RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 ACSF3Q4G176 576 aaPredicted RBP9.17□□□□□ -0.94
CLIP1-210ENST00000538120 BTNL8Q6UX41 500 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 Q6ZPA2 131 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 Q6ZT83 130 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 OR5P3Q8WZ94 311 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 ISOC2Q96AB3 205 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 C2orf50Q96LR7 162 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 OPA3Q9H6K4 179 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 EHFQ9NZC4 300 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 DAOP14920 347 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 ZNF44P15621 663 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 BCL3P20749 454 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 CHRFAM7AQ494W8 412 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 OR5A2Q8NGI9 324 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 SLAMF9Q96A28 289 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 SAT2Q96F10 170 aaPredicted RBP9.16□□□□□ -0.94
CLIP1-210ENST00000538120 COL25A1Q9BXS0 654 aaPredicted RBP9.16□□□□□ -0.94
CLIP1-210ENST00000538120 LIME1Q9H400 295 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 MTCH1Q9NZJ7 389 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 RIF1Q5UIP0 2472 aaKnown RBP9.16□□□□□ -0.94
CLIP1-210ENST00000538120 KLK10O43240 276 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 PDCD6O75340 191 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 IFNA4P05014 189 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 DTYMKP23919 212 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 OPRM1P35372 400 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 PTGER4P35408 488 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 IGFBP7Q16270 282 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 OR2T2Q6IF00 324 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 Q6ZRG5 221 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 Q6ZS92 163 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 SEM1Q6ZVN7 128 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 SAXO1Q8IYX7 474 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 CNEP1R1Q8N9A8 125 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 HIST1H2BAQ96A08 127 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 BSCL2Q96G97 398 aaPredicted RBP9.16□□□□□ -0.94
CLIP1-210ENST00000538120 KIRREL1Q96J84 757 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 C20orf24Q9BUV8 137 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 RPS10P5Q9NQ39 176 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 CACFD1Q9UGQ2 172 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 ANXA10Q9UJ72 324 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 MUC6Q6W4X9 2439 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 AKAP13Q12802 2813 aa9.16□□□□□ -0.94
CLIP1-210ENST00000538120 PROB1E7EW31 1015 aa9.15□□□□□ -0.94
CLIP1-210ENST00000538120 SPINK2P20155 84 aa9.15□□□□□ -0.94
CLIP1-210ENST00000538120 COX5AP20674 150 aa9.15□□□□□ -0.94
CLIP1-210ENST00000538120 SULT1A2P50226 295 aa9.15□□□□□ -0.94
CLIP1-210ENST00000538120 SPATA46Q5T0L3 261 aa9.15□□□□□ -0.94
CLIP1-210ENST00000538120 TMEM268Q5VZI3 342 aa9.15□□□□□ -0.94
CLIP1-210ENST00000538120 WDR31Q8NA23 367 aa9.15□□□□□ -0.94
CLIP1-210ENST00000538120 BOD1Q96IK1 185 aa9.15□□□□□ -0.94
CLIP1-210ENST00000538120 FBXL17Q9UF56 701 aa9.15□□□□□ -0.94
CLIP1-210ENST00000538120 MED19A0JLT2 244 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-210ENST00000538120 C5orf52A6NGY3 159 aa9.15□□□□□ -0.94
CLIP1-210ENST00000538120 AHRRA9YTQ3 701 aa9.15□□□□□ -0.94
CLIP1-210ENST00000538120 SYNGR1O43759 233 aa9.15□□□□□ -0.94
CLIP1-210ENST00000538120 ZNF205O95201 554 aa9.15□□□□□ -0.94
CLIP1-210ENST00000538120 PTAFRP25105 342 aa9.15□□□□□ -0.94
CLIP1-210ENST00000538120 RPL12P30050 165 aaKnown RBP9.15□□□□□ -0.94
CLIP1-210ENST00000538120 FHITP49789 147 aa9.15□□□□□ -0.94
CLIP1-210ENST00000538120 UBE2NP61088 152 aaKnown RBP9.15□□□□□ -0.94
CLIP1-210ENST00000538120 TGFBR3Q03167 851 aa9.15□□□□□ -0.94
CLIP1-210ENST00000538120 TBC1D28Q2M2D7 210 aa9.15□□□□□ -0.94
CLIP1-210ENST00000538120 IAH1Q2TAA2 248 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-210ENST00000538120 NSUN5P2Q63ZY6 315 aa9.15□□□□□ -0.94
CLIP1-210ENST00000538120 RBMXL3Q8N7X1 1067 aaKnown RBP9.15□□□□□ -0.94
CLIP1-210ENST00000538120 OR5L1Q8NGL2 311 aa9.15□□□□□ -0.94
CLIP1-210ENST00000538120 MARS2Q96GW9 593 aaKnown RBP9.15□□□□□ -0.94
CLIP1-210ENST00000538120 SMCO4Q9NRQ5 59 aa9.15□□□□□ -0.94
CLIP1-210ENST00000538120 IL36RNQ9UBH0 155 aa9.15□□□□□ -0.94
CLIP1-210ENST00000538120 IL19Q9UHD0 177 aa9.15□□□□□ -0.94
CLIP1-210ENST00000538120 AMDHD2Q9Y303 409 aa9.15□□□□□ -0.94
CLIP1-210ENST00000538120 FAM186AA6NE01 2351 aa9.15□□□□□ -0.94
CLIP1-210ENST00000538120 DOCK7Q96N67 2140 aa9.15□□□□□ -0.95
CLIP1-210ENST00000538120 GVINP1Q7Z2Y8 2422 aa9.14□□□□□ -0.95
CLIP1-210ENST00000538120 NDUFS6O75380 124 aaKnown RBP9.14□□□□□ -0.95
CLIP1-210ENST00000538120 TNFSF13O75888 250 aa9.14□□□□□ -0.95
CLIP1-210ENST00000538120 CGAP01215 116 aa9.14□□□□□ -0.95
CLIP1-210ENST00000538120 FUT3P21217 361 aa9.14□□□□□ -0.95
CLIP1-210ENST00000538120 FCGR2CP31995 323 aa9.14□□□□□ -0.95
CLIP1-210ENST00000538120 PMELP40967 661 aa9.14□□□□□ -0.95
CLIP1-210ENST00000538120 IDH3GP51553 393 aaPredicted RBP9.14□□□□□ -0.95
CLIP1-210ENST00000538120 RAB5BP61020 215 aa9.14□□□□□ -0.95
CLIP1-210ENST00000538120 FGF12P61328 243 aa9.14□□□□□ -0.95
CLIP1-210ENST00000538120 ERVS71-1P61550 626 aa9.14□□□□□ -0.95
CLIP1-210ENST00000538120 EIF2S3LQ2VIR3 472 aaKnown RBP9.14□□□□□ -0.95
CLIP1-210ENST00000538120 INO80CQ6PI98 192 aaPredicted RBP9.14□□□□□ -0.95
CLIP1-210ENST00000538120 TREML4Q6UXN2 200 aa9.14□□□□□ -0.95
CLIP1-210ENST00000538120 FBXW12Q6X9E4 464 aa9.14□□□□□ -0.95
CLIP1-210ENST00000538120 ERGIC1Q969X5 290 aa9.14□□□□□ -0.95
CLIP1-210ENST00000538120 CNTNAP3Q9BZ76 1288 aa9.14□□□□□ -0.95
CLIP1-210ENST00000538120 DNAJB11Q9UBS4 358 aa9.14□□□□□ -0.95
CLIP1-210ENST00000538120 MPC1Q9Y5U8 109 aa9.14□□□□□ -0.95
CLIP1-210ENST00000538120 ANKRD30BLA7E2S9 258 aa9.14□□□□□ -0.95
CLIP1-210ENST00000538120 CA6P23280 308 aa9.14□□□□□ -0.95
CLIP1-210ENST00000538120 BMI1P35226 326 aa9.14□□□□□ -0.95
CLIP1-210ENST00000538120 DVL1P1P54792 670 aaPredicted RBP9.14□□□□□ -0.95
CLIP1-210ENST00000538120 TMEM33P57088 247 aa9.14□□□□□ -0.95
CLIP1-210ENST00000538120 STARD4Q96DR4 205 aa9.14□□□□□ -0.95
CLIP1-210ENST00000538120 HIST1H2AAQ96QV6 131 aa9.14□□□□□ -0.95
CLIP1-210ENST00000538120 ZNF2Q9BSG1 426 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms