RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 ANAPC16Q96DE5 110 aa15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 STARD4Q96DR4 205 aa15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 NUP205Q92621 2012 aa15.88■□□□□ 0.13
SFSWAP-203ENST00000535236 CD1BP29016 333 aa15.88■□□□□ 0.13
SFSWAP-203ENST00000535236 ADAMTS17Q8TE56 1095 aa15.88■□□□□ 0.13
SFSWAP-203ENST00000535236 NPY1RP25929 384 aa15.88■□□□□ 0.13
SFSWAP-203ENST00000535236 CCL8P80075 99 aa15.88■□□□□ 0.13
SFSWAP-203ENST00000535236 PNRC1Q12796 327 aaPredicted RBP15.88■□□□□ 0.13
SFSWAP-203ENST00000535236 CHST5Q9GZS9 411 aa15.88■□□□□ 0.13
SFSWAP-203ENST00000535236 C5orf52A6NGY3 159 aa15.88■□□□□ 0.13
SFSWAP-203ENST00000535236 C9orf172C9J069 976 aa15.88■□□□□ 0.13
SFSWAP-203ENST00000535236 SULT1A1P50225 295 aa15.88■□□□□ 0.13
SFSWAP-203ENST00000535236 OR4D11Q8NGI4 311 aa15.88■□□□□ 0.13
SFSWAP-203ENST00000535236 IL22RA2Q969J5 263 aa15.88■□□□□ 0.13
SFSWAP-203ENST00000535236 OR51B2Q9Y5P1 312 aa15.88■□□□□ 0.13
SFSWAP-203ENST00000535236 A0A1W2PPE3 182 aa15.88■□□□□ 0.13
SFSWAP-203ENST00000535236 CEBPEQ15744 281 aa15.88■□□□□ 0.13
SFSWAP-203ENST00000535236 OR2T10Q8NGZ9 312 aa15.88■□□□□ 0.13
SFSWAP-203ENST00000535236 COLQQ9Y215 455 aaPredicted RBP15.88■□□□□ 0.13
SFSWAP-203ENST00000535236 DOCK1Q14185 1865 aa15.88■□□□□ 0.13
SFSWAP-203ENST00000535236 IGHV3-21A0A0B4J1V1 117 aa15.87■□□□□ 0.13
SFSWAP-203ENST00000535236 HMSDA8MTL9 139 aa15.87■□□□□ 0.13
SFSWAP-203ENST00000535236 ADRA2AP08913 450 aa15.87■□□□□ 0.13
SFSWAP-203ENST00000535236 PRDX2P32119 198 aa15.87■□□□□ 0.13
SFSWAP-203ENST00000535236 PPOXP50336 477 aa15.87■□□□□ 0.13
SFSWAP-203ENST00000535236 OPN3Q9H1Y3 402 aaPredicted RBP15.87■□□□□ 0.13
SFSWAP-203ENST00000535236 SLC2A9Q9NRM0 540 aa15.87■□□□□ 0.13
SFSWAP-203ENST00000535236 ECM29Q5VYK3 1845 aa15.87■□□□□ 0.13
SFSWAP-203ENST00000535236 LAMA4Q16363 1823 aa15.87■□□□□ 0.13
SFSWAP-203ENST00000535236 J3QR06 171 aa15.87■□□□□ 0.13
SFSWAP-203ENST00000535236 COX19Q49B96 90 aa15.87■□□□□ 0.13
SFSWAP-203ENST00000535236 A0A1W2PQF6 199 aa15.87■□□□□ 0.13
SFSWAP-203ENST00000535236 CIDEAO60543 219 aa15.87■□□□□ 0.13
SFSWAP-203ENST00000535236 NTN1O95631 604 aa15.87■□□□□ 0.13
SFSWAP-203ENST00000535236 C16orf82Q7Z2V1 217 aa15.87■□□□□ 0.13
SFSWAP-203ENST00000535236 ZNF714Q96N38 554 aa15.87■□□□□ 0.13
SFSWAP-203ENST00000535236 IGHV4-34P06331 123 aa15.87■□□□□ 0.13
SFSWAP-203ENST00000535236 B2MP61769 119 aa15.87■□□□□ 0.13
SFSWAP-203ENST00000535236 HIST3H3Q16695 136 aa15.87■□□□□ 0.13
SFSWAP-203ENST00000535236 ZNF385AQ96PM9 386 aaKnown RBP15.87■□□□□ 0.13
SFSWAP-203ENST00000535236 TMEM191AQ9H0A3 160 aa15.87■□□□□ 0.13
SFSWAP-203ENST00000535236 SCN9AQ15858 1988 aa15.87■□□□□ 0.13
SFSWAP-203ENST00000535236 KIR3DL2P43630 455 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 SLC35B1P78383 322 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 TEPPQ6URK8 271 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 TEX29Q8N6K0 151 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 CLDN14O95500 239 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 DAOP14920 347 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 INPP5JQ15735 1006 aaPredicted RBP15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 ZNF658BQ4V348 819 aaPredicted RBP15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 MRPL24Q96A35 216 aaKnown RBP15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 KNL1Q8NG31 2342 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 AKAP11Q9UKA4 1901 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 K7N7A8 449 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 FOXS1O43638 330 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 ZNF253O75346 499 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 SRSF10O75494 262 aaKnown RBP15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 ROM1Q03395 351 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 SEZ6L2Q6UXD5 910 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 HIGD1AQ9Y241 93 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 LOXL4Q96JB6 756 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 LRP5O75197 1615 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 A0A1B0GU03 582 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 OR4C45A6NMZ5 311 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 TTRP02766 147 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 PSG2P11465 335 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 PPP1CCP36873 323 aaKnown RBP15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 DLX1P56177 255 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 HLA-DRB5Q30154 266 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 LRP11Q86VZ4 500 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 DYRK2Q92630 601 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 MARVELD1Q9BSK0 173 aa15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 ZMAT5Q9UDW3 170 aaKnown RBP15.86■□□□□ 0.13
SFSWAP-203ENST00000535236 DEDDO75618 318 aa15.85■□□□□ 0.13
SFSWAP-203ENST00000535236 ELOBQ15370 118 aa15.85■□□□□ 0.13
SFSWAP-203ENST00000535236 OR1L6Q8NGR2 347 aa15.85■□□□□ 0.13
SFSWAP-203ENST00000535236 PARP11Q9NR21 331 aa15.85■□□□□ 0.13
SFSWAP-203ENST00000535236 PRSS50Q9UI38 385 aa15.85■□□□□ 0.13
SFSWAP-203ENST00000535236 RAB29O14966 203 aa15.85■□□□□ 0.13
SFSWAP-203ENST00000535236 ZNF501Q96CX3 271 aaPredicted RBP15.85■□□□□ 0.13
SFSWAP-203ENST00000535236 MAP1LC3CQ9BXW4 147 aa15.85■□□□□ 0.13
SFSWAP-203ENST00000535236 HELTA6NFD8 242 aa15.85■□□□□ 0.13
SFSWAP-203ENST00000535236 SMPD2O60906 423 aa15.85■□□□□ 0.13
SFSWAP-203ENST00000535236 WNT5AP41221 380 aa15.85■□□□□ 0.13
SFSWAP-203ENST00000535236 SMAGPQ0VAQ4 97 aa15.85■□□□□ 0.13
SFSWAP-203ENST00000535236 MGAT2Q10469 447 aa15.85■□□□□ 0.13
SFSWAP-203ENST00000535236 SLC35E3Q7Z769 313 aa15.85■□□□□ 0.13
SFSWAP-203ENST00000535236 PGLYRP3Q96LB9 341 aa15.85■□□□□ 0.13
SFSWAP-203ENST00000535236 CCL13Q99616 98 aa15.85■□□□□ 0.13
SFSWAP-203ENST00000535236 VAX2Q9UIW0 290 aa15.85■□□□□ 0.13
SFSWAP-203ENST00000535236 NKX2-6A6NCS4 301 aa15.85■□□□□ 0.13
SFSWAP-203ENST00000535236 CRHP06850 196 aa15.85■□□□□ 0.13
SFSWAP-203ENST00000535236 PEBP1P30086 187 aaKnown RBP15.85■□□□□ 0.13
SFSWAP-203ENST00000535236 CDRT15L2A8MXV6 281 aa15.84■□□□□ 0.13
SFSWAP-203ENST00000535236 CXorf1O96002 111 aa15.84■□□□□ 0.13
SFSWAP-203ENST00000535236 GUCA2BQ16661 112 aa15.84■□□□□ 0.13
SFSWAP-203ENST00000535236 FAM214BQ7L5A3 538 aa15.84■□□□□ 0.13
SFSWAP-203ENST00000535236 HILPDAQ9Y5L2 63 aa15.84■□□□□ 0.13
SFSWAP-203ENST00000535236 P2RY6Q15077 328 aa15.84■□□□□ 0.13
SFSWAP-203ENST00000535236 PLPPR5Q32ZL2 321 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms