RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 NKAPLQ5M9Q1 402 aa17.95■□□□□ 0.46
TRIM65-202ENST00000540128 C6orf201Q7Z4U5 140 aa17.95■□□□□ 0.46
TRIM65-202ENST00000540128 LDLRAD3Q86YD5 345 aa17.95■□□□□ 0.46
TRIM65-202ENST00000540128 KIRREL1Q96J84 757 aa17.95■□□□□ 0.46
TRIM65-202ENST00000540128 CYYR1Q96J86 154 aa17.95■□□□□ 0.46
TRIM65-202ENST00000540128 FAAP24Q9BTP7 215 aa17.95■□□□□ 0.46
TRIM65-202ENST00000540128 CUBNO60494 3623 aa17.95■□□□□ 0.46
TRIM65-202ENST00000540128 IGHV2-26A0A0B4J1V2 119 aa17.94■□□□□ 0.46
TRIM65-202ENST00000540128 A0A0B4J203 849 aa17.94■□□□□ 0.46
TRIM65-202ENST00000540128 TRAV39A0A0B4J263 110 aa17.94■□□□□ 0.46
TRIM65-202ENST00000540128 SMIM30A4D0T7 59 aa17.94■□□□□ 0.46
TRIM65-202ENST00000540128 C15orf65H3BRN8 121 aa17.94■□□□□ 0.46
TRIM65-202ENST00000540128 TRIM77I1YAP6 450 aa17.94■□□□□ 0.46
TRIM65-202ENST00000540128 MELTFP08582 738 aa17.94■□□□□ 0.46
TRIM65-202ENST00000540128 FBP1P09467 338 aa17.94■□□□□ 0.46
TRIM65-202ENST00000540128 OMGP23515 440 aa17.94■□□□□ 0.46
TRIM65-202ENST00000540128 EFNB2P52799 333 aa17.94■□□□□ 0.46
TRIM65-202ENST00000540128 SLC9A3R2Q15599 337 aa17.94■□□□□ 0.46
TRIM65-202ENST00000540128 RTN4RL2Q86UN3 420 aa17.94■□□□□ 0.46
TRIM65-202ENST00000540128 TMEM86BQ8N661 226 aa17.94■□□□□ 0.46
TRIM65-202ENST00000540128 OR56B1Q8NGI3 324 aa17.94■□□□□ 0.46
TRIM65-202ENST00000540128 TMEM158Q8WZ71 300 aa17.94■□□□□ 0.46
TRIM65-202ENST00000540128 CLEC7AQ9BXN2 247 aa17.94■□□□□ 0.46
TRIM65-202ENST00000540128 MEGF9Q9H1U4 602 aa17.94■□□□□ 0.46
TRIM65-202ENST00000540128 ZMAT3Q9HA38 289 aaKnown RBP17.94■□□□□ 0.46
TRIM65-202ENST00000540128 MBNL3Q9NUK0 354 aaKnown RBP17.94■□□□□ 0.46
TRIM65-202ENST00000540128 PLEKHJ1Q9NW61 149 aa17.94■□□□□ 0.46
TRIM65-202ENST00000540128 TBL2Q9Y4P3 447 aaKnown RBP17.94■□□□□ 0.46
TRIM65-202ENST00000540128 DNAJC9-AS1A6NH13 148 aa17.93■□□□□ 0.46
TRIM65-202ENST00000540128 VEGFCP49767 419 aa17.93■□□□□ 0.46
TRIM65-202ENST00000540128 UBA52P62987 128 aaKnown RBP17.93■□□□□ 0.46
TRIM65-202ENST00000540128 BAIAP2L2Q6UXY1 529 aa17.93■□□□□ 0.46
TRIM65-202ENST00000540128 SLC16A12Q6ZSM3 486 aa17.93■□□□□ 0.46
TRIM65-202ENST00000540128 ZNF554Q86TJ5 538 aa17.93■□□□□ 0.46
TRIM65-202ENST00000540128 ABHD12Q8N2K0 398 aa17.93■□□□□ 0.46
TRIM65-202ENST00000540128 BEND2Q8NDZ0 799 aa17.93■□□□□ 0.46
TRIM65-202ENST00000540128 MRPL30Q8TCC3 161 aaKnown RBP17.93■□□□□ 0.46
TRIM65-202ENST00000540128 CCDC107Q8WV48 283 aa17.93■□□□□ 0.46
TRIM65-202ENST00000540128 C17orf50Q8WW18 174 aa17.93■□□□□ 0.46
TRIM65-202ENST00000540128 IDI2-AS1Q9NZ38 188 aa17.93■□□□□ 0.46
TRIM65-202ENST00000540128 DAPK2Q9UIK4 370 aa17.93■□□□□ 0.46
TRIM65-202ENST00000540128 NAPSAO96009 420 aa17.92■□□□□ 0.46
TRIM65-202ENST00000540128 ARG1P05089 322 aa17.92■□□□□ 0.46
TRIM65-202ENST00000540128 SSTR5P35346 364 aa17.92■□□□□ 0.46
TRIM65-202ENST00000540128 IER3P46695 156 aa17.92■□□□□ 0.46
TRIM65-202ENST00000540128 LGALS4P56470 323 aa17.92■□□□□ 0.46
TRIM65-202ENST00000540128 SCAND1P57086 179 aa17.92■□□□□ 0.46
TRIM65-202ENST00000540128 MXD1Q05195 221 aa17.92■□□□□ 0.46
TRIM65-202ENST00000540128 KRTAP24-1Q3LI83 254 aa17.92■□□□□ 0.46
TRIM65-202ENST00000540128 TRAT1Q6PIZ9 186 aa17.92■□□□□ 0.46
TRIM65-202ENST00000540128 ANKRD13BQ86YJ7 626 aa17.92■□□□□ 0.46
TRIM65-202ENST00000540128 OR52M1Q8NGK5 317 aa17.92■□□□□ 0.46
TRIM65-202ENST00000540128 OR4K15Q8NH41 348 aa17.92■□□□□ 0.46
TRIM65-202ENST00000540128 RFESDQ8TAC1 157 aa17.92■□□□□ 0.46
TRIM65-202ENST00000540128 FAM216AQ8WUB2 273 aa17.92■□□□□ 0.46
TRIM65-202ENST00000540128 SSMEM1Q8WWF3 244 aa17.92■□□□□ 0.46
TRIM65-202ENST00000540128 RIMS4Q9H426 269 aaPredicted RBP17.92■□□□□ 0.46
TRIM65-202ENST00000540128 ZNRD1Q9P1U0 126 aa17.92■□□□□ 0.46
TRIM65-202ENST00000540128 TRAPPC2LQ9UL33 140 aa17.92■□□□□ 0.46
TRIM65-202ENST00000540128 POMT1Q9Y6A1 747 aa17.92■□□□□ 0.46
TRIM65-202ENST00000540128 FBN1P35555 2871 aaKnown RBP17.92■□□□□ 0.46
TRIM65-202ENST00000540128 TRBV6-6A0A0A6YYG2 114 aa17.91■□□□□ 0.46
TRIM65-202ENST00000540128 RAB27BO00194 218 aa17.91■□□□□ 0.46
TRIM65-202ENST00000540128 IGLV1-47P01700 117 aa17.91■□□□□ 0.46
TRIM65-202ENST00000540128 TGFBR1P36897 503 aa17.91■□□□□ 0.46
TRIM65-202ENST00000540128 RPS19P39019 145 aaKnown RBP17.91■□□□□ 0.46
TRIM65-202ENST00000540128 AANATQ16613 207 aa17.91■□□□□ 0.46
TRIM65-202ENST00000540128 PLAC9Q5JTB6 97 aa17.91■□□□□ 0.46
TRIM65-202ENST00000540128 LDLRAD2Q5SZI1 272 aa17.91■□□□□ 0.46
TRIM65-202ENST00000540128 C6orf183Q5T699 404 aa17.91■□□□□ 0.46
TRIM65-202ENST00000540128 MINOS1Q5TGZ0 78 aa17.91■□□□□ 0.46
TRIM65-202ENST00000540128 Q6ZTK2 550 aa17.91■□□□□ 0.46
TRIM65-202ENST00000540128 CROCCP3Q8IVE0 287 aa17.91■□□□□ 0.46
TRIM65-202ENST00000540128 ARL11Q969Q4 196 aa17.91■□□□□ 0.46
TRIM65-202ENST00000540128 MALSU1Q96EH3 234 aa17.91■□□□□ 0.46
TRIM65-202ENST00000540128 MDFIQ99750 246 aa17.91■□□□□ 0.46
TRIM65-202ENST00000540128 MINOS1-NBL1R4GNA1 71 aa17.91■□□□□ 0.46
TRIM65-202ENST00000540128 METTL21EPA6NDL7 271 aa17.9■□□□□ 0.46
TRIM65-202ENST00000540128 POM121CA8CG34 1229 aa17.9■□□□□ 0.46
TRIM65-202ENST00000540128 C12orf77C9JDV5 145 aa17.9■□□□□ 0.46
TRIM65-202ENST00000540128 F2RL2O00254 374 aa17.9■□□□□ 0.46
TRIM65-202ENST00000540128 HOXA3O43365 443 aaPredicted RBP17.9■□□□□ 0.46
TRIM65-202ENST00000540128 PAHP00439 452 aa17.9■□□□□ 0.46
TRIM65-202ENST00000540128 RNASE1P07998 156 aaKnown RBP17.9■□□□□ 0.46
TRIM65-202ENST00000540128 RCC1P18754 421 aaPredicted RBP17.9■□□□□ 0.46
TRIM65-202ENST00000540128 LSM3P62310 102 aaKnown RBP17.9■□□□□ 0.46
TRIM65-202ENST00000540128 UTF1Q5T230 341 aa17.9■□□□□ 0.46
TRIM65-202ENST00000540128 LHFPL4Q7Z7J7 247 aa17.9■□□□□ 0.46
TRIM65-202ENST00000540128 ZNF596Q8TC21 504 aa17.9■□□□□ 0.46
TRIM65-202ENST00000540128 ARHGAP5-AS1Q96IT6 56 aa17.9■□□□□ 0.46
TRIM65-202ENST00000540128 PECRQ9BY49 303 aa17.9■□□□□ 0.46
TRIM65-202ENST00000540128 ZNF286AQ9HBT8 521 aa17.9■□□□□ 0.46
TRIM65-202ENST00000540128 RAB9BQ9NP90 201 aa17.9■□□□□ 0.46
TRIM65-202ENST00000540128 SNRPBP14678 240 aaKnown RBP17.89■□□□□ 0.45
TRIM65-202ENST00000540128 LOXL3P58215 753 aa17.89■□□□□ 0.45
TRIM65-202ENST00000540128 DYNC1I2Q13409 638 aaKnown RBP17.89■□□□□ 0.45
TRIM65-202ENST00000540128 TMEM30BQ3MIR4 351 aa17.89■□□□□ 0.45
TRIM65-202ENST00000540128 ZNF880Q6PDB4 577 aa17.89■□□□□ 0.45
TRIM65-202ENST00000540128 OR4P4Q8NGL7 312 aa17.89■□□□□ 0.45
TRIM65-202ENST00000540128 OR10R2Q8NGX6 335 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms