RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 CST11Q9H112 138 aa11.06□□□□□ -0.64
CD9-208ENST00000538834 LPAR5Q9H1C0 372 aa11.06□□□□□ -0.64
CD9-208ENST00000538834 AK6Q9Y3D8 172 aaKnown RBP11.06□□□□□ -0.64
CD9-208ENST00000538834 A0A1B0GUS0 222 aa11.05□□□□□ -0.64
CD9-208ENST00000538834 TMEM30CPA0ZSE6 113 aa11.05□□□□□ -0.64
CD9-208ENST00000538834 H3BUI4 141 aa11.05□□□□□ -0.64
CD9-208ENST00000538834 H3BUX3 64 aa11.05□□□□□ -0.64
CD9-208ENST00000538834 F2RL2O00254 374 aa11.05□□□□□ -0.64
CD9-208ENST00000538834 PDCD6O75340 191 aa11.05□□□□□ -0.64
CD9-208ENST00000538834 CRTAPO75718 401 aaPredicted RBP11.05□□□□□ -0.64
CD9-208ENST00000538834 CALRP27797 417 aaKnown RBP11.05□□□□□ -0.64
CD9-208ENST00000538834 RBM39Q14498 530 aaKnown RBP11.05□□□□□ -0.64
CD9-208ENST00000538834 HLA-DRB5Q30154 266 aa11.05□□□□□ -0.64
CD9-208ENST00000538834 RAB12Q6IQ22 244 aa11.05□□□□□ -0.64
CD9-208ENST00000538834 ZNF880Q6PDB4 577 aa11.05□□□□□ -0.64
CD9-208ENST00000538834 CCBE1Q6UXH8 406 aaPredicted RBP11.05□□□□□ -0.64
CD9-208ENST00000538834 C12orf54Q6X4T0 127 aa11.05□□□□□ -0.64
CD9-208ENST00000538834 Q6ZPA2 131 aa11.05□□□□□ -0.64
CD9-208ENST00000538834 Q6ZSV7 163 aa11.05□□□□□ -0.64
CD9-208ENST00000538834 TRAPPC6BQ86SZ2 158 aa11.05□□□□□ -0.64
CD9-208ENST00000538834 C8orf31Q8N9H6 132 aa11.05□□□□□ -0.64
CD9-208ENST00000538834 SLITRK2Q9H156 845 aa11.05□□□□□ -0.64
CD9-208ENST00000538834 IDI2-AS1Q9NZ38 188 aa11.05□□□□□ -0.64
CD9-208ENST00000538834 V9GY05 133 aa11.05□□□□□ -0.64
CD9-208ENST00000538834 VWFP04275 2813 aa11.05□□□□□ -0.64
CD9-208ENST00000538834 TRAV39A0A0B4J263 110 aa11.04□□□□□ -0.64
CD9-208ENST00000538834 A6NDX4 124 aa11.04□□□□□ -0.64
CD9-208ENST00000538834 MCRIP1C9JLW8 97 aa11.04□□□□□ -0.64
CD9-208ENST00000538834 BUB1B-PAK6H3BSN5 160 aa11.04□□□□□ -0.64
CD9-208ENST00000538834 PAHP00439 452 aa11.04□□□□□ -0.64
CD9-208ENST00000538834 MDKP21741 143 aaPredicted RBP11.04□□□□□ -0.64
CD9-208ENST00000538834 HTR1DP28221 377 aa11.04□□□□□ -0.64
CD9-208ENST00000538834 SSTR5P35346 364 aa11.04□□□□□ -0.64
CD9-208ENST00000538834 PSMD7P51665 324 aa11.04□□□□□ -0.64
CD9-208ENST00000538834 LGALS4P56470 323 aa11.04□□□□□ -0.64
CD9-208ENST00000538834 TMEM50BP56557 158 aa11.04□□□□□ -0.64
CD9-208ENST00000538834 Q3ZCU0 254 aa11.04□□□□□ -0.64
CD9-208ENST00000538834 ATAD3CQ5T2N8 411 aa11.04□□□□□ -0.64
CD9-208ENST00000538834 ZNF554Q86TJ5 538 aa11.04□□□□□ -0.64
CD9-208ENST00000538834 LINC00311Q8N616 119 aa11.04□□□□□ -0.64
CD9-208ENST00000538834 OR9G1Q8NH87 305 aa11.04□□□□□ -0.64
CD9-208ENST00000538834 LINC01006Q8NI28 216 aa11.04□□□□□ -0.64
CD9-208ENST00000538834 MRGPRDQ8TDS7 321 aa11.04□□□□□ -0.64
CD9-208ENST00000538834 NICN1Q9BSH3 213 aa11.04□□□□□ -0.64
CD9-208ENST00000538834 KCNK15Q9H427 330 aa11.04□□□□□ -0.64
CD9-208ENST00000538834 DPM3Q9P2X0 92 aa11.04□□□□□ -0.64
CD9-208ENST00000538834 PEX16Q9Y5Y5 336 aa11.04□□□□□ -0.64
CD9-208ENST00000538834 FBN3Q75N90 2809 aa11.04□□□□□ -0.64
CD9-208ENST00000538834 TRBV6-6A0A0A6YYG2 114 aa11.03□□□□□ -0.64
CD9-208ENST00000538834 FAM90A9PA6NNJ1 464 aa11.03□□□□□ -0.64
CD9-208ENST00000538834 J3QR06 171 aa11.03□□□□□ -0.64
CD9-208ENST00000538834 CHST1O43916 411 aa11.03□□□□□ -0.64
CD9-208ENST00000538834 MPIG6BO95866 241 aa11.03□□□□□ -0.64
CD9-208ENST00000538834 NAPSAO96009 420 aa11.03□□□□□ -0.64
CD9-208ENST00000538834 JUNBP17275 347 aaPredicted RBP11.03□□□□□ -0.64
CD9-208ENST00000538834 GLP1RP43220 463 aa11.03□□□□□ -0.64
CD9-208ENST00000538834 RAG2P55895 527 aa11.03□□□□□ -0.64
CD9-208ENST00000538834 PROK1P58294 105 aa11.03□□□□□ -0.64
CD9-208ENST00000538834 SSX2Q16385 188 aa11.03□□□□□ -0.64
CD9-208ENST00000538834 C2orf76Q3KRA6 126 aa11.03□□□□□ -0.64
CD9-208ENST00000538834 LIAT1Q6ZQX7 453 aa11.03□□□□□ -0.64
CD9-208ENST00000538834 ZNF439Q8NDP4 499 aa11.03□□□□□ -0.64
CD9-208ENST00000538834 MRPL30Q8TCC3 161 aaKnown RBP11.03□□□□□ -0.64
CD9-208ENST00000538834 FAM46BQ96A09 425 aa11.03□□□□□ -0.64
CD9-208ENST00000538834 SULT4A1Q9BR01 284 aa11.03□□□□□ -0.64
CD9-208ENST00000538834 TMEM59Q9BXS4 323 aa11.03□□□□□ -0.64
CD9-208ENST00000538834 TNFRSF19Q9NS68 423 aa11.03□□□□□ -0.64
CD9-208ENST00000538834 TXNL4BQ9NX01 149 aaKnown RBP11.03□□□□□ -0.64
CD9-208ENST00000538834 ING3Q9NXR8 418 aa11.03□□□□□ -0.64
CD9-208ENST00000538834 HSF4Q9ULV5 492 aa11.03□□□□□ -0.64
CD9-208ENST00000538834 PSG11Q9UQ72 335 aa11.03□□□□□ -0.64
CD9-208ENST00000538834 TCF19Q9Y242 345 aa11.03□□□□□ -0.64
CD9-208ENST00000538834 CLPSL1A2RUU4 121 aa11.02□□□□□ -0.65
CD9-208ENST00000538834 IFITM5A6NNB3 132 aa11.02□□□□□ -0.65
CD9-208ENST00000538834 OOSP1A8MZH6 123 aa11.02□□□□□ -0.65
CD9-208ENST00000538834 C12orf77C9JDV5 145 aa11.02□□□□□ -0.65
CD9-208ENST00000538834 ARSBP15848 533 aa11.02□□□□□ -0.65
CD9-208ENST00000538834 RCC1P18754 421 aaPredicted RBP11.02□□□□□ -0.65
CD9-208ENST00000538834 KIR2DS4P43632 304 aa11.02□□□□□ -0.65
CD9-208ENST00000538834 OR10A3P58181 314 aa11.02□□□□□ -0.65
CD9-208ENST00000538834 HABP2Q14520 560 aaPredicted RBP11.02□□□□□ -0.65
CD9-208ENST00000538834 LY6G6FQ5SQ64 297 aa11.02□□□□□ -0.65
CD9-208ENST00000538834 Q8N2B8 174 aa11.02□□□□□ -0.65
CD9-208ENST00000538834 OR51D1Q8NGF3 324 aa11.02□□□□□ -0.65
CD9-208ENST00000538834 OR4F5Q8NH21 305 aa11.02□□□□□ -0.65
CD9-208ENST00000538834 RFESDQ8TAC1 157 aa11.02□□□□□ -0.65
CD9-208ENST00000538834 ST6GALNAC6Q969X2 333 aa11.02□□□□□ -0.65
CD9-208ENST00000538834 CREB3L1Q96BA8 519 aa11.02□□□□□ -0.65
CD9-208ENST00000538834 FAM3DQ96BQ1 224 aa11.02□□□□□ -0.65
CD9-208ENST00000538834 MMP28Q9H239 520 aa11.02□□□□□ -0.65
CD9-208ENST00000538834 GFOD1Q9NXC2 390 aa11.02□□□□□ -0.65
CD9-208ENST00000538834 ETAA1Q9NY74 926 aa11.02□□□□□ -0.65
CD9-208ENST00000538834 STEAP1Q9UHE8 339 aa11.02□□□□□ -0.65
CD9-208ENST00000538834 STUB1Q9UNE7 303 aa11.02□□□□□ -0.65
CD9-208ENST00000538834 LEUTXA8MZ59 168 aa11.01□□□□□ -0.65
CD9-208ENST00000538834 AIPO00170 330 aa11.01□□□□□ -0.65
CD9-208ENST00000538834 SOCS1O15524 211 aa11.01□□□□□ -0.65
CD9-208ENST00000538834 PSMB9P28065 219 aa11.01□□□□□ -0.65
CD9-208ENST00000538834 RAB13P51153 203 aa11.01□□□□□ -0.65
CD9-208ENST00000538834 ZNF137PP52743 207 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms