RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 CABLES2Q9BTV7 478 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 CCL28Q9NRJ3 127 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 TAAR3PQ9P1P4 343 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 TRBV24-1A0A075B6N3 115 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 IGKV1D-13A0A0B4J2D9 117 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 G3V3Y1 287 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 DEGS1O15121 323 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 HIST1H2BKO60814 126 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 YIF1AO95070 293 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 PTBP3O95758 552 aaKnown RBP11.35□□□□□ -0.59
UBE3B-209ENST00000539584 IFNA1P01562 189 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 OPN1MWP04001 364 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 HIST1H2BJP06899 126 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 CXCL1P09341 107 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 OPN1MW2P0DN77 364 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 OPN1MW3P0DN78 364 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 IGKV1-13P0DP09 117 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 BCL2P10415 239 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 HIST1H2BOP23527 126 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 HIST1H2BBP33778 126 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 HIST1H2BDP58876 126 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 ERVFRD-1P60508 538 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 RPS18P62269 152 aaKnown RBP11.35□□□□□ -0.59
UBE3B-209ENST00000539584 HIST1H2BCP62807 126 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 HBG1P69891 147 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 HBG2P69892 147 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 ZNF154Q13106 437 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 PDCD1Q15116 288 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 HIST2H2BEQ16778 126 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 PYY3Q5JQD4 70 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 OR2B11Q5JQS5 317 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.35□□□□□ -0.59
UBE3B-209ENST00000539584 MRPL21Q7Z2W9 205 aaKnown RBP11.35□□□□□ -0.59
UBE3B-209ENST00000539584 OR56B2PQ8NGI1 322 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 FGFBP3Q8TAT2 258 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 HIST1H2BHQ93079 126 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 HIST1H2BNQ99877 126 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 HIST1H2BMQ99879 126 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 SPTBN5Q9NRC6 3674 aaKnown RBP11.35□□□□□ -0.59
UBE3B-209ENST00000539584 KIAA1549Q9HCM3 1950 aa11.34□□□□□ -0.59
UBE3B-209ENST00000539584 ZNF727A8MUV8 499 aa11.34□□□□□ -0.59
UBE3B-209ENST00000539584 CYB5BO43169 146 aa11.34□□□□□ -0.59
UBE3B-209ENST00000539584 EPHA1P21709 976 aa11.34□□□□□ -0.59
UBE3B-209ENST00000539584 TCEAL6Q6IPX3 200 aa11.34□□□□□ -0.59
UBE3B-209ENST00000539584 PCSK4Q6UW60 755 aa11.34□□□□□ -0.59
UBE3B-209ENST00000539584 MRGPRGQ86SM5 289 aa11.34□□□□□ -0.59
UBE3B-209ENST00000539584 THNSL2Q86YJ6 484 aa11.34□□□□□ -0.59
UBE3B-209ENST00000539584 CPEB3Q8NE35 698 aaKnown RBP11.34□□□□□ -0.59
UBE3B-209ENST00000539584 OR10J5Q8NHC4 309 aa11.34□□□□□ -0.59
UBE3B-209ENST00000539584 IFI44Q8TCB0 444 aa11.34□□□□□ -0.59
UBE3B-209ENST00000539584 NEK7Q8TDX7 302 aa11.34□□□□□ -0.59
UBE3B-209ENST00000539584 RCC1LQ96I51 464 aaKnown RBP11.34□□□□□ -0.59
UBE3B-209ENST00000539584 FAM210BQ96KR6 192 aa11.34□□□□□ -0.59
UBE3B-209ENST00000539584 PFDN5Q99471 154 aa11.34□□□□□ -0.59
UBE3B-209ENST00000539584 ASCC3Q8N3C0 2202 aaKnown RBP11.34□□□□□ -0.59
UBE3B-209ENST00000539584 BRWD1Q9NSI6 2320 aa11.34□□□□□ -0.59
UBE3B-209ENST00000539584 KIAA1324LA8MWY0 1029 aaPredicted RBP11.33□□□□□ -0.6
UBE3B-209ENST00000539584 MRPL33O75394 65 aaKnown RBP11.33□□□□□ -0.6
UBE3B-209ENST00000539584 HIST1H1BP16401 226 aaKnown RBP11.33□□□□□ -0.6
UBE3B-209ENST00000539584 APLNRP35414 380 aa11.33□□□□□ -0.6
UBE3B-209ENST00000539584 DUSP3P51452 185 aaPredicted RBP11.33□□□□□ -0.6
UBE3B-209ENST00000539584 CEBPGP53567 150 aa11.33□□□□□ -0.6
UBE3B-209ENST00000539584 RUNX1Q01196 453 aa11.33□□□□□ -0.6
UBE3B-209ENST00000539584 ZNF324BQ6AW86 544 aaPredicted RBP11.33□□□□□ -0.6
UBE3B-209ENST00000539584 MOB1BQ7L9L4 216 aa11.33□□□□□ -0.6
UBE3B-209ENST00000539584 ZNF573Q86YE8 665 aa11.33□□□□□ -0.6
UBE3B-209ENST00000539584 PSMF1Q92530 271 aa11.33□□□□□ -0.6
UBE3B-209ENST00000539584 SHANK1Q9Y566 2161 aa11.33□□□□□ -0.6
UBE3B-209ENST00000539584 ARID1AO14497 2285 aa11.33□□□□□ -0.6
UBE3B-209ENST00000539584 IGKV1-6A0A0C4DH72 117 aa11.33□□□□□ -0.6
UBE3B-209ENST00000539584 CCDC163A0A0D9SF12 145 aa11.33□□□□□ -0.6
UBE3B-209ENST00000539584 OR5B21A6NL26 309 aa11.33□□□□□ -0.6
UBE3B-209ENST00000539584 IFITM10A6NMD0 228 aa11.33□□□□□ -0.6
UBE3B-209ENST00000539584 FAM90A26D6RGX4 464 aa11.33□□□□□ -0.6
UBE3B-209ENST00000539584 SS18L1O75177 396 aaPredicted RBP11.33□□□□□ -0.6
UBE3B-209ENST00000539584 MDH2P40926 338 aaKnown RBP11.33□□□□□ -0.6
UBE3B-209ENST00000539584 PRSS12P56730 875 aa11.33□□□□□ -0.6
UBE3B-209ENST00000539584 FAM90A2PQ658T7 463 aa11.33□□□□□ -0.6
UBE3B-209ENST00000539584 ZNF787Q6DD87 383 aa11.33□□□□□ -0.6
UBE3B-209ENST00000539584 MRPL30Q8TCC3 161 aaKnown RBP11.33□□□□□ -0.6
UBE3B-209ENST00000539584 GPR146Q96CH1 333 aa11.33□□□□□ -0.6
UBE3B-209ENST00000539584 CALHM2Q9HA72 323 aa11.33□□□□□ -0.6
UBE3B-209ENST00000539584 GFOD1Q9NXC2 390 aa11.33□□□□□ -0.6
UBE3B-209ENST00000539584 MTCH1Q9NZJ7 389 aa11.33□□□□□ -0.6
UBE3B-209ENST00000539584 VAX2Q9UIW0 290 aa11.33□□□□□ -0.6
UBE3B-209ENST00000539584 MPC1Q9Y5U8 109 aa11.33□□□□□ -0.6
UBE3B-209ENST00000539584 RANBP2P49792 3224 aaKnown RBP11.32□□□□□ -0.6
UBE3B-209ENST00000539584 LRRC3CA6NJW4 275 aa11.32□□□□□ -0.6
UBE3B-209ENST00000539584 NTN3O00634 580 aaPredicted RBP11.32□□□□□ -0.6
UBE3B-209ENST00000539584 SYNGR2O43760 224 aa11.32□□□□□ -0.6
UBE3B-209ENST00000539584 ARR3P36575 388 aa11.32□□□□□ -0.6
UBE3B-209ENST00000539584 GPM6AP51674 278 aa11.32□□□□□ -0.6
UBE3B-209ENST00000539584 GFRA1P56159 465 aa11.32□□□□□ -0.6
UBE3B-209ENST00000539584 ZFP36L1Q07352 338 aaKnown RBP11.32□□□□□ -0.6
UBE3B-209ENST00000539584 HLA-BQ31612 363 aa11.32□□□□□ -0.6
UBE3B-209ENST00000539584 ZNF468Q5VIY5 522 aaPredicted RBP11.32□□□□□ -0.6
UBE3B-209ENST00000539584 ZNF343Q6P1L6 599 aa11.32□□□□□ -0.6
UBE3B-209ENST00000539584 HIST3H2BBQ8N257 126 aa11.32□□□□□ -0.6
UBE3B-209ENST00000539584 AGMATQ9BSE5 352 aa11.32□□□□□ -0.6
UBE3B-209ENST00000539584 IER2Q9BTL4 223 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms