RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 LIAT1Q6ZQX7 453 aa12.82□□□□□ -0.36
SRPRA-206ENST00000532259 Q8IYB0 196 aa12.82□□□□□ -0.36
SRPRA-206ENST00000532259 POM121Q96HA1 1249 aa12.82□□□□□ -0.36
SRPRA-206ENST00000532259 DHRS9Q9BPW9 319 aa12.82□□□□□ -0.36
SRPRA-206ENST00000532259 TREM2Q9NZC2 230 aa12.82□□□□□ -0.36
SRPRA-206ENST00000532259 UBE2J1Q9Y385 318 aaPredicted RBP12.82□□□□□ -0.36
SRPRA-206ENST00000532259 POLEQ07864 2286 aa12.82□□□□□ -0.36
SRPRA-206ENST00000532259 SPRY3O43610 288 aa12.82□□□□□ -0.36
SRPRA-206ENST00000532259 OR51H1Q8NH63 302 aa12.82□□□□□ -0.36
SRPRA-206ENST00000532259 ARPC5LQ9BPX5 153 aa12.82□□□□□ -0.36
SRPRA-206ENST00000532259 SFXN3Q9BWM7 321 aa12.82□□□□□ -0.36
SRPRA-206ENST00000532259 FBXO9Q9UK97 447 aaPredicted RBP12.82□□□□□ -0.36
SRPRA-206ENST00000532259 ZSCAN5BA6NJL1 495 aa12.81□□□□□ -0.36
SRPRA-206ENST00000532259 TMEM210A6NLX4 147 aa12.81□□□□□ -0.36
SRPRA-206ENST00000532259 SNAPC5O75971 98 aa12.81□□□□□ -0.36
SRPRA-206ENST00000532259 ZNF250P15622 560 aa12.81□□□□□ -0.36
SRPRA-206ENST00000532259 IL15RAQ13261 267 aa12.81□□□□□ -0.36
SRPRA-206ENST00000532259 ZNF146Q15072 292 aa12.81□□□□□ -0.36
SRPRA-206ENST00000532259 TOR2AQ5JU69 321 aa12.81□□□□□ -0.36
SRPRA-206ENST00000532259 Q6ZS49 121 aa12.81□□□□□ -0.36
SRPRA-206ENST00000532259 CCDC71LQ8N9Z2 235 aa12.81□□□□□ -0.36
SRPRA-206ENST00000532259 GALNT14Q96FL9 552 aa12.81□□□□□ -0.36
SRPRA-206ENST00000532259 SMIM3Q9BZL3 60 aa12.81□□□□□ -0.36
SRPRA-206ENST00000532259 MEMO1Q9Y316 297 aa12.81□□□□□ -0.36
SRPRA-206ENST00000532259 RBM7Q9Y580 266 aaKnown RBP12.81□□□□□ -0.36
SRPRA-206ENST00000532259 ATXN7O15265 892 aaPredicted RBP12.81□□□□□ -0.36
SRPRA-206ENST00000532259 UCP3P55916 312 aa12.81□□□□□ -0.36
SRPRA-206ENST00000532259 UBA52P62987 128 aaKnown RBP12.81□□□□□ -0.36
SRPRA-206ENST00000532259 MBNL2Q5VZF2 373 aaKnown RBP12.81□□□□□ -0.36
SRPRA-206ENST00000532259 ZNF497Q6ZNH5 498 aa12.81□□□□□ -0.36
SRPRA-206ENST00000532259 LRRC29Q8WV35 223 aa12.81□□□□□ -0.36
SRPRA-206ENST00000532259 SLX1AQ9BQ83 275 aa12.81□□□□□ -0.36
SRPRA-206ENST00000532259 RIMS4Q9H426 269 aaPredicted RBP12.81□□□□□ -0.36
SRPRA-206ENST00000532259 IGHV3OR15-7A0A075B7D8 119 aa12.8□□□□□ -0.36
SRPRA-206ENST00000532259 TPD52L2O43399 206 aaKnown RBP12.8□□□□□ -0.36
SRPRA-206ENST00000532259 MBPP02686 304 aaPredicted RBP12.8□□□□□ -0.36
SRPRA-206ENST00000532259 RRASP10301 218 aa12.8□□□□□ -0.36
SRPRA-206ENST00000532259 KCNJ3P48549 501 aa12.8□□□□□ -0.36
SRPRA-206ENST00000532259 SNTB1Q13884 538 aaKnown RBP12.8□□□□□ -0.36
SRPRA-206ENST00000532259 LGI3Q8N145 548 aa12.8□□□□□ -0.36
SRPRA-206ENST00000532259 CNTNAP3BQ96NU0 1288 aa12.8□□□□□ -0.36
SRPRA-206ENST00000532259 USB1Q9BQ65 265 aaKnown RBP12.8□□□□□ -0.36
SRPRA-206ENST00000532259 SUCNR1Q9BXA5 334 aa12.8□□□□□ -0.36
SRPRA-206ENST00000532259 CNTNAP3Q9BZ76 1288 aa12.8□□□□□ -0.36
SRPRA-206ENST00000532259 TAF9BQ9HBM6 251 aa12.8□□□□□ -0.36
SRPRA-206ENST00000532259 TAAR3PQ9P1P4 343 aa12.8□□□□□ -0.36
SRPRA-206ENST00000532259 LRBAP50851 2863 aa12.8□□□□□ -0.36
SRPRA-206ENST00000532259 TRBV6-7A0A0A0MS04 114 aa12.8□□□□□ -0.36
SRPRA-206ENST00000532259 GPR31O00270 319 aa12.8□□□□□ -0.36
SRPRA-206ENST00000532259 TUSC2O75896 110 aa12.8□□□□□ -0.36
SRPRA-206ENST00000532259 EGR1P18146 543 aa12.8□□□□□ -0.36
SRPRA-206ENST00000532259 NUP62P37198 522 aaPredicted RBP12.8□□□□□ -0.36
SRPRA-206ENST00000532259 ACP7Q6ZNF0 438 aa12.8□□□□□ -0.36
SRPRA-206ENST00000532259 C18orf12Q96KH6 178 aa12.8□□□□□ -0.36
SRPRA-206ENST00000532259 KIF25Q9UIL4 384 aa12.8□□□□□ -0.36
SRPRA-206ENST00000532259 PPP1R3CQ9UQK1 317 aa12.8□□□□□ -0.36
SRPRA-206ENST00000532259 GABRA2P47869 451 aa12.79□□□□□ -0.36
SRPRA-206ENST00000532259 FAM201AQ5SY85 155 aa12.79□□□□□ -0.36
SRPRA-206ENST00000532259 WFDC8Q8IUA0 241 aa12.79□□□□□ -0.36
SRPRA-206ENST00000532259 ZNF695Q8IW36 515 aa12.79□□□□□ -0.36
SRPRA-206ENST00000532259 OR4A4PQ8NGN8 299 aa12.79□□□□□ -0.36
SRPRA-206ENST00000532259 IFT22Q9H7X7 185 aa12.79□□□□□ -0.36
SRPRA-206ENST00000532259 HES4Q9HCC6 221 aa12.79□□□□□ -0.36
SRPRA-206ENST00000532259 KCNS2Q9ULS6 477 aa12.79□□□□□ -0.36
SRPRA-206ENST00000532259 OR2W1Q9Y3N9 320 aa12.79□□□□□ -0.36
SRPRA-206ENST00000532259 NKX2-6A6NCS4 301 aa12.79□□□□□ -0.36
SRPRA-206ENST00000532259 LGALS8O00214 317 aa12.79□□□□□ -0.36
SRPRA-206ENST00000532259 OR8U9P0C7N5 309 aa12.79□□□□□ -0.36
SRPRA-206ENST00000532259 ZNF16P17020 682 aaPredicted RBP12.79□□□□□ -0.36
SRPRA-206ENST00000532259 COL10A1Q03692 680 aa12.79□□□□□ -0.36
SRPRA-206ENST00000532259 EDDM3AQ14507 147 aa12.79□□□□□ -0.36
SRPRA-206ENST00000532259 AANATQ16613 207 aa12.79□□□□□ -0.36
SRPRA-206ENST00000532259 ZNF880Q6PDB4 577 aa12.79□□□□□ -0.36
SRPRA-206ENST00000532259 FIP1L1Q6UN15 594 aaKnown RBP12.79□□□□□ -0.36
SRPRA-206ENST00000532259 OR8U1Q8NH10 309 aa12.79□□□□□ -0.36
SRPRA-206ENST00000532259 OR1L1Q8NH94 360 aa12.79□□□□□ -0.36
SRPRA-206ENST00000532259 OR2V2Q96R30 315 aa12.79□□□□□ -0.36
SRPRA-206ENST00000532259 DCTN5Q9BTE1 182 aa12.79□□□□□ -0.36
SRPRA-206ENST00000532259 CTXN2P0C2S0 81 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 PET100P0DJ07 73 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 CEACAM6P40199 344 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 OR3A1P47881 315 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 SRSF7Q16629 238 aaKnown RBP eCLIP12.78□□□□□ -0.36
SRPRA-206ENST00000532259 LTC4SQ16873 150 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 IZUMO4Q1ZYL8 232 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 MOGAT3Q86VF5 341 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 PDZD9Q8IXQ8 264 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 MRGPRDQ8TDS7 321 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 TMEM171Q8WVE6 324 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 TMED6Q8WW62 240 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 PLPPR2Q96GM1 343 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 TMEM222Q9H0R3 208 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 RNF150Q9ULK6 438 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 PCDHB10Q9UN67 800 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 USF3Q68DE3 2245 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 PIEZO1Q92508 2521 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 PGLYRP1O75594 196 aaPredicted RBP12.78□□□□□ -0.36
SRPRA-206ENST00000532259 GLIPR1P48060 266 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 KLF3P57682 345 aaPredicted RBP12.78□□□□□ -0.36
SRPRA-206ENST00000532259 NKX6-1P78426 367 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms