RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 SFT2D2O95562 160 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 DIRAS3O95661 229 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 PPYP01298 95 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 PSG2P11465 335 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 RPS2P15880 293 aaKnown RBP8.1□□□□□ -1.11
MDH1-215ENST00000539945 RCC1P18754 421 aaPredicted RBP8.1□□□□□ -1.11
MDH1-215ENST00000539945 TNFRSF1AP19438 455 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 PI3P19957 117 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 AADACP22760 399 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 VAMP1P23763 118 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 CD34P28906 385 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 APOBEC3AP31941 199 aaPredicted RBP8.1□□□□□ -1.11
MDH1-215ENST00000539945 CEBPDP49716 269 aaPredicted RBP8.1□□□□□ -1.11
MDH1-215ENST00000539945 H2BFSP57053 126 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 SEC61A1P61619 476 aaKnown RBP8.1□□□□□ -1.11
MDH1-215ENST00000539945 SUPT4H1P63272 117 aaKnown RBP8.1□□□□□ -1.11
MDH1-215ENST00000539945 HLA-DRB3P79483 266 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 HOXA4Q00056 320 aaPredicted RBP8.1□□□□□ -1.11
MDH1-215ENST00000539945 SNTB1Q13884 538 aaKnown RBP8.1□□□□□ -1.11
MDH1-215ENST00000539945 HERPUD1Q15011 391 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 TESK1Q15569 626 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 EFNB3Q15768 340 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 C2orf68Q2NKX9 166 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 FAM209AQ5JX71 171 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 LPCAT3Q6P1A2 487 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 ZNF808Q8N4W9 903 aaPredicted RBP8.1□□□□□ -1.11
MDH1-215ENST00000539945 CD177Q8N6Q3 437 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 UXS1Q8NBZ7 420 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 OR2T35Q8NGX2 323 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 FAM222BQ8WU58 562 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 CABLES2Q9BTV7 478 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 TMPRSS13Q9BYE2 586 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 FXYD6Q9H0Q3 95 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 CLEC4MQ9H2X3 399 aaPredicted RBP8.1□□□□□ -1.11
MDH1-215ENST00000539945 RNF7Q9UBF6 113 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 SHPKQ9UHJ6 478 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 RNF115Q9Y4L5 304 aa8.1□□□□□ -1.11
MDH1-215ENST00000539945 IGKV1D-17A0A075B6S4 117 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 TRBV6-7A0A0A0MS04 114 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 FAM172BPA6NC97 362 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 DBX1A6NMT0 343 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 GOSR2O14653 212 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 BET1O15155 118 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 ZNF737O75373 536 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 ZNF205O95201 554 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 AGAP20933 346 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 NFYAP23511 347 aaPredicted RBP8.09□□□□□ -1.11
MDH1-215ENST00000539945 OR3A1P47881 315 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 HERV-K104P61576 105 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 COL10A1Q03692 680 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 TLE1Q04724 770 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 SRSF4Q08170 494 aaKnown RBP8.09□□□□□ -1.11
MDH1-215ENST00000539945 ATXN7L3Q14CW9 347 aaPredicted RBP8.09□□□□□ -1.11
MDH1-215ENST00000539945 LY6G6FQ5SQ64 297 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 CLEC18BQ6UXF7 455 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 SGPP2Q8IWX5 399 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 SLC38A6Q8IZM9 456 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 OR5M8Q8NGP6 311 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 OR11L1Q8NGX0 322 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 LILRB1Q8NHL6 650 aaPredicted RBP8.09□□□□□ -1.11
MDH1-215ENST00000539945 PIK3IP1Q96FE7 263 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 RSRP1Q9BUV0 290 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 CHIAQ9BZP6 476 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 SHARPINQ9H0F6 387 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 DNAJB11Q9UBS4 358 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 OPN4Q9UHM6 478 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 TRAPPC2LQ9UL33 140 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 PPP1R3CQ9UQK1 317 aa8.09□□□□□ -1.11
MDH1-215ENST00000539945 ANKHD1Q8IWZ3 2542 aaKnown RBP8.09□□□□□ -1.11
MDH1-215ENST00000539945 ICE1Q9Y2F5 2266 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 CRYM-AS1A6NIL9 109 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 DEFB108AA8MXU0 73 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 B9A039 149 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 G3V3Q6 166 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 RGS11O94810 467 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 SIX6O95475 246 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 GNLYP22749 145 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 DNASE1P24855 282 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 LOXP28300 417 aaPredicted RBP8.08□□□□□ -1.12
MDH1-215ENST00000539945 PIGPP57054 158 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 FXYD4P59646 89 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 HMGN3Q15651 99 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 MST1LQ2TV78 715 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 DCAF12L2Q5VW00 463 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 LIN54Q6MZP7 749 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 C11orf88Q6PI97 169 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 C5orf24Q7Z6I8 188 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 H1FOOQ8IZA3 346 aaPredicted RBP8.08□□□□□ -1.12
MDH1-215ENST00000539945 BOLLQ8N9W6 283 aaKnown RBP8.08□□□□□ -1.12
MDH1-215ENST00000539945 OR11H4Q8NGC9 324 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 OR5T2Q8NGG2 359 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 OR10J5Q8NHC4 309 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 COQ8AQ8NI60 647 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 CASTOR1Q8WTX7 329 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 NEUROG1Q92886 237 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 TOMM40LQ969M1 308 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 COQ2Q96H96 371 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 KIRREL1Q96J84 757 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 SNX22Q96L94 193 aa8.08□□□□□ -1.12
MDH1-215ENST00000539945 TMEM204Q9BSN7 226 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 163.7 ms