RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 ATAD3CQ5T2N8 411 aa12.88□□□□□ -0.35
CLSTN3-204ENST00000535313 OR8H3Q8N146 312 aa12.88□□□□□ -0.35
CLSTN3-204ENST00000535313 OR13C5Q8NGS8 318 aa12.88□□□□□ -0.35
CLSTN3-204ENST00000535313 NEK7Q8TDX7 302 aa12.88□□□□□ -0.35
CLSTN3-204ENST00000535313 MYDGFQ969H8 173 aa12.88□□□□□ -0.35
CLSTN3-204ENST00000535313 ZNF184Q99676 751 aaPredicted RBP12.88□□□□□ -0.35
CLSTN3-204ENST00000535313 ZNF581Q9P0T4 197 aa12.88□□□□□ -0.35
CLSTN3-204ENST00000535313 TRBV5-5A0A0J9YX44 114 aa12.87□□□□□ -0.35
CLSTN3-204ENST00000535313 A0A1W2PPI3 338 aa12.87□□□□□ -0.35
CLSTN3-204ENST00000535313 PIN1P1O15428 100 aa12.87□□□□□ -0.35
CLSTN3-204ENST00000535313 ATP6V1G2O95670 118 aa12.87□□□□□ -0.35
CLSTN3-204ENST00000535313 TMEM11P17152 192 aa12.87□□□□□ -0.35
CLSTN3-204ENST00000535313 IGFBP3P17936 291 aaPredicted RBP12.87□□□□□ -0.35
CLSTN3-204ENST00000535313 GPR176Q14439 515 aa12.87□□□□□ -0.35
CLSTN3-204ENST00000535313 Q499Y3 187 aa12.87□□□□□ -0.35
CLSTN3-204ENST00000535313 DMKNQ6E0U4 476 aaPredicted RBP12.87□□□□□ -0.35
CLSTN3-204ENST00000535313 Q6ZPA2 131 aa12.87□□□□□ -0.35
CLSTN3-204ENST00000535313 DHRSXQ8N5I4 330 aa12.87□□□□□ -0.35
CLSTN3-204ENST00000535313 PACRGLQ8N7B6 248 aa12.87□□□□□ -0.35
CLSTN3-204ENST00000535313 WFDC9Q8NEX5 89 aa12.87□□□□□ -0.35
CLSTN3-204ENST00000535313 MRAPQ8TCY5 172 aa12.87□□□□□ -0.35
CLSTN3-204ENST00000535313 PHF21AQ96BD5 680 aa12.87□□□□□ -0.35
CLSTN3-204ENST00000535313 ORAI1Q96D31 301 aa12.87□□□□□ -0.35
CLSTN3-204ENST00000535313 GPX5O75715 221 aa12.86□□□□□ -0.35
CLSTN3-204ENST00000535313 LALBAP00709 142 aa12.86□□□□□ -0.35
CLSTN3-204ENST00000535313 DIAPH2-AS1Q14236 149 aa12.86□□□□□ -0.35
CLSTN3-204ENST00000535313 HNF4GQ14541 408 aa12.86□□□□□ -0.35
CLSTN3-204ENST00000535313 STX19Q8N4C7 294 aa12.86□□□□□ -0.35
CLSTN3-204ENST00000535313 ZFP41Q8N8Y5 198 aa12.86□□□□□ -0.35
CLSTN3-204ENST00000535313 CCDC107Q8WV48 283 aa12.86□□□□□ -0.35
CLSTN3-204ENST00000535313 GGHQ92820 318 aa12.86□□□□□ -0.35
CLSTN3-204ENST00000535313 ARL11Q969Q4 196 aa12.86□□□□□ -0.35
CLSTN3-204ENST00000535313 SPACA1Q9HBV2 294 aa12.86□□□□□ -0.35
CLSTN3-204ENST00000535313 A0A1W2PPE3 182 aa12.85□□□□□ -0.35
CLSTN3-204ENST00000535313 PSMB11A5LHX3 300 aa12.85□□□□□ -0.35
CLSTN3-204ENST00000535313 EFCAB10A6NFE3 127 aa12.85□□□□□ -0.35
CLSTN3-204ENST00000535313 CCRL2O00421 344 aa12.85□□□□□ -0.35
CLSTN3-204ENST00000535313 SDCBPO00560 298 aaPredicted RBP12.85□□□□□ -0.35
CLSTN3-204ENST00000535313 HSD17B6O14756 317 aa12.85□□□□□ -0.35
CLSTN3-204ENST00000535313 IGKV1D-33P01593 117 aa12.85□□□□□ -0.35
CLSTN3-204ENST00000535313 IGKV1-33P01594 117 aa12.85□□□□□ -0.35
CLSTN3-204ENST00000535313 GAPDHP04406 335 aaKnown RBP12.85□□□□□ -0.35
CLSTN3-204ENST00000535313 IGLL1P15814 213 aa12.85□□□□□ -0.35
CLSTN3-204ENST00000535313 LOXL3P58215 753 aa12.85□□□□□ -0.35
CLSTN3-204ENST00000535313 TAS2R43P59537 309 aa12.85□□□□□ -0.35
CLSTN3-204ENST00000535313 SLC35A2P78381 396 aa12.85□□□□□ -0.35
CLSTN3-204ENST00000535313 ADARB1P78563 741 aaKnown RBP12.85□□□□□ -0.35
CLSTN3-204ENST00000535313 ST3GAL4Q11206 333 aa12.85□□□□□ -0.35
CLSTN3-204ENST00000535313 C10orf99Q6UWK7 81 aa12.85□□□□□ -0.35
CLSTN3-204ENST00000535313 MOB3BQ86TA1 216 aa12.85□□□□□ -0.35
CLSTN3-204ENST00000535313 JAGN1Q8N5M9 183 aa12.85□□□□□ -0.35
CLSTN3-204ENST00000535313 C5orf56Q8N8D9 126 aa12.85□□□□□ -0.35
CLSTN3-204ENST00000535313 OR52M1Q8NGK5 317 aa12.85□□□□□ -0.35
CLSTN3-204ENST00000535313 PGLYRP3Q96LB9 341 aa12.85□□□□□ -0.35
CLSTN3-204ENST00000535313 MRPS28Q9Y2Q9 187 aaKnown RBP12.85□□□□□ -0.35
CLSTN3-204ENST00000535313 TRAV8-7A0A075B6U6 113 aa12.84□□□□□ -0.35
CLSTN3-204ENST00000535313 A0A1W2PP11 408 aa12.84□□□□□ -0.35
CLSTN3-204ENST00000535313 MAGEA13PA6NCF6 341 aa12.84□□□□□ -0.35
CLSTN3-204ENST00000535313 MCRIP1C9JLW8 97 aa12.84□□□□□ -0.35
CLSTN3-204ENST00000535313 H0YHG0 523 aa12.84□□□□□ -0.35
CLSTN3-204ENST00000535313 AIPO00170 330 aa12.84□□□□□ -0.35
CLSTN3-204ENST00000535313 FGF16O43320 207 aa12.84□□□□□ -0.35
CLSTN3-204ENST00000535313 ORC5O43913 435 aa12.84□□□□□ -0.35
CLSTN3-204ENST00000535313 FSTP19883 344 aa12.84□□□□□ -0.35
CLSTN3-204ENST00000535313 IL3RAP26951 378 aa12.84□□□□□ -0.35
CLSTN3-204ENST00000535313 RPS11P62280 158 aaKnown RBP eCLIP12.84□□□□□ -0.35
CLSTN3-204ENST00000535313 ZNF816Q0VGE8 651 aaPredicted RBP12.84□□□□□ -0.35
CLSTN3-204ENST00000535313 FOXB2Q5VYV0 432 aa12.84□□□□□ -0.35
CLSTN3-204ENST00000535313 GLIPR1L1Q6UWM5 242 aa12.84□□□□□ -0.35
CLSTN3-204ENST00000535313 ZNF497Q6ZNH5 498 aa12.84□□□□□ -0.35
CLSTN3-204ENST00000535313 CHPT1Q8WUD6 406 aa12.84□□□□□ -0.35
CLSTN3-204ENST00000535313 MUL1Q969V5 352 aa12.84□□□□□ -0.35
CLSTN3-204ENST00000535313 MRPS24Q96EL2 167 aaKnown RBP12.84□□□□□ -0.35
CLSTN3-204ENST00000535313 OR14A2Q96R54 314 aa12.84□□□□□ -0.35
CLSTN3-204ENST00000535313 RAB9BQ9NP90 201 aa12.84□□□□□ -0.35
CLSTN3-204ENST00000535313 AURKAIP1Q9NWT8 199 aaPredicted RBP12.84□□□□□ -0.35
CLSTN3-204ENST00000535313 GFOD1Q9NXC2 390 aa12.84□□□□□ -0.35
CLSTN3-204ENST00000535313 TRBV5-7A0A0A0MS05 114 aa12.83□□□□□ -0.36
CLSTN3-204ENST00000535313 IGHV1-3A0A0C4DH29 117 aa12.83□□□□□ -0.36
CLSTN3-204ENST00000535313 PNMA8CA0A1B0GUJ8 204 aa12.83□□□□□ -0.36
CLSTN3-204ENST00000535313 A0A1W2PPK0 400 aa12.83□□□□□ -0.36
CLSTN3-204ENST00000535313 SERPINE3A8MV23 424 aa12.83□□□□□ -0.36
CLSTN3-204ENST00000535313 C15orf65H3BRN8 121 aa12.83□□□□□ -0.36
CLSTN3-204ENST00000535313 MYL12BO14950 172 aa12.83□□□□□ -0.36
CLSTN3-204ENST00000535313 MT-ND4P03905 459 aa12.83□□□□□ -0.36
CLSTN3-204ENST00000535313 GNAO1P09471 354 aa12.83□□□□□ -0.36
CLSTN3-204ENST00000535313 REG1BP48304 166 aa12.83□□□□□ -0.36
CLSTN3-204ENST00000535313 AQP4P55087 323 aa12.83□□□□□ -0.36
CLSTN3-204ENST00000535313 AWAT2Q6E213 333 aa12.83□□□□□ -0.36
CLSTN3-204ENST00000535313 ZNF329Q86UD4 541 aa12.83□□□□□ -0.36
CLSTN3-204ENST00000535313 C8orf59Q8N0T1 100 aaPredicted RBP12.83□□□□□ -0.36
CLSTN3-204ENST00000535313 LINC00311Q8N616 119 aa12.83□□□□□ -0.36
CLSTN3-204ENST00000535313 C8orf31Q8N9H6 132 aa12.83□□□□□ -0.36
CLSTN3-204ENST00000535313 ZNF485Q8NCK3 441 aa12.83□□□□□ -0.36
CLSTN3-204ENST00000535313 UBALD1Q8TB05 177 aa12.83□□□□□ -0.36
CLSTN3-204ENST00000535313 RCC1LQ96I51 464 aaKnown RBP12.83□□□□□ -0.36
CLSTN3-204ENST00000535313 CNOT2Q9NZN8 540 aaKnown RBP12.83□□□□□ -0.36
CLSTN3-204ENST00000535313 TRAPPC2LQ9UL33 140 aa12.83□□□□□ -0.36
CLSTN3-204ENST00000535313 DNAH3Q8TD57 4116 aa12.82□□□□□ -0.36
CLSTN3-204ENST00000535313 SPINT2O43291 252 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms