RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 MDS2Q8NDY4 140 aa15.4■□□□□ 0.06
UBXN1-213ENST00000532904 OR5C1Q8NGR4 320 aa15.4■□□□□ 0.06
UBXN1-213ENST00000532904 EXTL1Q92935 676 aa15.4■□□□□ 0.06
UBXN1-213ENST00000532904 TMEM45BQ96B21 275 aa15.4■□□□□ 0.06
UBXN1-213ENST00000532904 ALKBH3Q96Q83 286 aaPredicted RBP15.4■□□□□ 0.06
UBXN1-213ENST00000532904 TTTY12Q9BZ98 90 aa15.4■□□□□ 0.06
UBXN1-213ENST00000532904 CEACAM1P13688 526 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 NPBWR2P48146 333 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 LHX2P50458 406 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 DYNLT3P51808 116 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 ID3Q02535 119 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 BAXQ07812 192 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 KIAA0141Q14154 515 aaPredicted RBP15.39■□□□□ 0.05
UBXN1-213ENST00000532904 ICAM4Q14773 271 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 HAGHQ16775 308 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 NMSQ5H8A3 153 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 NCMAPQ5T1S8 102 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 SLC25A26Q70HW3 274 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 EDARADDQ8WWZ3 215 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 SPSB4Q96A44 273 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 MAGT1Q9H0U3 335 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 HIPK2Q9H2X6 1198 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 Q9N2K0 584 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 PARPBPQ9NWS1 579 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 SHANK1Q9Y566 2161 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 IGKV3D-15A0A087WSY6 115 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 SCAF4O95104 1147 aaKnown RBP15.39■□□□□ 0.05
UBXN1-213ENST00000532904 HSPB1P04792 205 aaKnown RBP15.39■□□□□ 0.05
UBXN1-213ENST00000532904 EDN3P14138 238 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 RPS10P46783 165 aaKnown RBP15.39■□□□□ 0.05
UBXN1-213ENST00000532904 SPIN3Q5JUX0 258 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 ZNF506Q5JVG8 444 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 ZNF818PQ6ZRF7 136 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 LINC00696Q6ZRV3 163 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 LIPGQ9Y5X9 500 aa15.39■□□□□ 0.05
UBXN1-213ENST00000532904 ZNF587BE7ETH6 402 aa15.38■□□□□ 0.05
UBXN1-213ENST00000532904 TK1P04183 234 aa15.38■□□□□ 0.05
UBXN1-213ENST00000532904 SP1P08047 785 aa15.38■□□□□ 0.05
UBXN1-213ENST00000532904 UCP1P25874 307 aa15.38■□□□□ 0.05
UBXN1-213ENST00000532904 TAGLN2P37802 199 aaKnown RBP15.38■□□□□ 0.05
UBXN1-213ENST00000532904 UBE2KP61086 200 aa15.38■□□□□ 0.05
UBXN1-213ENST00000532904 CEACAM16Q2WEN9 425 aa15.38■□□□□ 0.05
UBXN1-213ENST00000532904 IGF2-ASQ6U949 168 aa15.38■□□□□ 0.05
UBXN1-213ENST00000532904 PLPPR1Q8TBJ4 325 aa15.38■□□□□ 0.05
UBXN1-213ENST00000532904 HES7Q9BYE0 225 aa15.38■□□□□ 0.05
UBXN1-213ENST00000532904 PLA2G3Q9NZ20 509 aa15.38■□□□□ 0.05
UBXN1-213ENST00000532904 ZNF727A8MUV8 499 aa15.37■□□□□ 0.05
UBXN1-213ENST00000532904 KLRC4-KLRK1H3BQV0 150 aa15.37■□□□□ 0.05
UBXN1-213ENST00000532904 TMEM50AO95807 157 aa15.37■□□□□ 0.05
UBXN1-213ENST00000532904 NAPSAO96009 420 aa15.37■□□□□ 0.05
UBXN1-213ENST00000532904 EPHA1P21709 976 aa15.37■□□□□ 0.05
UBXN1-213ENST00000532904 CLDN18P56856 261 aa15.37■□□□□ 0.05
UBXN1-213ENST00000532904 ZNF429Q86V71 674 aa15.37■□□□□ 0.05
UBXN1-213ENST00000532904 GAPTQ8N292 157 aa15.37■□□□□ 0.05
UBXN1-213ENST00000532904 C1QTNF5Q9BXJ0 243 aa15.37■□□□□ 0.05
UBXN1-213ENST00000532904 TOLLIPQ9H0E2 274 aa15.37■□□□□ 0.05
UBXN1-213ENST00000532904 TINAGQ9UJW2 476 aa15.37■□□□□ 0.05
UBXN1-213ENST00000532904 SLC22A20A6NK97 555 aa15.37■□□□□ 0.05
UBXN1-213ENST00000532904 TUSC2O75896 110 aa15.37■□□□□ 0.05
UBXN1-213ENST00000532904 CST7O76096 145 aa15.37■□□□□ 0.05
UBXN1-213ENST00000532904 FBP1P09467 338 aa15.37■□□□□ 0.05
UBXN1-213ENST00000532904 VDAC1P21796 283 aa15.37■□□□□ 0.05
UBXN1-213ENST00000532904 RAB2AP61019 212 aa15.37■□□□□ 0.05
UBXN1-213ENST00000532904 DPPA3Q6W0C5 159 aa15.37■□□□□ 0.05
UBXN1-213ENST00000532904 TMEM251Q8N6I4 163 aa15.37■□□□□ 0.05
UBXN1-213ENST00000532904 GGACTQ9BVM4 153 aa15.37■□□□□ 0.05
UBXN1-213ENST00000532904 GPR35Q9HC97 309 aa15.37■□□□□ 0.05
UBXN1-213ENST00000532904 MMP24Q9Y5R2 645 aa15.37■□□□□ 0.05
UBXN1-213ENST00000532904 CXorf65A6NEN9 183 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 H0YL77 283 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 MMP7P09237 267 aaPredicted RBP15.36■□□□□ 0.05
UBXN1-213ENST00000532904 CDX1P47902 265 aaPredicted RBP15.36■□□□□ 0.05
UBXN1-213ENST00000532904 DLK1P80370 383 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 ELOBQ15370 118 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 AKR1C8PQ5T2L2 129 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 BATF2Q8N1L9 274 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 Q8WTZ3 238 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 IL22RA2Q969J5 263 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 RBMXL1Q96E39 390 aaKnown RBP15.36■□□□□ 0.05
UBXN1-213ENST00000532904 TVP23CQ96ET8 276 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 ZNF845Q96IR2 970 aaPredicted RBP15.36■□□□□ 0.05
UBXN1-213ENST00000532904 PRDM14Q9GZV8 571 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 SIRT7Q9NRC8 400 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 IGKV1D-13A0A0B4J2D9 117 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 SPAARA0A1B0GVQ0 90 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 HBE1P02100 147 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 SCTP09683 121 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 IGKV1-13P0DP09 117 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 BCL3P20749 454 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 MAGEA5P43359 124 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 NRN1LQ496H8 165 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 C5orf24Q7Z6I8 188 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 CYB561D1Q8N8Q1 229 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 CLDND2Q8NHS1 167 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 ATP5SQ99766 215 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 ASCL3Q9NQ33 180 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 WSB1Q9Y6I7 421 aa15.36■□□□□ 0.05
UBXN1-213ENST00000532904 IFITM10A6NMD0 228 aa15.35■□□□□ 0.05
UBXN1-213ENST00000532904 CHST1O43916 411 aa15.35■□□□□ 0.05
UBXN1-213ENST00000532904 YIF1AO95070 293 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms