RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 ATAD3CQ5T2N8 411 aa17.68■□□□□ 0.42
SCARB1-206ENST00000539320 SLC16A12Q6ZSM3 486 aa17.68■□□□□ 0.42
SCARB1-206ENST00000539320 THNSL2Q86YJ6 484 aa17.68■□□□□ 0.42
SCARB1-206ENST00000539320 OR8H3Q8N146 312 aa17.68■□□□□ 0.42
SCARB1-206ENST00000539320 DRAM1Q8N682 238 aa17.68■□□□□ 0.42
SCARB1-206ENST00000539320 OR4X2Q8NGF9 303 aa17.68■□□□□ 0.42
SCARB1-206ENST00000539320 OR10X1Q8NGY0 326 aa17.68■□□□□ 0.42
SCARB1-206ENST00000539320 CNOT2Q9NZN8 540 aaKnown RBP17.68■□□□□ 0.42
SCARB1-206ENST00000539320 TRBV5-7A0A0A0MS05 114 aa17.67■□□□□ 0.42
SCARB1-206ENST00000539320 GTF2F2P13984 249 aa17.67■□□□□ 0.42
SCARB1-206ENST00000539320 CAPGP40121 348 aa17.67■□□□□ 0.42
SCARB1-206ENST00000539320 C8orf59Q8N0T1 100 aaPredicted RBP17.67■□□□□ 0.42
SCARB1-206ENST00000539320 NEK7Q8TDX7 302 aa17.67■□□□□ 0.42
SCARB1-206ENST00000539320 OR14A2Q96R54 314 aa17.67■□□□□ 0.42
SCARB1-206ENST00000539320 PNMA8CA0A1B0GUJ8 204 aa17.66■□□□□ 0.42
SCARB1-206ENST00000539320 TCRBV4S1A1TA0A5B7 111 aa17.66■□□□□ 0.42
SCARB1-206ENST00000539320 PF4V1P10720 104 aa17.66■□□□□ 0.42
SCARB1-206ENST00000539320 DIAPH2-AS1Q14236 149 aa17.66■□□□□ 0.42
SCARB1-206ENST00000539320 GPR176Q14439 515 aa17.66■□□□□ 0.42
SCARB1-206ENST00000539320 HES1Q14469 280 aa17.66■□□□□ 0.42
SCARB1-206ENST00000539320 OXLD1Q5BKU9 147 aa17.66■□□□□ 0.42
SCARB1-206ENST00000539320 TCTEX1D4Q5JR98 221 aa17.66■□□□□ 0.42
SCARB1-206ENST00000539320 JAGN1Q8N5M9 183 aa17.66■□□□□ 0.42
SCARB1-206ENST00000539320 MYDGFQ969H8 173 aa17.66■□□□□ 0.42
SCARB1-206ENST00000539320 MUL1Q969V5 352 aa17.66■□□□□ 0.42
SCARB1-206ENST00000539320 MRPS28Q9Y2Q9 187 aaKnown RBP17.66■□□□□ 0.42
SCARB1-206ENST00000539320 TSSC4Q9Y5U2 329 aaPredicted RBP17.66■□□□□ 0.42
SCARB1-206ENST00000539320 C15orf65H3BRN8 121 aa17.65■□□□□ 0.42
SCARB1-206ENST00000539320 HSD17B6O14756 317 aa17.65■□□□□ 0.42
SCARB1-206ENST00000539320 MYL12BO14950 172 aa17.65■□□□□ 0.42
SCARB1-206ENST00000539320 PRB2P02812 416 aaPredicted RBP17.65■□□□□ 0.42
SCARB1-206ENST00000539320 GNAO1P09471 354 aa17.65■□□□□ 0.42
SCARB1-206ENST00000539320 TMEM11P17152 192 aa17.65■□□□□ 0.42
SCARB1-206ENST00000539320 GZMHP20718 246 aa17.65■□□□□ 0.42
SCARB1-206ENST00000539320 AHSA2Q719I0 299 aa17.65■□□□□ 0.42
SCARB1-206ENST00000539320 REC114Q7Z4M0 266 aa17.65■□□□□ 0.42
SCARB1-206ENST00000539320 ARL11Q969Q4 196 aa17.65■□□□□ 0.42
SCARB1-206ENST00000539320 SPACA1Q9HBV2 294 aa17.65■□□□□ 0.42
SCARB1-206ENST00000539320 RCC2Q9P258 522 aaKnown RBP17.65■□□□□ 0.42
SCARB1-206ENST00000539320 DNAH3Q8TD57 4116 aa17.65■□□□□ 0.42
SCARB1-206ENST00000539320 A0A1W2PPE3 182 aa17.64■□□□□ 0.41
SCARB1-206ENST00000539320 A0A1W2PPK0 400 aa17.64■□□□□ 0.41
SCARB1-206ENST00000539320 KHDC1LQ5JSQ8 128 aa17.64■□□□□ 0.41
SCARB1-206ENST00000539320 OGFRL1Q5TC84 451 aaPredicted RBP17.64■□□□□ 0.41
SCARB1-206ENST00000539320 AWAT2Q6E213 333 aa17.64■□□□□ 0.41
SCARB1-206ENST00000539320 LAIR2Q6ISS4 152 aa17.64■□□□□ 0.41
SCARB1-206ENST00000539320 C10orf99Q6UWK7 81 aa17.64■□□□□ 0.41
SCARB1-206ENST00000539320 GLIPR1L1Q6UWM5 242 aa17.64■□□□□ 0.41
SCARB1-206ENST00000539320 ZNF497Q6ZNH5 498 aa17.64■□□□□ 0.41
SCARB1-206ENST00000539320 STX19Q8N4C7 294 aa17.64■□□□□ 0.41
SCARB1-206ENST00000539320 OR52M1Q8NGK5 317 aa17.64■□□□□ 0.41
SCARB1-206ENST00000539320 UBALD1Q8TB05 177 aa17.64■□□□□ 0.41
SCARB1-206ENST00000539320 CCDC107Q8WV48 283 aa17.64■□□□□ 0.41
SCARB1-206ENST00000539320 DERL3Q96Q80 235 aa17.64■□□□□ 0.41
SCARB1-206ENST00000539320 PSORS1C1Q9UIG5 152 aa17.64■□□□□ 0.41
SCARB1-206ENST00000539320 AIPO00170 330 aa17.63■□□□□ 0.41
SCARB1-206ENST00000539320 SDCBPO00560 298 aaPredicted RBP17.63■□□□□ 0.41
SCARB1-206ENST00000539320 FGF16O43320 207 aa17.63■□□□□ 0.41
SCARB1-206ENST00000539320 PF4P02776 101 aa17.63■□□□□ 0.41
SCARB1-206ENST00000539320 CD33P20138 364 aa17.63■□□□□ 0.41
SCARB1-206ENST00000539320 WNT4P56705 351 aa17.63■□□□□ 0.41
SCARB1-206ENST00000539320 ZNF816Q0VGE8 651 aaPredicted RBP17.63■□□□□ 0.41
SCARB1-206ENST00000539320 C5orf56Q8N8D9 126 aa17.63■□□□□ 0.41
SCARB1-206ENST00000539320 FBLIM1Q8WUP2 373 aa17.63■□□□□ 0.41
SCARB1-206ENST00000539320 PHF21AQ96BD5 680 aa17.63■□□□□ 0.41
SCARB1-206ENST00000539320 MRPS24Q96EL2 167 aaKnown RBP17.63■□□□□ 0.41
SCARB1-206ENST00000539320 GFOD1Q9NXC2 390 aa17.63■□□□□ 0.41
SCARB1-206ENST00000539320 CCRL2O00421 344 aa17.62■□□□□ 0.41
SCARB1-206ENST00000539320 CASQ2O14958 399 aaPredicted RBP17.62■□□□□ 0.41
SCARB1-206ENST00000539320 ORC5O43913 435 aa17.62■□□□□ 0.41
SCARB1-206ENST00000539320 IGKV1D-33P01593 117 aa17.62■□□□□ 0.41
SCARB1-206ENST00000539320 IGKV1-33P01594 117 aa17.62■□□□□ 0.41
SCARB1-206ENST00000539320 MT-ND4P03905 459 aa17.62■□□□□ 0.41
SCARB1-206ENST00000539320 MAS1P04201 325 aa17.62■□□□□ 0.41
SCARB1-206ENST00000539320 CD1AP06126 327 aa17.62■□□□□ 0.41
SCARB1-206ENST00000539320 CELP19835 753 aa17.62■□□□□ 0.41
SCARB1-206ENST00000539320 CDH26Q8IXH8 852 aa17.62■□□□□ 0.41
SCARB1-206ENST00000539320 LINC00311Q8N616 119 aa17.62■□□□□ 0.41
SCARB1-206ENST00000539320 THRSPQ92748 146 aa17.62■□□□□ 0.41
SCARB1-206ENST00000539320 PLCXD1Q9NUJ7 323 aa17.62■□□□□ 0.41
SCARB1-206ENST00000539320 NECAP2Q9NVZ3 263 aa17.62■□□□□ 0.41
SCARB1-206ENST00000539320 PSMB11A5LHX3 300 aa17.61■□□□□ 0.41
SCARB1-206ENST00000539320 MCRIP1C9JLW8 97 aa17.61■□□□□ 0.41
SCARB1-206ENST00000539320 REG1BP48304 166 aa17.61■□□□□ 0.41
SCARB1-206ENST00000539320 DOC2BQ14184 412 aa17.61■□□□□ 0.41
SCARB1-206ENST00000539320 HNF4GQ14541 408 aa17.61■□□□□ 0.41
SCARB1-206ENST00000539320 NKAIN3Q8N8D7 197 aa17.61■□□□□ 0.41
SCARB1-206ENST00000539320 C8orf31Q8N9H6 132 aa17.61■□□□□ 0.41
SCARB1-206ENST00000539320 BPIFB6Q8NFQ5 453 aa17.61■□□□□ 0.41
SCARB1-206ENST00000539320 SGCDQ92629 289 aa17.61■□□□□ 0.41
SCARB1-206ENST00000539320 ETAA1Q9NY74 926 aa17.61■□□□□ 0.41
SCARB1-206ENST00000539320 IGHV3-43A0A0B4J1X8 118 aa17.6■□□□□ 0.41
SCARB1-206ENST00000539320 IGHV1-3A0A0C4DH29 117 aa17.6■□□□□ 0.41
SCARB1-206ENST00000539320 PIN1P1O15428 100 aa17.6■□□□□ 0.41
SCARB1-206ENST00000539320 GAPDHP04406 335 aaKnown RBP17.6■□□□□ 0.41
SCARB1-206ENST00000539320 IGHV3-43DP0DP04 118 aa17.6■□□□□ 0.41
SCARB1-206ENST00000539320 IL3RAP26951 378 aa17.6■□□□□ 0.41
SCARB1-206ENST00000539320 MAPK3P27361 379 aaPredicted RBP17.6■□□□□ 0.41
SCARB1-206ENST00000539320 LOXL3P58215 753 aa17.6■□□□□ 0.41
SCARB1-206ENST00000539320 TMEM30BQ3MIR4 351 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms