RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 STPG2Q8N412 459 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 DRAM1Q8N682 238 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 PACRGLQ8N7B6 248 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 TMEM217Q8N7C4 229 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF676Q8N7Q3 588 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 CNIH3Q8TBE1 160 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 CASTOR1Q8WTX7 329 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 CHPT1Q8WUD6 406 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 OR5P3Q8WZ94 311 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 PIGCQ92535 297 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 BPIFA2Q96DR5 249 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF799Q96GE5 643 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 CENPNQ96H22 339 aaPredicted RBP2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 HOPXQ9BPY8 73 aaPredicted RBP2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 ANKRD60Q9BZ19 345 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 HDHD2Q9H0R4 259 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 DNTTIP1Q9H147 329 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 TLNRD1Q9H1K6 362 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 FN3KQ9H479 309 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 TUBA4BQ9H853 241 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 HMG20AQ9NP66 347 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 EXOSC4Q9NPD3 245 aaKnown RBP2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 MRGBPQ9NV56 204 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 MRPL22Q9NWU5 206 aaKnown RBP2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 THUMPD1Q9NXG2 353 aaKnown RBP2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 SCN3BQ9NY72 215 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 USE1Q9NZ43 259 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 OR14J1Q9UGF5 321 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 MED31Q9Y3C7 131 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 TBL2Q9Y4P3 447 aaKnown RBP2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 GMPPBQ9Y5P6 360 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 SELENOKQ9Y6D0 94 aa2.25□□□□□ -2.05
CHMP4A-208ENST00000534106 IGHV3-72A0A0B4J1Y9 119 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 FUOMA2VDF0 154 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 HTR3EA5X5Y0 456 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 IZUMO1RA6ND01 250 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 ARRDC5A6NEK1 342 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 GAGE12JA6NER3 117 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 A8MZ25 164 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 EFCAB9A8MZ26 197 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 F8VVB4 439 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 F8VWA3 439 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 G3V318 75 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 LY6LH3BQJ8 138 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 I3L521 148 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 SLC1A7O00341 560 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 CCRL2O00421 344 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 CXCR6O00574 342 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 XKRYO14609 159 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 FFAR1O14842 300 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 IDH3BO43837 385 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 MITFO75030 526 aaPredicted RBP2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 TSC22D2O75157 780 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 DIRAS1O95057 198 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 IGHG2P01859 326 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 APOA1P02647 267 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 KRT8P05787 483 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 CD14P08571 375 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 CALCBP10092 127 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 NR2C1P13056 603 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 HSD17B1P14061 328 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 GPX2P18283 190 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 PRKACGP22612 351 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 ACKR3P25106 362 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 DCKP27707 260 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 HTR1DP28221 377 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 CD40LGP29965 261 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 BRS3P32247 399 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 DCTDP32321 178 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 PYCR1P32322 319 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 S100A5P33763 92 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 RCVRNP35243 200 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 GPR4P46093 362 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 INPP1P49441 399 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 INSL3P51460 131 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 ALDH3A2P51648 485 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 NKX2-5P52952 324 aaPredicted RBP2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 EDDM3BP56851 147 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 FXYD6P3P58550 94 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 KRTAP10-5P60370 271 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 VBP1P61758 197 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 SLC35B1P78383 322 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 SPIBQ01892 262 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 MZT1Q08AG7 82 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 PRDX4Q13162 271 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 GPR50Q13585 617 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 KRR1Q13601 381 aaKnown RBP2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 RBM39Q14498 530 aaKnown RBP2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 EDDM3AQ14507 147 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 SLC36A3Q495N2 470 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 RBM48Q5RL73 367 aaKnown RBP2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 C6orf183Q5T699 404 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 MINOS1Q5TGZ0 78 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 PRAMEF5Q5TYX0 476 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 TTC23Q5W5X9 447 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 TEX38Q6PEX7 206 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 HACD2Q6Y1H2 254 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 LINC00322Q6ZN03 302 aaPredicted RBP2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 AHSA2Q719I0 299 aa2.24□□□□□ -2.05
CHMP4A-208ENST00000534106 C16orf82Q7Z2V1 217 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms