RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 MT-ND4P03905 459 aa11.83□□□□□ -0.52
CPSF1-206ENST00000531480 CD40LGP29965 261 aa11.83□□□□□ -0.52
CPSF1-206ENST00000531480 SRP14P37108 136 aaKnown RBP11.83□□□□□ -0.52
CPSF1-206ENST00000531480 C17orf58Q2M2W7 97 aa11.83□□□□□ -0.52
CPSF1-206ENST00000531480 NCR3LG1Q68D85 454 aa11.83□□□□□ -0.52
CPSF1-206ENST00000531480 BRICD5Q6PL45 260 aa11.83□□□□□ -0.52
CPSF1-206ENST00000531480 HEPN1Q6WQI6 88 aa11.83□□□□□ -0.52
CPSF1-206ENST00000531480 OR56B1Q8NGI3 324 aa11.83□□□□□ -0.52
CPSF1-206ENST00000531480 OR13A1Q8NGR1 328 aa11.83□□□□□ -0.52
CPSF1-206ENST00000531480 BORCS5Q969J3 196 aa11.83□□□□□ -0.52
CPSF1-206ENST00000531480 CYYR1Q96J86 154 aa11.83□□□□□ -0.52
CPSF1-206ENST00000531480 SULT4A1Q9BR01 284 aa11.83□□□□□ -0.52
CPSF1-206ENST00000531480 PRDM13Q9H4Q3 707 aa11.83□□□□□ -0.52
CPSF1-206ENST00000531480 MEIKINA0A087WXM9 373 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 IGHV1-69DA0A0B4J2H0 117 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 TMEM30CPA0ZSE6 113 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 ZNF729A6NN14 1252 aaPredicted RBP11.82□□□□□ -0.52
CPSF1-206ENST00000531480 POM121CA8CG34 1229 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 NPIPB11E5RHQ5 1161 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 SOCS1O15524 211 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 NAPSAO96009 420 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 IGHV1-69P01742 117 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 IGHV1-8P0DP01 117 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 EPHA1P21709 976 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 BLVRBP30043 206 aaPredicted RBP11.82□□□□□ -0.52
CPSF1-206ENST00000531480 ETV6P41212 452 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 UBE2E1P51965 193 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 ERVFRD-1P60508 538 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 GUCA2AQ02747 115 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 SCGB2A2Q13296 93 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 PLAC9Q5JTB6 97 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 GPR157Q5UAW9 335 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 C6orf201Q7Z4U5 140 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 SAMD12Q8N8I0 201 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 ZNF565Q8N9K5 539 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 ZFAND2BQ8WV99 257 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 DYRK2Q92630 601 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 NEDD4LQ96PU5 975 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 GAL3ST2Q9H3Q3 398 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 SIRT7Q9NRC8 400 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 MBNL3Q9NUK0 354 aaKnown RBP11.82□□□□□ -0.52
CPSF1-206ENST00000531480 ETAA1Q9NY74 926 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 ZNF69Q9UC07 566 aa11.82□□□□□ -0.52
CPSF1-206ENST00000531480 A0A087X0M5 115 aa11.81□□□□□ -0.52
CPSF1-206ENST00000531480 TRBV6-6A0A0A6YYG2 114 aa11.81□□□□□ -0.52
CPSF1-206ENST00000531480 KBTBD11-OT1A0A1B0GTJ5 212 aa11.81□□□□□ -0.52
CPSF1-206ENST00000531480 A0A1B0GX30 115 aa11.81□□□□□ -0.52
CPSF1-206ENST00000531480 PAHP00439 452 aa11.81□□□□□ -0.52
CPSF1-206ENST00000531480 SNRPBP14678 240 aaKnown RBP11.81□□□□□ -0.52
CPSF1-206ENST00000531480 GZMHP20718 246 aa11.81□□□□□ -0.52
CPSF1-206ENST00000531480 TNFSF8P32971 234 aa11.81□□□□□ -0.52
CPSF1-206ENST00000531480 VEGFCP49767 419 aa11.81□□□□□ -0.52
CPSF1-206ENST00000531480 PPP5CP53041 499 aa11.81□□□□□ -0.52
CPSF1-206ENST00000531480 DLX1P56177 255 aa11.81□□□□□ -0.52
CPSF1-206ENST00000531480 MRPS10P82664 201 aaKnown RBP11.81□□□□□ -0.52
CPSF1-206ENST00000531480 DCTN2Q13561 401 aaKnown RBP11.81□□□□□ -0.52
CPSF1-206ENST00000531480 C16orf87Q6PH81 154 aa11.81□□□□□ -0.52
CPSF1-206ENST00000531480 ZNF554Q86TJ5 538 aa11.81□□□□□ -0.52
CPSF1-206ENST00000531480 OR11H6Q8NGC7 330 aa11.81□□□□□ -0.52
CPSF1-206ENST00000531480 OR10A7Q8NGE5 316 aa11.81□□□□□ -0.52
CPSF1-206ENST00000531480 LGALS14Q8TCE9 139 aa11.81□□□□□ -0.52
CPSF1-206ENST00000531480 LHX4Q969G2 390 aa11.81□□□□□ -0.52
CPSF1-206ENST00000531480 SLC25A38Q96DW6 304 aa11.81□□□□□ -0.52
CPSF1-206ENST00000531480 MDFIQ99750 246 aa11.81□□□□□ -0.52
CPSF1-206ENST00000531480 FAAP24Q9BTP7 215 aa11.81□□□□□ -0.52
CPSF1-206ENST00000531480 CCDC32Q9BV29 185 aa11.81□□□□□ -0.52
CPSF1-206ENST00000531480 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.81□□□□□ -0.52
CPSF1-206ENST00000531480 KCNK7Q9Y2U2 307 aa11.81□□□□□ -0.52
CPSF1-206ENST00000531480 SESN1Q9Y6P5 492 aa11.81□□□□□ -0.52
CPSF1-206ENST00000531480 C15orf65H3BRN8 121 aa11.8□□□□□ -0.52
CPSF1-206ENST00000531480 ORC5O43913 435 aa11.8□□□□□ -0.52
CPSF1-206ENST00000531480 MMP23AO75900 390 aa11.8□□□□□ -0.52
CPSF1-206ENST00000531480 CD34P28906 385 aa11.8□□□□□ -0.52
CPSF1-206ENST00000531480 MOGAT2Q3SYC2 334 aa11.8□□□□□ -0.52
CPSF1-206ENST00000531480 PYHIN1Q6K0P9 492 aa11.8□□□□□ -0.52
CPSF1-206ENST00000531480 ZNF880Q6PDB4 577 aa11.8□□□□□ -0.52
CPSF1-206ENST00000531480 FAM131AQ6UXB0 335 aa11.8□□□□□ -0.52
CPSF1-206ENST00000531480 Q6ZPA2 131 aa11.8□□□□□ -0.52
CPSF1-206ENST00000531480 Q6ZTK2 550 aa11.8□□□□□ -0.52
CPSF1-206ENST00000531480 RTN4RL2Q86UN3 420 aa11.8□□□□□ -0.52
CPSF1-206ENST00000531480 PIP4P2Q8N4L2 257 aa11.8□□□□□ -0.52
CPSF1-206ENST00000531480 GDPD1Q8N9F7 314 aa11.8□□□□□ -0.52
CPSF1-206ENST00000531480 OR5H6Q8NGV6 325 aa11.8□□□□□ -0.52
CPSF1-206ENST00000531480 OR10R2Q8NGX6 335 aa11.8□□□□□ -0.52
CPSF1-206ENST00000531480 MRPL30Q8TCC3 161 aaKnown RBP11.8□□□□□ -0.52
CPSF1-206ENST00000531480 AJUBAQ96IF1 538 aa11.8□□□□□ -0.52
CPSF1-206ENST00000531480 ARHGAP5-AS1Q96IT6 56 aa11.8□□□□□ -0.52
CPSF1-206ENST00000531480 PECRQ9BY49 303 aa11.8□□□□□ -0.52
CPSF1-206ENST00000531480 ABCG5Q9H222 651 aa11.8□□□□□ -0.52
CPSF1-206ENST00000531480 HEXA-AS1Q9H8Q6 139 aa11.8□□□□□ -0.52
CPSF1-206ENST00000531480 PLEKHJ1Q9NW61 149 aa11.8□□□□□ -0.52
CPSF1-206ENST00000531480 CALYQ9NYX4 217 aa11.8□□□□□ -0.52
CPSF1-206ENST00000531480 MEX3AA1L020 520 aaKnown RBP11.79□□□□□ -0.52
CPSF1-206ENST00000531480 UBE2QL1A1L167 161 aa11.79□□□□□ -0.52
CPSF1-206ENST00000531480 ODF3BA8MYP8 253 aa11.79□□□□□ -0.52
CPSF1-206ENST00000531480 MFNGO00587 321 aa11.79□□□□□ -0.52
CPSF1-206ENST00000531480 CTDSP2O14595 271 aa11.79□□□□□ -0.52
CPSF1-206ENST00000531480 CDK2P24941 298 aa11.79□□□□□ -0.52
CPSF1-206ENST00000531480 GDNFP39905 211 aa11.79□□□□□ -0.52
CPSF1-206ENST00000531480 GLP1RP43220 463 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms