RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 ZNF816Q0VGE8 651 aaPredicted RBP12.49□□□□□ -0.41
CPSF1-205ENST00000531042 LINC00596Q86U02 117 aa12.49□□□□□ -0.41
CPSF1-205ENST00000531042 CHPT1Q8WUD6 406 aa12.49□□□□□ -0.41
CPSF1-205ENST00000531042 NOL4LQ96MY1 436 aaPredicted RBP12.49□□□□□ -0.41
CPSF1-205ENST00000531042 S100A13Q99584 98 aa12.49□□□□□ -0.41
CPSF1-205ENST00000531042 PAK1IP1Q9NWT1 392 aaPredicted RBP12.49□□□□□ -0.41
CPSF1-205ENST00000531042 DIMT1Q9UNQ2 313 aaKnown RBP12.49□□□□□ -0.41
CPSF1-205ENST00000531042 TRBV5-5A0A0J9YX44 114 aa12.48□□□□□ -0.41
CPSF1-205ENST00000531042 IRGMA1A4Y4 181 aa12.48□□□□□ -0.41
CPSF1-205ENST00000531042 C15orf65H3BRN8 121 aa12.48□□□□□ -0.41
CPSF1-205ENST00000531042 K7EIL1 84 aa12.48□□□□□ -0.41
CPSF1-205ENST00000531042 HSD17B6O14756 317 aa12.48□□□□□ -0.41
CPSF1-205ENST00000531042 ZNF780AO75290 641 aaPredicted RBP12.48□□□□□ -0.41
CPSF1-205ENST00000531042 BAG2O95816 211 aa12.48□□□□□ -0.41
CPSF1-205ENST00000531042 LALBAP00709 142 aa12.48□□□□□ -0.41
CPSF1-205ENST00000531042 GAPDHP04406 335 aaKnown RBP12.48□□□□□ -0.41
CPSF1-205ENST00000531042 RIPK1Q13546 671 aa12.48□□□□□ -0.41
CPSF1-205ENST00000531042 EBI3Q14213 229 aa12.48□□□□□ -0.41
CPSF1-205ENST00000531042 MPV17LQ2QL34 196 aa12.48□□□□□ -0.41
CPSF1-205ENST00000531042 ATAD3CQ5T2N8 411 aa12.48□□□□□ -0.41
CPSF1-205ENST00000531042 LINC00482Q8N8I6 264 aa12.48□□□□□ -0.41
CPSF1-205ENST00000531042 OR52M1Q8NGK5 317 aa12.48□□□□□ -0.41
CPSF1-205ENST00000531042 OR13C5Q8NGS8 318 aa12.48□□□□□ -0.41
CPSF1-205ENST00000531042 GHSRQ92847 366 aa12.48□□□□□ -0.41
CPSF1-205ENST00000531042 ARL11Q969Q4 196 aa12.48□□□□□ -0.41
CPSF1-205ENST00000531042 ZNF184Q99676 751 aaPredicted RBP12.48□□□□□ -0.41
CPSF1-205ENST00000531042 CLEC2DQ9UHP7 191 aa12.48□□□□□ -0.41
CPSF1-205ENST00000531042 EXOSC1Q9Y3B2 195 aaKnown RBP12.48□□□□□ -0.41
CPSF1-205ENST00000531042 IGHV1-3A0A0C4DH29 117 aa12.47□□□□□ -0.41
CPSF1-205ENST00000531042 A0A1W2PP11 408 aa12.47□□□□□ -0.41
CPSF1-205ENST00000531042 SERPINE3A8MV23 424 aa12.47□□□□□ -0.41
CPSF1-205ENST00000531042 CCRL2O00421 344 aa12.47□□□□□ -0.41
CPSF1-205ENST00000531042 ORC5O43913 435 aa12.47□□□□□ -0.41
CPSF1-205ENST00000531042 GPX5O75715 221 aa12.47□□□□□ -0.41
CPSF1-205ENST00000531042 IGHG2P01859 326 aa12.47□□□□□ -0.41
CPSF1-205ENST00000531042 MYL12AP19105 171 aa12.47□□□□□ -0.41
CPSF1-205ENST00000531042 KRTAP10-11P60412 298 aa12.47□□□□□ -0.41
CPSF1-205ENST00000531042 RPL23AP62750 156 aaKnown RBP12.47□□□□□ -0.41
CPSF1-205ENST00000531042 SLC22A6Q4U2R8 563 aa12.47□□□□□ -0.41
CPSF1-205ENST00000531042 DMKNQ6E0U4 476 aaPredicted RBP12.47□□□□□ -0.41
CPSF1-205ENST00000531042 ETV3LQ6ZN32 361 aa12.47□□□□□ -0.41
CPSF1-205ENST00000531042 ZNF497Q6ZNH5 498 aa12.47□□□□□ -0.41
CPSF1-205ENST00000531042 MOB3BQ86TA1 216 aa12.47□□□□□ -0.41
CPSF1-205ENST00000531042 MRPL41Q8IXM3 137 aaKnown RBP12.47□□□□□ -0.41
CPSF1-205ENST00000531042 LINC00311Q8N616 119 aa12.47□□□□□ -0.41
CPSF1-205ENST00000531042 C8orf31Q8N9H6 132 aa12.47□□□□□ -0.41
CPSF1-205ENST00000531042 CCDC107Q8WV48 283 aa12.47□□□□□ -0.41
CPSF1-205ENST00000531042 GFOD1Q9NXC2 390 aa12.47□□□□□ -0.41
CPSF1-205ENST00000531042 LINC00527Q9UJ94 153 aa12.47□□□□□ -0.41
CPSF1-205ENST00000531042 MAGEA13PA6NCF6 341 aa12.46□□□□□ -0.41
CPSF1-205ENST00000531042 SDCBPO00560 298 aaPredicted RBP12.46□□□□□ -0.41
CPSF1-205ENST00000531042 MT-ND4P03905 459 aa12.46□□□□□ -0.41
CPSF1-205ENST00000531042 GTF2F2P13984 249 aa12.46□□□□□ -0.41
CPSF1-205ENST00000531042 REG1BP48304 166 aa12.46□□□□□ -0.41
CPSF1-205ENST00000531042 THBS3P49746 956 aa12.46□□□□□ -0.41
CPSF1-205ENST00000531042 RPS11P62280 158 aaKnown RBP eCLIP12.46□□□□□ -0.41
CPSF1-205ENST00000531042 EGFEM1PQ0D2K5 195 aa12.46□□□□□ -0.41
CPSF1-205ENST00000531042 Q499Y3 187 aa12.46□□□□□ -0.41
CPSF1-205ENST00000531042 YIF1BQ5BJH7 314 aa12.46□□□□□ -0.41
CPSF1-205ENST00000531042 FAM53AQ6NSI3 398 aaPredicted RBP12.46□□□□□ -0.41
CPSF1-205ENST00000531042 OR2W3Q7Z3T1 314 aa12.46□□□□□ -0.41
CPSF1-205ENST00000531042 SLC35E3Q7Z769 313 aa12.46□□□□□ -0.41
CPSF1-205ENST00000531042 OR51D1Q8NGF3 324 aa12.46□□□□□ -0.41
CPSF1-205ENST00000531042 UBALD1Q8TB05 177 aa12.46□□□□□ -0.41
CPSF1-205ENST00000531042 NEK7Q8TDX7 302 aa12.46□□□□□ -0.41
CPSF1-205ENST00000531042 TMEM80Q96HE8 168 aa12.46□□□□□ -0.41
CPSF1-205ENST00000531042 EAF1Q96JC9 268 aaPredicted RBP12.46□□□□□ -0.41
CPSF1-205ENST00000531042 ZFP57Q9NU63 452 aa12.46□□□□□ -0.41
CPSF1-205ENST00000531042 CKLFQ9UBR5 152 aa12.46□□□□□ -0.41
CPSF1-205ENST00000531042 TRAV8-7A0A075B6U6 113 aa12.45□□□□□ -0.42
CPSF1-205ENST00000531042 IGHV3-43A0A0B4J1X8 118 aa12.45□□□□□ -0.42
CPSF1-205ENST00000531042 IGHV3-72A0A0B4J1Y9 119 aa12.45□□□□□ -0.42
CPSF1-205ENST00000531042 LINC01548A6NM66 108 aa12.45□□□□□ -0.42
CPSF1-205ENST00000531042 AIPO00170 330 aa12.45□□□□□ -0.42
CPSF1-205ENST00000531042 IGHV3-43DP0DP04 118 aa12.45□□□□□ -0.42
CPSF1-205ENST00000531042 SLC6A1P30531 599 aa12.45□□□□□ -0.42
CPSF1-205ENST00000531042 SLC35B1P78383 322 aa12.45□□□□□ -0.42
CPSF1-205ENST00000531042 GPR176Q14439 515 aa12.45□□□□□ -0.42
CPSF1-205ENST00000531042 TTC23Q5W5X9 447 aa12.45□□□□□ -0.42
CPSF1-205ENST00000531042 C18orf65Q6ZTR6 163 aa12.45□□□□□ -0.42
CPSF1-205ENST00000531042 TGIF2LXQ8IUE1 241 aa12.45□□□□□ -0.42
CPSF1-205ENST00000531042 FOXRED2Q8IWF2 684 aa12.45□□□□□ -0.42
CPSF1-205ENST00000531042 IZUMO1Q8IYV9 350 aa12.45□□□□□ -0.42
CPSF1-205ENST00000531042 STPG2Q8N412 459 aa12.45□□□□□ -0.42
CPSF1-205ENST00000531042 COMMD1Q8N668 190 aa12.45□□□□□ -0.42
CPSF1-205ENST00000531042 Q8N6K4 173 aa12.45□□□□□ -0.42
CPSF1-205ENST00000531042 ZFP41Q8N8Y5 198 aa12.45□□□□□ -0.42
CPSF1-205ENST00000531042 ZNF485Q8NCK3 441 aa12.45□□□□□ -0.42
CPSF1-205ENST00000531042 ST6GALNAC6Q969X2 333 aa12.45□□□□□ -0.42
CPSF1-205ENST00000531042 PGLYRP3Q96LB9 341 aa12.45□□□□□ -0.42
CPSF1-205ENST00000531042 CHCHD3Q9NX63 227 aaKnown RBP12.45□□□□□ -0.42
CPSF1-205ENST00000531042 RCC2Q9P258 522 aaKnown RBP12.45□□□□□ -0.42
CPSF1-205ENST00000531042 WI2-2373I1.2A0A1W2PRP0 233 aa12.44□□□□□ -0.42
CPSF1-205ENST00000531042 NCBP2LA6PVI3 153 aaKnown RBP12.44□□□□□ -0.42
CPSF1-205ENST00000531042 FSTP19883 344 aa12.44□□□□□ -0.42
CPSF1-205ENST00000531042 IL3RAP26951 378 aa12.44□□□□□ -0.42
CPSF1-205ENST00000531042 HOXD3P31249 432 aaPredicted RBP12.44□□□□□ -0.42
CPSF1-205ENST00000531042 MED21Q13503 144 aa12.44□□□□□ -0.42
CPSF1-205ENST00000531042 Q3ZCU0 254 aa12.44□□□□□ -0.42
CPSF1-205ENST00000531042 C8orf86Q6ZUL3 223 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms