RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 ZP3P21754 424 aa6.21□□□□□ -1.42
CLIP1-206ENST00000535290 C21orf33P30042 268 aaPredicted RBP6.21□□□□□ -1.42
CLIP1-206ENST00000535290 ROM1Q03395 351 aa6.21□□□□□ -1.42
CLIP1-206ENST00000535290 LRRC36Q1X8D7 754 aa6.21□□□□□ -1.42
CLIP1-206ENST00000535290 ZNF829Q3KNS6 432 aaPredicted RBP6.21□□□□□ -1.42
CLIP1-206ENST00000535290 PLEKHG7Q6ZR37 379 aa6.21□□□□□ -1.42
CLIP1-206ENST00000535290 SLC16A12Q6ZSM3 486 aa6.21□□□□□ -1.42
CLIP1-206ENST00000535290 CROCCP2Q86T23 111 aa6.21□□□□□ -1.42
CLIP1-206ENST00000535290 ZNF679Q8IYX0 411 aa6.21□□□□□ -1.42
CLIP1-206ENST00000535290 OR51T1Q8NGJ9 327 aa6.21□□□□□ -1.42
CLIP1-206ENST00000535290 RCN3Q96D15 328 aa6.21□□□□□ -1.42
CLIP1-206ENST00000535290 BORCS8Q96FH0 119 aa6.21□□□□□ -1.42
CLIP1-206ENST00000535290 COMMD4Q9H0A8 199 aa6.21□□□□□ -1.42
CLIP1-206ENST00000535290 RANGRFQ9HD47 186 aaPredicted RBP6.21□□□□□ -1.42
CLIP1-206ENST00000535290 KRT84Q9NSB2 600 aa6.21□□□□□ -1.42
CLIP1-206ENST00000535290 SLC2A8Q9NY64 477 aa6.21□□□□□ -1.42
CLIP1-206ENST00000535290 SLC23A1Q9UHI7 598 aa6.21□□□□□ -1.42
CLIP1-206ENST00000535290 A3GALT2U3KPV4 340 aa6.21□□□□□ -1.42
CLIP1-206ENST00000535290 DNAH6Q9C0G6 4158 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 LOC110117498-PIK3R3F6TDL0 507 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 DEGS1O15121 323 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 SLC31A2O15432 143 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 NDUFB8O95169 186 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 EGR2P11161 476 aaPredicted RBP6.2□□□□□ -1.42
CLIP1-206ENST00000535290 RIDAP52758 137 aaKnown RBP6.2□□□□□ -1.42
CLIP1-206ENST00000535290 TPPP2P59282 170 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 ACTBP60709 375 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 ZNF45Q02386 682 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 DYRK1AQ13627 763 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 CD300EQ496F6 205 aaPredicted RBP6.2□□□□□ -1.42
CLIP1-206ENST00000535290 BCL2L15Q5TBC7 163 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 GLYATQ6IB77 296 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 LIN54Q6MZP7 749 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 WDR93Q6P2C0 686 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 ARPINQ7Z6K5 226 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 TMEM179BQ7Z7N9 219 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 WFDC3Q8IUB2 231 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 RDH10Q8IZV5 341 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 LINC00311Q8N616 119 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 MAPKAPK5-AS1Q8N8E1 139 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 CHST4Q8NCG5 386 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 BBS1Q8NFJ9 593 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 OR10A7Q8NGE5 316 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 UTP4Q969X6 686 aaKnown RBP6.2□□□□□ -1.42
CLIP1-206ENST00000535290 RNF183Q96D59 192 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 KCTD14Q9BQ13 255 aaPredicted RBP6.2□□□□□ -1.42
CLIP1-206ENST00000535290 KRTAP4-8Q9BYQ9 185 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 CHST5Q9GZS9 411 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 CNOT2Q9NZN8 540 aaKnown RBP6.2□□□□□ -1.42
CLIP1-206ENST00000535290 OR52A1Q9UKL2 312 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 SAMD4AQ9UPU9 718 aaKnown RBP6.2□□□□□ -1.42
CLIP1-206ENST00000535290 NUBP2Q9Y5Y2 271 aa6.2□□□□□ -1.42
CLIP1-206ENST00000535290 IGKV1-9A0A0C4DH69 117 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 ZNF254O75437 659 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 E2F6O75461 281 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 GATBO75879 557 aaKnown RBP6.19□□□□□ -1.42
CLIP1-206ENST00000535290 CYB5AP00167 134 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 CCL1P22362 96 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 RBP2P50120 134 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 HMGA2P52926 109 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 CRIP2P52943 208 aaPredicted RBP6.19□□□□□ -1.42
CLIP1-206ENST00000535290 ATP1B3P54709 279 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 MTCP1P56278 107 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 CX3CL1P78423 397 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 PDZK1IP1Q13113 114 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 CDK5R1Q15078 307 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 MAPRE2Q15555 327 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 ODF4Q2M2E3 257 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 C5orf64Q2M2E5 130 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 LAX1Q8IWV1 398 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 AQP11Q8NBQ7 271 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 UBALD1Q8TB05 177 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 RFT1Q96AA3 541 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 PYURFQ96I23 114 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 APOL4Q9BPW4 351 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 GGTLC1Q9BX51 225 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 YIPF3Q9GZM5 350 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 NCOR1P1Q9H4R4 102 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 IL1RAPQ9NPH3 570 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 SAR1AQ9NR31 198 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 NDE1Q9NXR1 346 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 IKZF2Q9UKS7 526 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 ERGIC3Q9Y282 383 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 R4GMQ9 66 aa6.19□□□□□ -1.42
CLIP1-206ENST00000535290 PKD1P98161 4303 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 IGHV3-43A0A0B4J1X8 118 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 TRAV24A0A0B4J272 114 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 NBR2O15453 112 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 SPRY2O43597 315 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 KDM4BO94953 1096 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 TRGV3P03979 118 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 MRPL3P09001 348 aaKnown RBP6.18□□□□□ -1.42
CLIP1-206ENST00000535290 IGHV3-43DP0DP04 118 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 IL3RAP26951 378 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 BMI1P35226 326 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 ZNF134P52741 427 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 RPS7P62081 194 aaKnown RBP6.18□□□□□ -1.42
CLIP1-206ENST00000535290 PPP1R8Q12972 351 aaKnown RBP6.18□□□□□ -1.42
CLIP1-206ENST00000535290 LSAMPQ13449 338 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 APOFQ13790 326 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms