RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 C2CD3Q4AC94 2353 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 IGHV1-69DA0A0B4J2H0 117 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 RGS13O14921 159 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 CA11O75493 328 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 MMP23AO75900 390 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 IGHV1-69P01742 117 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 IGHV1-8P0DP01 117 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 GLP1RP43220 463 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 TMBIM6P55061 237 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 OXA1LQ15070 435 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 C17orf58Q2M2W7 97 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 MOGAT2Q3SYC2 334 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 PLAC9Q5JTB6 97 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 PRAMEF5Q5TYX0 476 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 GPR157Q5UAW9 335 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 RUSC1-AS1Q66K80 236 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 NCR3LG1Q68D85 454 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 BRD3OSQ6XYD6 125 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 BCL6BQ8N143 479 aaPredicted RBP9.86□□□□□ -0.83
CHD4-203ENST00000535717 ZNF565Q8N9K5 539 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 MRGPRDQ8TDS7 321 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 CHAC2Q8WUX2 184 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 CCDC107Q8WV48 283 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 C22orf15Q8WYQ4 148 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 ARHGAP5-AS1Q96IT6 56 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 PECRQ9BY49 303 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 ATG5Q9H1Y0 275 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 DCSTAMPQ9H295 470 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 GAL3ST2Q9H3Q3 398 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 PLEKHJ1Q9NW61 149 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 HSF4Q9ULV5 492 aa9.86□□□□□ -0.83
CHD4-203ENST00000535717 KBTBD11-OT1A0A1B0GTJ5 212 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 METTL21EPA6NDL7 271 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 ZNF729A6NN14 1252 aaPredicted RBP9.85□□□□□ -0.83
CHD4-203ENST00000535717 RAB27BO00194 218 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 TMEM127O75204 238 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 CLPXO76031 633 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 OMGP23515 440 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 CDK2P24941 298 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 GDNFP39905 211 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 SCAND1P57086 179 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 FAM189A2Q15884 450 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 HEPN1Q6WQI6 88 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 Q6ZTK2 550 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 C9orf139Q6ZV77 190 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 USP43Q70EL4 1123 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 PNKDQ8N490 385 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 OR10R2Q8NGX6 335 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 OR4K15Q8NH41 348 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 MRPL30Q8TCC3 161 aaKnown RBP9.85□□□□□ -0.83
CHD4-203ENST00000535717 RAB2BQ8WUD1 216 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 SLC25A38Q96DW6 304 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 MS4A7Q9GZW8 240 aaPredicted RBP9.85□□□□□ -0.83
CHD4-203ENST00000535717 HEXA-AS1Q9H8Q6 139 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 LINC00574Q9H8X3 128 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 CALYQ9NYX4 217 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 ABRACLQ9P1F3 81 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 AK3Q9UIJ7 227 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 ETV7Q9Y603 341 aa9.85□□□□□ -0.83
CHD4-203ENST00000535717 A0A1W2PRD5 423 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 A0A1W2PRF3 423 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 A0A1W2PRM7 423 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 H3BMQ9 156 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 NAPSAO96009 420 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 RCC1P18754 421 aaPredicted RBP9.84□□□□□ -0.83
CHD4-203ENST00000535717 GZMHP20718 246 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 COX7A1P24310 79 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 FPR2P25090 351 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 SSTR5P35346 364 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 UBE2E1P51965 193 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 BPIFB3P59826 476 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 ARPC4P59998 168 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 GUCA2AQ02747 115 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 SCGB2A2Q13296 93 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 TUSC1Q2TAM9 212 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 OLFML2AQ68BL7 652 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 BAIAP2L2Q6UXY1 529 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 RFESDQ8TAC1 157 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 RAB3CQ96E17 227 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 SLC6A7Q99884 636 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 WDR12Q9GZL7 423 aaKnown RBP9.84□□□□□ -0.83
CHD4-203ENST00000535717 TRAPPC2LQ9UL33 140 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 SPATA2Q9UM82 520 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 KCNK7Q9Y2U2 307 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 SESN1Q9Y6P5 492 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 ATRQ13535 2644 aa9.84□□□□□ -0.83
CHD4-203ENST00000535717 C12orf77C9JDV5 145 aa9.83□□□□□ -0.84
CHD4-203ENST00000535717 NPIPB11E5RHQ5 1161 aa9.83□□□□□ -0.84
CHD4-203ENST00000535717 C15orf65H3BRN8 121 aa9.83□□□□□ -0.84
CHD4-203ENST00000535717 NPFFO15130 113 aa9.83□□□□□ -0.84
CHD4-203ENST00000535717 ORC5O43913 435 aa9.83□□□□□ -0.84
CHD4-203ENST00000535717 HIST1H1DP16402 221 aaKnown RBP9.83□□□□□ -0.84
CHD4-203ENST00000535717 GNB3P16520 340 aa9.83□□□□□ -0.84
CHD4-203ENST00000535717 RORCP51449 518 aa9.83□□□□□ -0.84
CHD4-203ENST00000535717 UTF1Q5T230 341 aa9.83□□□□□ -0.84
CHD4-203ENST00000535717 Q6ZPA2 131 aa9.83□□□□□ -0.84
CHD4-203ENST00000535717 PRIMA1Q86XR5 153 aa9.83□□□□□ -0.84
CHD4-203ENST00000535717 OR13D1Q8NGV5 346 aa9.83□□□□□ -0.84
CHD4-203ENST00000535717 UBALD1Q8TB05 177 aa9.83□□□□□ -0.84
CHD4-203ENST00000535717 ARL11Q969Q4 196 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms