RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 CEACAM21Q3KPI0 293 aa15.26■□□□□ 0.03
PHRF1-205ENST00000533464 STPG1Q5TH74 334 aa15.26■□□□□ 0.03
PHRF1-205ENST00000533464 GAR1Q9NY12 217 aaKnown RBP15.26■□□□□ 0.03
PHRF1-205ENST00000533464 PRRX1P54821 245 aa15.26■□□□□ 0.03
PHRF1-205ENST00000533464 FAM214BQ7L5A3 538 aa15.26■□□□□ 0.03
PHRF1-205ENST00000533464 FAM181AQ8N9Y4 354 aa15.26■□□□□ 0.03
PHRF1-205ENST00000533464 TMEM37Q8WXS4 190 aa15.26■□□□□ 0.03
PHRF1-205ENST00000533464 ZNF586Q9NXT0 402 aa15.26■□□□□ 0.03
PHRF1-205ENST00000533464 POMT1Q9Y6A1 747 aa15.26■□□□□ 0.03
PHRF1-205ENST00000533464 TGFBR3LH3BV60 316 aa15.26■□□□□ 0.03
PHRF1-205ENST00000533464 RNF212Q495C1 297 aa15.26■□□□□ 0.03
PHRF1-205ENST00000533464 ZNF66Q6ZN08 573 aa15.26■□□□□ 0.03
PHRF1-205ENST00000533464 TMEM210A6NLX4 147 aa15.25■□□□□ 0.03
PHRF1-205ENST00000533464 DBX1A6NMT0 343 aa15.25■□□□□ 0.03
PHRF1-205ENST00000533464 KCNAB3O43448 404 aa15.25■□□□□ 0.03
PHRF1-205ENST00000533464 LOXL4Q96JB6 756 aa15.25■□□□□ 0.03
PHRF1-205ENST00000533464 A0A1W2PN81 502 aa15.25■□□□□ 0.03
PHRF1-205ENST00000533464 XKRY2A2RUG3 117 aa15.25■□□□□ 0.03
PHRF1-205ENST00000533464 FTH1P19P0C7X4 201 aa15.25■□□□□ 0.03
PHRF1-205ENST00000533464 RD3LP0DJH9 198 aa15.25■□□□□ 0.03
PHRF1-205ENST00000533464 PSG2P11465 335 aa15.25■□□□□ 0.03
PHRF1-205ENST00000533464 HLA-GP17693 338 aa15.25■□□□□ 0.03
PHRF1-205ENST00000533464 CHRNA7P36544 502 aa15.25■□□□□ 0.03
PHRF1-205ENST00000533464 APCDD1LQ8NCL9 501 aa15.25■□□□□ 0.03
PHRF1-205ENST00000533464 SHISA3A0PJX4 238 aa15.25■□□□□ 0.03
PHRF1-205ENST00000533464 LINC00596Q86U02 117 aa15.25■□□□□ 0.03
PHRF1-205ENST00000533464 LINC00862A6NCI5 91 aa15.25■□□□□ 0.03
PHRF1-205ENST00000533464 CXCL2P19875 107 aa15.25■□□□□ 0.03
PHRF1-205ENST00000533464 TMEM50BP56557 158 aa15.25■□□□□ 0.03
PHRF1-205ENST00000533464 TIPARPQ7Z3E1 657 aaKnown RBP15.25■□□□□ 0.03
PHRF1-205ENST00000533464 DOK5Q9P104 306 aa15.25■□□□□ 0.03
PHRF1-205ENST00000533464 OR5I1Q13606 314 aa15.24■□□□□ 0.03
PHRF1-205ENST00000533464 IGSF11Q5DX21 431 aa15.24■□□□□ 0.03
PHRF1-205ENST00000533464 CDCP2Q5VXM1 449 aa15.24■□□□□ 0.03
PHRF1-205ENST00000533464 ETFRF1Q6IPR1 90 aa15.24■□□□□ 0.03
PHRF1-205ENST00000533464 RAB1CQ92928 201 aa15.24■□□□□ 0.03
PHRF1-205ENST00000533464 G6PC2Q9NQR9 355 aa15.24■□□□□ 0.03
PHRF1-205ENST00000533464 RIF1Q5UIP0 2472 aaKnown RBP15.24■□□□□ 0.03
PHRF1-205ENST00000533464 G6PCP35575 357 aa15.24■□□□□ 0.03
PHRF1-205ENST00000533464 SNAI3Q3KNW1 292 aa15.24■□□□□ 0.03
PHRF1-205ENST00000533464 FNDC7Q5VTL7 733 aa15.24■□□□□ 0.03
PHRF1-205ENST00000533464 RAB1BQ9H0U4 201 aa15.24■□□□□ 0.03
PHRF1-205ENST00000533464 RCC2Q9P258 522 aaKnown RBP15.24■□□□□ 0.03
PHRF1-205ENST00000533464 NPIPB9F8W1W9 429 aa15.24■□□□□ 0.03
PHRF1-205ENST00000533464 C16orf97H3BN30 126 aa15.24■□□□□ 0.03
PHRF1-205ENST00000533464 SULT1A1P50225 295 aa15.24■□□□□ 0.03
PHRF1-205ENST00000533464 ZNF345Q14585 488 aa15.24■□□□□ 0.03
PHRF1-205ENST00000533464 ELF5Q9UKW6 265 aaPredicted RBP15.24■□□□□ 0.03
PHRF1-205ENST00000533464 IGHV3OR15-7A0A075B7D8 119 aa15.24■□□□□ 0.03
PHRF1-205ENST00000533464 SPP1P10451 314 aa15.24■□□□□ 0.03
PHRF1-205ENST00000533464 FGF12P61328 243 aa15.24■□□□□ 0.03
PHRF1-205ENST00000533464 Q9N2K0 584 aa15.24■□□□□ 0.03
PHRF1-205ENST00000533464 SH2D2AQ9NP31 389 aa15.24■□□□□ 0.03
PHRF1-205ENST00000533464 A0A1W2PRD5 423 aa15.23■□□□□ 0.03
PHRF1-205ENST00000533464 A0A1W2PRF3 423 aa15.23■□□□□ 0.03
PHRF1-205ENST00000533464 A0A1W2PRM7 423 aa15.23■□□□□ 0.03
PHRF1-205ENST00000533464 MBPP02686 304 aaPredicted RBP15.23■□□□□ 0.03
PHRF1-205ENST00000533464 UCP2P55851 309 aa15.23■□□□□ 0.03
PHRF1-205ENST00000533464 Q56UQ5 140 aa15.23■□□□□ 0.03
PHRF1-205ENST00000533464 TPRX1Q8N7U7 411 aa15.23■□□□□ 0.03
PHRF1-205ENST00000533464 VSTM2AQ8TAG5 236 aa15.23■□□□□ 0.03
PHRF1-205ENST00000533464 SEBOXQ9HB31 216 aaPredicted RBP15.23■□□□□ 0.03
PHRF1-205ENST00000533464 PRSS50Q9UI38 385 aa15.23■□□□□ 0.03
PHRF1-205ENST00000533464 GPR132Q9UNW8 380 aa15.23■□□□□ 0.03
PHRF1-205ENST00000533464 PPP1CCP36873 323 aaKnown RBP15.23■□□□□ 0.03
PHRF1-205ENST00000533464 RIPPLY2Q5TAB7 128 aa15.23■□□□□ 0.03
PHRF1-205ENST00000533464 ZNF665Q9H7R5 613 aa15.23■□□□□ 0.03
PHRF1-205ENST00000533464 A0A1B0GU03 582 aa15.23■□□□□ 0.03
PHRF1-205ENST00000533464 IL17BQ9UHF5 180 aa15.23■□□□□ 0.03
PHRF1-205ENST00000533464 SLC23A3Q6PIS1 610 aa15.23■□□□□ 0.03
PHRF1-205ENST00000533464 TMEM229AB2RXF0 380 aa15.22■□□□□ 0.03
PHRF1-205ENST00000533464 GALR1P47211 349 aa15.22■□□□□ 0.03
PHRF1-205ENST00000533464 SNRPEP62304 92 aaKnown RBP15.22■□□□□ 0.03
PHRF1-205ENST00000533464 PAX5Q02548 391 aa15.22■□□□□ 0.03
PHRF1-205ENST00000533464 HSD17B10Q99714 261 aaKnown RBP15.22■□□□□ 0.03
PHRF1-205ENST00000533464 SRXN1Q9BYN0 137 aa15.22■□□□□ 0.03
PHRF1-205ENST00000533464 OTOFQ9HC10 1997 aa15.22■□□□□ 0.03
PHRF1-205ENST00000533464 FDX2Q6P4F2 183 aa15.22■□□□□ 0.03
PHRF1-205ENST00000533464 LYPD8Q6UX82 237 aa15.22■□□□□ 0.03
PHRF1-205ENST00000533464 TRAPPC1Q9Y5R8 145 aa15.22■□□□□ 0.03
PHRF1-205ENST00000533464 SPINK4O60575 86 aa15.22■□□□□ 0.03
PHRF1-205ENST00000533464 GABRA6Q16445 453 aa15.22■□□□□ 0.03
PHRF1-205ENST00000533464 AWAT1Q58HT5 328 aa15.22■□□□□ 0.03
PHRF1-205ENST00000533464 ZBTB34Q8NCN2 500 aa15.22■□□□□ 0.03
PHRF1-205ENST00000533464 OR1K1Q8NGR3 316 aa15.22■□□□□ 0.03
PHRF1-205ENST00000533464 WDR90Q96KV7 1748 aa15.22■□□□□ 0.03
PHRF1-205ENST00000533464 IGKV3D-11A0A0A0MRZ8 115 aa15.22■□□□□ 0.03
PHRF1-205ENST00000533464 EFEMP2O95967 443 aa15.22■□□□□ 0.03
PHRF1-205ENST00000533464 IGLV3-19P01714 112 aa15.22■□□□□ 0.03
PHRF1-205ENST00000533464 ARG1P05089 322 aa15.22■□□□□ 0.03
PHRF1-205ENST00000533464 TMEM65Q6PI78 240 aa15.22■□□□□ 0.03
PHRF1-205ENST00000533464 AQP3Q92482 292 aa15.22■□□□□ 0.03
PHRF1-205ENST00000533464 FAM210BQ96KR6 192 aa15.22■□□□□ 0.03
PHRF1-205ENST00000533464 TOLLIPQ9H0E2 274 aa15.22■□□□□ 0.03
PHRF1-205ENST00000533464 AKIRIN1Q9H9L7 192 aaPredicted RBP15.22■□□□□ 0.03
PHRF1-205ENST00000533464 FAM157AC9JC47 383 aa15.21■□□□□ 0.03
PHRF1-205ENST00000533464 SLC25A5P05141 298 aaKnown RBP15.21■□□□□ 0.03
PHRF1-205ENST00000533464 PRF1P14222 555 aa15.21■□□□□ 0.03
PHRF1-205ENST00000533464 TNXAQ16473 311 aa15.21■□□□□ 0.03
PHRF1-205ENST00000533464 BCL2L2Q92843 193 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms