RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 DUX4L5P0CJ88 424 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 DUX4L6P0CJ89 424 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 DUX4L7P0CJ90 424 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 SELLP14151 372 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 NDUFB7P17568 137 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 KCNJ3P48549 501 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 RBM39Q14498 530 aaKnown RBP12.82□□□□□ -0.36
DDB1-216ENST00000539739 UBE2NLQ5JXB2 153 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 WDR25Q64LD2 544 aaPredicted RBP12.82□□□□□ -0.36
DDB1-216ENST00000539739 RAB12Q6IQ22 244 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 DUX4L9Q6RFH8 374 aaPredicted RBP12.82□□□□□ -0.36
DDB1-216ENST00000539739 METAP1DQ6UB28 335 aaPredicted RBP12.82□□□□□ -0.36
DDB1-216ENST00000539739 ZNF841Q6ZN19 808 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 C17orf107Q6ZR85 190 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 NRARPQ7Z6K4 114 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 OR8H2Q8N162 312 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 SUMF2Q8NBJ7 301 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 RAB40AQ8WXH6 277 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 DPCDQ9BVM2 203 aaPredicted RBP12.82□□□□□ -0.36
DDB1-216ENST00000539739 SAV1Q9H4B6 383 aaPredicted RBP12.82□□□□□ -0.36
DDB1-216ENST00000539739 RANBP3Q9H6Z4 567 aaPredicted RBP12.82□□□□□ -0.36
DDB1-216ENST00000539739 PLEKHJ1Q9NW61 149 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 MCUBQ9NWR8 336 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 DUX4Q9UBX2 424 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 UBQLN2Q9UHD9 624 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 ADAM30Q9UKF2 790 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 TBC1D24Q9ULP9 559 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 HSPB11Q9Y547 144 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 CREBBPQ92793 2442 aa12.81□□□□□ -0.36
DDB1-216ENST00000539739 A0A0A6YYD4 124 aa12.81□□□□□ -0.36
DDB1-216ENST00000539739 TRAV20A0A0B4J274 112 aa12.81□□□□□ -0.36
DDB1-216ENST00000539739 HSPB6O14558 160 aa12.81□□□□□ -0.36
DDB1-216ENST00000539739 MGST3O14880 152 aa12.81□□□□□ -0.36
DDB1-216ENST00000539739 FOXH1O75593 365 aa12.81□□□□□ -0.36
DDB1-216ENST00000539739 GLAP06280 429 aa12.81□□□□□ -0.36
DDB1-216ENST00000539739 C4BPBP20851 252 aa12.81□□□□□ -0.36
DDB1-216ENST00000539739 IL2RGP31785 369 aa12.81□□□□□ -0.36
DDB1-216ENST00000539739 BTN1A1Q13410 526 aa12.81□□□□□ -0.36
DDB1-216ENST00000539739 NKAPLQ5M9Q1 402 aa12.81□□□□□ -0.36
DDB1-216ENST00000539739 LAMTOR1Q6IAA8 161 aa12.81□□□□□ -0.36
DDB1-216ENST00000539739 Q6ZTK2 550 aa12.81□□□□□ -0.36
DDB1-216ENST00000539739 NEK7Q8TDX7 302 aa12.81□□□□□ -0.36
DDB1-216ENST00000539739 S100A16Q96FQ6 103 aaKnown RBP12.81□□□□□ -0.36
DDB1-216ENST00000539739 FYTTD1Q96QD9 318 aaKnown RBP12.81□□□□□ -0.36
DDB1-216ENST00000539739 CHST6Q9GZX3 395 aa12.81□□□□□ -0.36
DDB1-216ENST00000539739 ABCG5Q9H222 651 aa12.81□□□□□ -0.36
DDB1-216ENST00000539739 RCC2Q9P258 522 aaKnown RBP12.81□□□□□ -0.36
DDB1-216ENST00000539739 RPS10-NUDT3A0A1W2PQS6 291 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 LINC00587B1AMM8 73 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 H7C1Q1 480 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 SOCS1O15524 211 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 OR3A1P47881 315 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 SEC61A1P61619 476 aaKnown RBP12.8□□□□□ -0.36
DDB1-216ENST00000539739 CD276Q5ZPR3 534 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 C9orf62Q8N4C0 152 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 BPIFB2Q8N4F0 458 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 MAPK1IP1LQ8NDC0 245 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 OR4S1Q8NGB4 309 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 OR10R2Q8NGX6 335 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 SLC25A38Q96DW6 304 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 RAB3CQ96E17 227 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 TMEM68Q96MH6 324 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 ZNF581Q9P0T4 197 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 A0A0A6YYH2 397 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 A6NJ64 397 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 CYSRT1A8MQ03 144 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 PHF1O43189 567 aaPredicted RBP12.8□□□□□ -0.36
DDB1-216ENST00000539739 CSN2P05814 226 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 CHATP28329 748 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 ARL6IP1Q15041 203 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 BRICD5Q6PL45 260 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 SPNS3Q6ZMD2 512 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 CMTM4Q8IZR5 234 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 H1FXQ92522 213 aaKnown RBP12.8□□□□□ -0.36
DDB1-216ENST00000539739 TCEAL7Q9BRU2 100 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 SLC23A1Q9UHI7 598 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 PFDN2Q9UHV9 154 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 HSF4Q9ULV5 492 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 MED13LQ71F56 2210 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 MALRD1Q5VYJ5 2156 aa12.8□□□□□ -0.36
DDB1-216ENST00000539739 A8MXK9 166 aa12.79□□□□□ -0.36
DDB1-216ENST00000539739 B4DSR2 109 aa12.79□□□□□ -0.36
DDB1-216ENST00000539739 RAB27BO00194 218 aa12.79□□□□□ -0.36
DDB1-216ENST00000539739 SMAD7O15105 426 aaKnown RBP12.79□□□□□ -0.36
DDB1-216ENST00000539739 HPGDSO60760 199 aa12.79□□□□□ -0.36
DDB1-216ENST00000539739 RFX2P48378 723 aa12.79□□□□□ -0.36
DDB1-216ENST00000539739 EDDM3BP56851 147 aa12.79□□□□□ -0.36
DDB1-216ENST00000539739 EDDM3AQ14507 147 aa12.79□□□□□ -0.36
DDB1-216ENST00000539739 ATXN7L3Q14CW9 347 aaPredicted RBP12.79□□□□□ -0.36
DDB1-216ENST00000539739 TMEM249Q2WGJ8 235 aa12.79□□□□□ -0.36
DDB1-216ENST00000539739 C6orf201Q7Z4U5 140 aa12.79□□□□□ -0.36
DDB1-216ENST00000539739 OR8H3Q8N146 312 aa12.79□□□□□ -0.36
DDB1-216ENST00000539739 WDFY2Q96P53 400 aa12.79□□□□□ -0.36
DDB1-216ENST00000539739 NUDT16L1Q9BRJ7 211 aaKnown RBP12.79□□□□□ -0.36
DDB1-216ENST00000539739 ITPR3Q14573 2671 aa12.79□□□□□ -0.36
DDB1-216ENST00000539739 LOC105371242A0A075B767 164 aa12.78□□□□□ -0.36
DDB1-216ENST00000539739 UBE2QL1A1L167 161 aa12.78□□□□□ -0.36
DDB1-216ENST00000539739 FOXI3A8MTJ6 420 aaPredicted RBP12.78□□□□□ -0.36
DDB1-216ENST00000539739 FAM157AC9JC47 383 aa12.78□□□□□ -0.36
DDB1-216ENST00000539739 H7C2Y5 167 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms