RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 DEGS1O15121 323 aa13.21□□□□□ -0.29
ATL3-202ENST00000535789 HTR3BO95264 441 aa13.21□□□□□ -0.29
ATL3-202ENST00000535789 SERPINA2P20848 420 aa13.21□□□□□ -0.29
ATL3-202ENST00000535789 CDK2P24941 298 aa13.21□□□□□ -0.29
ATL3-202ENST00000535789 RBM11P57052 281 aaKnown RBP13.21□□□□□ -0.29
ATL3-202ENST00000535789 RSU1Q15404 277 aa13.21□□□□□ -0.29
ATL3-202ENST00000535789 NHLRC3Q5JS37 347 aa13.21□□□□□ -0.29
ATL3-202ENST00000535789 SLC35E4Q6ICL7 350 aa13.21□□□□□ -0.29
ATL3-202ENST00000535789 SFXN4Q6P4A7 337 aa13.21□□□□□ -0.29
ATL3-202ENST00000535789 HEPN1Q6WQI6 88 aa13.21□□□□□ -0.29
ATL3-202ENST00000535789 CLEC7AQ9BXN2 247 aa13.21□□□□□ -0.29
ATL3-202ENST00000535789 SLIRPQ9GZT3 109 aaKnown RBP13.21□□□□□ -0.29
ATL3-202ENST00000535789 KIF25Q9UIL4 384 aa13.21□□□□□ -0.29
ATL3-202ENST00000535789 V9GY05 133 aa13.21□□□□□ -0.29
ATL3-202ENST00000535789 TRGV10A0A0A0MS01 117 aa13.2□□□□□ -0.3
ATL3-202ENST00000535789 GEMIN2O14893 280 aaKnown RBP13.2□□□□□ -0.3
ATL3-202ENST00000535789 MAGEB3O15480 346 aa13.2□□□□□ -0.3
ATL3-202ENST00000535789 IGLV1-47P01700 117 aa13.2□□□□□ -0.3
ATL3-202ENST00000535789 RORCP51449 518 aa13.2□□□□□ -0.3
ATL3-202ENST00000535789 LGALS4P56470 323 aa13.2□□□□□ -0.3
ATL3-202ENST00000535789 PAX5Q02548 391 aa13.2□□□□□ -0.3
ATL3-202ENST00000535789 DYNC1I2Q13409 638 aaKnown RBP13.2□□□□□ -0.3
ATL3-202ENST00000535789 SSX2Q16385 188 aa13.2□□□□□ -0.3
ATL3-202ENST00000535789 PAN3Q58A45 887 aaKnown RBP13.2□□□□□ -0.3
ATL3-202ENST00000535789 C1orf100Q5SVJ3 147 aa13.2□□□□□ -0.3
ATL3-202ENST00000535789 HIST2H2BDQ6DRA6 164 aa13.2□□□□□ -0.3
ATL3-202ENST00000535789 CDH26Q8IXH8 852 aa13.2□□□□□ -0.3
ATL3-202ENST00000535789 OR4D6Q8NGJ1 314 aa13.2□□□□□ -0.3
ATL3-202ENST00000535789 CPNE2Q96FN4 548 aaPredicted RBP13.2□□□□□ -0.3
ATL3-202ENST00000535789 IFT22Q9H7X7 185 aa13.2□□□□□ -0.3
ATL3-202ENST00000535789 TAS2R3Q9NYW6 316 aa13.2□□□□□ -0.3
ATL3-202ENST00000535789 PTTG2Q9NZH5 202 aa13.2□□□□□ -0.3
ATL3-202ENST00000535789 ING4Q9UNL4 249 aa13.2□□□□□ -0.3
ATL3-202ENST00000535789 TCF19Q9Y242 345 aa13.2□□□□□ -0.3
ATL3-202ENST00000535789 ST3GAL6Q9Y274 331 aa13.2□□□□□ -0.3
ATL3-202ENST00000535789 A0A087X0M5 115 aa13.19□□□□□ -0.3
ATL3-202ENST00000535789 TRAV39A0A0B4J263 110 aa13.19□□□□□ -0.3
ATL3-202ENST00000535789 A0A1B0GX30 115 aa13.19□□□□□ -0.3
ATL3-202ENST00000535789 A6NDX4 124 aa13.19□□□□□ -0.3
ATL3-202ENST00000535789 IFITM5A6NNB3 132 aa13.19□□□□□ -0.3
ATL3-202ENST00000535789 AIPO00170 330 aa13.19□□□□□ -0.3
ATL3-202ENST00000535789 SLC17A2O00624 439 aa13.19□□□□□ -0.3
ATL3-202ENST00000535789 CD34P28906 385 aa13.19□□□□□ -0.3
ATL3-202ENST00000535789 PSMD7P51665 324 aa13.19□□□□□ -0.3
ATL3-202ENST00000535789 FAM189A2Q15884 450 aa13.19□□□□□ -0.3
ATL3-202ENST00000535789 GLT8D1Q68CQ7 371 aa13.19□□□□□ -0.3
ATL3-202ENST00000535789 TMEM219Q86XT9 240 aa13.19□□□□□ -0.3
ATL3-202ENST00000535789 CROCCP3Q8IVE0 287 aa13.19□□□□□ -0.3
ATL3-202ENST00000535789 OSR2Q8N2R0 312 aa13.19□□□□□ -0.3
ATL3-202ENST00000535789 SUMF2Q8NBJ7 301 aa13.19□□□□□ -0.3
ATL3-202ENST00000535789 FOXRED1Q96CU9 486 aaPredicted RBP13.19□□□□□ -0.3
ATL3-202ENST00000535789 MALSU1Q96EH3 234 aa13.19□□□□□ -0.3
ATL3-202ENST00000535789 KIRREL1Q96J84 757 aa13.19□□□□□ -0.3
ATL3-202ENST00000535789 NXF2Q9GZY0 626 aaKnown RBP13.19□□□□□ -0.3
ATL3-202ENST00000535789 METTL9Q9H1A3 318 aa13.19□□□□□ -0.3
ATL3-202ENST00000535789 GAL3ST2Q9H3Q3 398 aa13.19□□□□□ -0.3
ATL3-202ENST00000535789 HILPDAQ9Y5L2 63 aa13.19□□□□□ -0.3
ATL3-202ENST00000535789 ZNF729A6NN14 1252 aaPredicted RBP13.18□□□□□ -0.3
ATL3-202ENST00000535789 SLC2A2P11168 524 aaPredicted RBP13.18□□□□□ -0.3
ATL3-202ENST00000535789 SSTR5P35346 364 aa13.18□□□□□ -0.3
ATL3-202ENST00000535789 SOX6P35712 828 aa13.18□□□□□ -0.3
ATL3-202ENST00000535789 GLP1RP43220 463 aa13.18□□□□□ -0.3
ATL3-202ENST00000535789 EFNB2P52799 333 aa13.18□□□□□ -0.3
ATL3-202ENST00000535789 HES5Q5TA89 166 aa13.18□□□□□ -0.3
ATL3-202ENST00000535789 BRICD5Q6PL45 260 aa13.18□□□□□ -0.3
ATL3-202ENST00000535789 JAGN1Q8N5M9 183 aa13.18□□□□□ -0.3
ATL3-202ENST00000535789 UQCC2Q9BRT2 126 aa13.18□□□□□ -0.3
ATL3-202ENST00000535789 DPCDQ9BVM2 203 aaPredicted RBP13.18□□□□□ -0.3
ATL3-202ENST00000535789 ZNF702PQ9H963 129 aa13.18□□□□□ -0.3
ATL3-202ENST00000535789 DAPK2Q9UIK4 370 aa13.18□□□□□ -0.3
ATL3-202ENST00000535789 MRPS28Q9Y2Q9 187 aaKnown RBP13.18□□□□□ -0.3
ATL3-202ENST00000535789 OR7C1O76099 320 aaPredicted RBP13.17□□□□□ -0.3
ATL3-202ENST00000535789 HABP2Q14520 560 aaPredicted RBP13.17□□□□□ -0.3
ATL3-202ENST00000535789 SLC22A6Q4U2R8 563 aa13.17□□□□□ -0.3
ATL3-202ENST00000535789 IDNKQ5T6J7 187 aa13.17□□□□□ -0.3
ATL3-202ENST00000535789 MINOS1Q5TGZ0 78 aa13.17□□□□□ -0.3
ATL3-202ENST00000535789 Q6ZS46 218 aa13.17□□□□□ -0.3
ATL3-202ENST00000535789 ABHD12Q8N2K0 398 aa13.17□□□□□ -0.3
ATL3-202ENST00000535789 TMEM104Q8NE00 496 aa13.17□□□□□ -0.3
ATL3-202ENST00000535789 OR6M1Q8NGM8 313 aa13.17□□□□□ -0.3
ATL3-202ENST00000535789 MRGPRDQ8TDS7 321 aa13.17□□□□□ -0.3
ATL3-202ENST00000535789 LINC00574Q9H8X3 128 aa13.17□□□□□ -0.3
ATL3-202ENST00000535789 CALYQ9NYX4 217 aa13.17□□□□□ -0.3
ATL3-202ENST00000535789 RCC2Q9P258 522 aaKnown RBP13.17□□□□□ -0.3
ATL3-202ENST00000535789 FBLN5Q9UBX5 448 aa13.17□□□□□ -0.3
ATL3-202ENST00000535789 STEAP1Q9UHE8 339 aa13.17□□□□□ -0.3
ATL3-202ENST00000535789 MINOS1-NBL1R4GNA1 71 aa13.17□□□□□ -0.3
ATL3-202ENST00000535789 A0A075B6Q4 140 aa13.16□□□□□ -0.3
ATL3-202ENST00000535789 MEIKINA0A087WXM9 373 aa13.16□□□□□ -0.3
ATL3-202ENST00000535789 A0A0B4J203 849 aa13.16□□□□□ -0.3
ATL3-202ENST00000535789 KBTBD11-OT1A0A1B0GTJ5 212 aa13.16□□□□□ -0.3
ATL3-202ENST00000535789 FUOMA2VDF0 154 aa13.16□□□□□ -0.3
ATL3-202ENST00000535789 NPIPB11E5RHQ5 1161 aa13.16□□□□□ -0.3
ATL3-202ENST00000535789 TMEM127O75204 238 aa13.16□□□□□ -0.3
ATL3-202ENST00000535789 HTR2CP28335 458 aa13.16□□□□□ -0.3
ATL3-202ENST00000535789 DYNLT3P51808 116 aa13.16□□□□□ -0.3
ATL3-202ENST00000535789 CLDN12P56749 244 aa13.16□□□□□ -0.3
ATL3-202ENST00000535789 RAB11BQ15907 218 aa13.16□□□□□ -0.3
ATL3-202ENST00000535789 HLA-DRB5Q30154 266 aa13.16□□□□□ -0.3
ATL3-202ENST00000535789 FAM53AQ6NSI3 398 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms