□□□ 0.94
CHFR-218ENST00000540963 CPNE2Q96FN4 548 aaPredicted RBP20.91■□□□□ 0.94
CHFR-218ENST00000540963 S1PR3Q99500 378 aa20.91■□□□□ 0.94
CHFR-218ENST00000540963 FAM118AQ9NWS6 357 aa20.91■□□□□ 0.94
CHFR-218ENST00000540963 IGHV3-72A0A0B4J1Y9 119 aa20.9■□□□□ 0.94
CHFR-218ENST00000540963 SULT1B1O43704 296 aa20.9■□□□□ 0.94
CHFR-218ENST00000540963 LY86O95711 162 aa20.9■□□□□ 0.94
CHFR-218ENST00000540963 RUNX1Q01196 453 aa20.9■□□□□ 0.94
CHFR-218ENST00000540963 FAM27D1Q5T7N8 215 aa20.9■□□□□ 0.94
CHFR-218ENST00000540963 ZNF691Q5VV52 312 aa20.9■□□□□ 0.94
CHFR-218ENST00000540963 ZNF429Q86V71 674 aa20.9■□□□□ 0.94
CHFR-218ENST00000540963 PLPPR1Q8TBJ4 325 aa20.9■□□□□ 0.94
CHFR-218ENST00000540963 PELI1Q96FA3 418 aa20.9■□□□□ 0.94
CHFR-218ENST00000540963 IMPAD1Q9NX62 359 aa20.9■□□□□ 0.94
CHFR-218ENST00000540963 OR4C45A6NMZ5 311 aa20.89■□□□□ 0.93
CHFR-218ENST00000540963 IL3RAP26951 378 aa20.89■□□□□ 0.93
CHFR-218ENST00000540963 SOX6P35712 828 aa20.89■□□□□ 0.93
CHFR-218ENST00000540963 REG1BP48304 166 aa20.89■□□□□ 0.93
CHFR-218ENST00000540963 Q3ZCU0 254 aa20.89■□□□□ 0.93
CHFR-218ENST00000540963 FAM71E2Q8N5Q1 922 aa20.89■□□□□ 0.93
CHFR-218ENST00000540963 PARP16Q8N5Y8 322 aa20.89■□□□□ 0.93
CHFR-218ENST00000540963 RTN4IP1Q8WWV3 396 aaPredicted RBP20.89■□□□□ 0.93
CHFR-218ENST00000540963 ST6GALNAC6Q969X2 333 aa20.89■□□□□ 0.93
CHFR-218ENST00000540963 UBE2E2Q96LR5 201 aa20.89■□□□□ 0.93
CHFR-218ENST00000540963 NR1H4Q96RI1 486 aaPredicted RBP20.89■□□□□ 0.93
CHFR-218ENST00000540963 LYSTQ99698 3801 aa20.89■□□□□ 0.93
CHFR-218ENST00000540963 EPPK1P58107 5090 aaKnown RBP20.89■□□□□ 0.93
CHFR-218ENST00000540963 BIRC6Q9NR09 4857 aa20.89■□□□□ 0.93
CHFR-218ENST00000540963 A0A1W2PPE3 182 aa20.88■□□□□ 0.93
CHFR-218ENST00000540963 DAPL1A0PJW8 107 aa20.88■□□□□ 0.93
CHFR-218ENST00000540963 TXNL1O43396 289 aa20.88■□□□□ 0.93
CHFR-218ENST00000540963 RHOXF1Q8NHV9 184 aa20.88■□□□□ 0.93
CHFR-218ENST00000540963 IFT22Q9H7X7 185 aa20.88■□□□□ 0.93
CHFR-218ENST00000540963 ISG20L2Q9H9L3 353 aaKnown RBP20.88■□□□□ 0.93
CHFR-218ENST00000540963 PALMDQ9NP74 551 aa20.88■□□□□ 0.93
CHFR-218ENST00000540963 E9PI62 339 aa20.87■□□□□ 0.93
CHFR-218ENST00000540963 ALKBH1Q13686 389 aaKnown RBP20.87■□□□□ 0.93
CHFR-218ENST00000540963 MEDAGQ5VYS4 303 aa20.87■□□□□ 0.93
CHFR-218ENST00000540963 ZFP1Q6P2D0 407 aa20.87■□□□□ 0.93
CHFR-218ENST00000540963 KCTD7Q96MP8 289 aa20.87■□□□□ 0.93
CHFR-218ENST00000540963 HSPB9Q9BQS6 159 aa20.87■□□□□ 0.93
CHFR-218ENST00000540963 ZMAT4Q9H898 229 aa20.87■□□□□ 0.93
CHFR-218ENST00000540963 I3L521 148 aa20.86■□□□□ 0.93
CHFR-218ENST00000540963 J3QLW9 94 aa20.86■□□□□ 0.93
CHFR-218ENST00000540963 ZNF19P17023 458 aa20.86■□□□□ 0.93
CHFR-218ENST00000540963 ZNF616Q08AN1 781 aa20.86■□□□□ 0.93
CHFR-218ENST00000540963 LHFPL3Q86UP9 236 aa20.86■□□□□ 0.93
CHFR-218ENST00000540963 ACBD7Q8N6N7 88 aa20.86■□□□□ 0.93
CHFR-218ENST00000540963 OR1N2Q8NGR9 330 aa20.86■□□□□ 0.93
CHFR-218ENST00000540963 C4orf36Q96KX1 117 aa20.86■□□□□ 0.93
CHFR-218ENST00000540963 MYCBPQ99417 103 aaPredicted RBP20.86■□□□□ 0.93
CHFR-218ENST00000540963 DPCDQ9BVM2 203 aaPredicted RBP20.86■□□□□ 0.93
CHFR-218ENST00000540963 AMBNQ9NP70 447 aa20.86■□□□□ 0.93
CHFR-218ENST00000540963 ZNF137PP52743 207 aa20.85■□□□□ 0.93
CHFR-218ENST00000540963 CITED4Q96RK1 184 aa20.85■□□□□ 0.93
CHFR-218ENST00000540963 S100A14Q9HCY8 104 aa20.85■□□□□ 0.93
CHFR-218ENST00000540963 GFOD1Q9NXC2 390 aa20.85■□□□□ 0.93
CHFR-218ENST00000540963 VSIG4Q9Y279 399 aa20.85■□□□□ 0.93
CHFR-218ENST00000540963 C15orf65H3BRN8 121 aa20.84■□□□□ 0.93
CHFR-218ENST00000540963 SDCBPO00560 298 aaPredicted RBP20.84■□□□□ 0.93
CHFR-218ENST00000540963 ORC5O43913 435 aa20.84■□□□□ 0.93
CHFR-218ENST00000540963 ZSCAN26Q16670 478 aa20.84■□□□□ 0.93
CHFR-218ENST00000540963 NHLRC3Q5JS37 347 aa20.84■□□□□ 0.93
CHFR-218ENST00000540963 ASPHD1Q5U4P2 390 aa20.84■□□□□ 0.93
CHFR-218ENST00000540963 TMEM65Q6PI78 240 aa20.84■□□□□ 0.93
CHFR-218ENST00000540963 ASCL4Q6XD76 172 aa20.84■□□□□ 0.93
CHFR-218ENST00000540963 ZNF491Q8N8L2 437 aa20.84■□□□□ 0.93
CHFR-218ENST00000540963 APH1BQ8WW43 257 aa20.84■□□□□ 0.93
CHFR-218ENST00000540963 MRPL48Q96GC5 212 aaKnown RBP20.84■□□□□ 0.93
CHFR-218ENST00000540963 ORC6Q9Y5N6 252 aa20.84■□□□□ 0.93
CHFR-218ENST00000540963 GMPPBQ9Y5P6 360 aa20.84■□□□□ 0.93
CHFR-218ENST00000540963 TMEM30CPA0ZSE6 113 aa20.83■□□□□ 0.93
CHFR-218ENST00000540963 MAGEB3O15480 346 aa20.83■□□□□ 0.93
CHFR-218ENST00000540963 PPIFP30405 207 aaKnown RBP20.83■□□□□ 0.93
CHFR-218ENST00000540963 KIAA0141Q14154 515 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms