RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 SIRT4Q9Y6E7 314 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-219ENST00000530495 TMEM212A6NML5 194 aa11.67□□□□□ -0.54
CAPN1-219ENST00000530495 GABRPO00591 440 aa11.67□□□□□ -0.54
CAPN1-219ENST00000530495 MOSP00540 346 aa11.67□□□□□ -0.54
CAPN1-219ENST00000530495 IGHG4P01861 327 aa11.67□□□□□ -0.54
CAPN1-219ENST00000530495 CHATP28329 748 aa11.67□□□□□ -0.54
CAPN1-219ENST00000530495 FHL3Q13643 280 aa11.67□□□□□ -0.54
CAPN1-219ENST00000530495 GALEQ14376 348 aa11.67□□□□□ -0.54
CAPN1-219ENST00000530495 RSU1Q15404 277 aa11.67□□□□□ -0.54
CAPN1-219ENST00000530495 LHFPL3Q86UP9 236 aa11.67□□□□□ -0.54
CAPN1-219ENST00000530495 SATL1Q86VE3 508 aa11.67□□□□□ -0.54
CAPN1-219ENST00000530495 SYS1Q8N2H4 156 aa11.67□□□□□ -0.54
CAPN1-219ENST00000530495 SUMF2Q8NBJ7 301 aa11.67□□□□□ -0.54
CAPN1-219ENST00000530495 OR8H1Q8NGG4 311 aa11.67□□□□□ -0.54
CAPN1-219ENST00000530495 OR5AK2Q8NH90 309 aa11.67□□□□□ -0.54
CAPN1-219ENST00000530495 TNFAIP8L1Q8WVP5 186 aa11.67□□□□□ -0.54
CAPN1-219ENST00000530495 C4orf3Q8WVX3 66 aa11.67□□□□□ -0.54
CAPN1-219ENST00000530495 RTN4IP1Q8WWV3 396 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-219ENST00000530495 MRPL48Q96GC5 212 aaKnown RBP11.67□□□□□ -0.54
CAPN1-219ENST00000530495 S1PR3Q99500 378 aa11.67□□□□□ -0.54
CAPN1-219ENST00000530495 RASL11BQ9BPW5 248 aa11.67□□□□□ -0.54
CAPN1-219ENST00000530495 ISG20L2Q9H9L3 353 aaKnown RBP11.67□□□□□ -0.54
CAPN1-219ENST00000530495 SNTNA6NMZ2 147 aa11.66□□□□□ -0.54
CAPN1-219ENST00000530495 C15orf65H3BRN8 121 aa11.66□□□□□ -0.54
CAPN1-219ENST00000530495 MAGEB3O15480 346 aa11.66□□□□□ -0.54
CAPN1-219ENST00000530495 RRP9O43818 475 aaKnown RBP11.66□□□□□ -0.54
CAPN1-219ENST00000530495 IGF1P05019 195 aa11.66□□□□□ -0.54
CAPN1-219ENST00000530495 RAB3AP20336 220 aa11.66□□□□□ -0.54
CAPN1-219ENST00000530495 LPCAT4Q643R3 524 aa11.66□□□□□ -0.54
CAPN1-219ENST00000530495 OR10K1Q8NGX5 313 aa11.66□□□□□ -0.54
CAPN1-219ENST00000530495 LGALS12Q96DT0 336 aa11.66□□□□□ -0.54
CAPN1-219ENST00000530495 GPER1Q99527 375 aa11.66□□□□□ -0.54
CAPN1-219ENST00000530495 PDCD1LG2Q9BQ51 273 aa11.66□□□□□ -0.54
CAPN1-219ENST00000530495 ALG8Q9BVK2 526 aa11.66□□□□□ -0.54
CAPN1-219ENST00000530495 ZNF581Q9P0T4 197 aa11.66□□□□□ -0.54
CAPN1-219ENST00000530495 ZNF580Q9UK33 172 aa11.66□□□□□ -0.54
CAPN1-219ENST00000530495 DHDHQ9UQ10 334 aa11.66□□□□□ -0.54
CAPN1-219ENST00000530495 ST3GAL6Q9Y274 331 aa11.66□□□□□ -0.54
CAPN1-219ENST00000530495 ZNF256Q9Y2P7 627 aaPredicted RBP11.66□□□□□ -0.54
CAPN1-219ENST00000530495 ZNF736B4DX44 427 aaPredicted RBP11.65□□□□□ -0.54
CAPN1-219ENST00000530495 E9PI62 339 aa11.65□□□□□ -0.54
CAPN1-219ENST00000530495 SDCBPO00560 298 aaPredicted RBP11.65□□□□□ -0.54
CAPN1-219ENST00000530495 ORC5O43913 435 aa11.65□□□□□ -0.54
CAPN1-219ENST00000530495 HTR3BO95264 441 aa11.65□□□□□ -0.54
CAPN1-219ENST00000530495 PSMB8P28062 276 aa11.65□□□□□ -0.54
CAPN1-219ENST00000530495 INSL3P51460 131 aa11.65□□□□□ -0.54
CAPN1-219ENST00000530495 F2RL1P55085 397 aa11.65□□□□□ -0.54
CAPN1-219ENST00000530495 MRPL28Q13084 256 aaKnown RBP11.65□□□□□ -0.54
CAPN1-219ENST00000530495 ZNF260Q3ZCT1 412 aa11.65□□□□□ -0.54
CAPN1-219ENST00000530495 NHLRC3Q5JS37 347 aa11.65□□□□□ -0.54
CAPN1-219ENST00000530495 FAM71E2Q8N5Q1 922 aa11.65□□□□□ -0.54
CAPN1-219ENST00000530495 OR51A2Q8NGJ7 313 aa11.65□□□□□ -0.54
CAPN1-219ENST00000530495 ARL11Q969Q4 196 aa11.65□□□□□ -0.54
CAPN1-219ENST00000530495 HSPB9Q9BQS6 159 aa11.65□□□□□ -0.54
CAPN1-219ENST00000530495 GFOD1Q9NXC2 390 aa11.65□□□□□ -0.54
CAPN1-219ENST00000530495 STAB2Q8WWQ8 2551 aa11.64□□□□□ -0.55
CAPN1-219ENST00000530495 TMEM30CPA0ZSE6 113 aa11.64□□□□□ -0.55
CAPN1-219ENST00000530495 SAC3D1A6NKF1 404 aa11.64□□□□□ -0.55
CAPN1-219ENST00000530495 ALPLP05186 524 aa11.64□□□□□ -0.55
CAPN1-219ENST00000530495 VDAC1P21796 283 aa11.64□□□□□ -0.55
CAPN1-219ENST00000530495 IL3RAP26951 378 aa11.64□□□□□ -0.55
CAPN1-219ENST00000530495 SOX6P35712 828 aa11.64□□□□□ -0.55
CAPN1-219ENST00000530495 RBM11P57052 281 aaKnown RBP11.64□□□□□ -0.55
CAPN1-219ENST00000530495 Q3ZCU0 254 aa11.64□□□□□ -0.55
CAPN1-219ENST00000530495 CASC10Q5T4H9 136 aa11.64□□□□□ -0.55
CAPN1-219ENST00000530495 C1orf146Q5VVC0 180 aa11.64□□□□□ -0.55
CAPN1-219ENST00000530495 FAM53AQ6NSI3 398 aaPredicted RBP11.64□□□□□ -0.55
CAPN1-219ENST00000530495 OR11H1Q8NG94 326 aa11.64□□□□□ -0.55
CAPN1-219ENST00000530495 OR52N1Q8NH53 320 aa11.64□□□□□ -0.55
CAPN1-219ENST00000530495 MUC7Q8TAX7 377 aa11.64□□□□□ -0.55
CAPN1-219ENST00000530495 MYOZ3Q8TDC0 251 aa11.64□□□□□ -0.55
CAPN1-219ENST00000530495 TSEN15Q8WW01 171 aaKnown RBP11.64□□□□□ -0.55
CAPN1-219ENST00000530495 KCTD7Q96MP8 289 aa11.64□□□□□ -0.55
CAPN1-219ENST00000530495 CHCHD6Q9BRQ6 235 aa11.64□□□□□ -0.55
CAPN1-219ENST00000530495 FAM192AQ9GZU8 254 aa11.64□□□□□ -0.55
CAPN1-219ENST00000530495 IL36GQ9NZH8 169 aa11.64□□□□□ -0.55
CAPN1-219ENST00000530495 SMAD5-AS1Q9Y6J3 95 aa11.64□□□□□ -0.55
CAPN1-219ENST00000530495 GEMIN2O14893 280 aaKnown RBP11.63□□□□□ -0.55
CAPN1-219ENST00000530495 TXNL1O43396 289 aa11.63□□□□□ -0.55
CAPN1-219ENST00000530495 OR7C1O76099 320 aaPredicted RBP11.63□□□□□ -0.55
CAPN1-219ENST00000530495 CDRT1O95170 752 aa11.63□□□□□ -0.55
CAPN1-219ENST00000530495 MT-ND4P03905 459 aa11.63□□□□□ -0.55
CAPN1-219ENST00000530495 VHLP40337 213 aa11.63□□□□□ -0.55
CAPN1-219ENST00000530495 ZNF137PP52743 207 aa11.63□□□□□ -0.55
CAPN1-219ENST00000530495 KIAA0141Q14154 515 aaPredicted RBP11.63□□□□□ -0.55
CAPN1-219ENST00000530495 SLC25A48Q6ZT89 311 aaKnown RBP11.63□□□□□ -0.55
CAPN1-219ENST00000530495 LINC00596Q86U02 117 aa11.63□□□□□ -0.55
CAPN1-219ENST00000530495 CCDC107Q8WV48 283 aa11.63□□□□□ -0.55
CAPN1-219ENST00000530495 UBE2E2Q96LR5 201 aa11.63□□□□□ -0.55
CAPN1-219ENST00000530495 JAM3Q9BX67 310 aa11.63□□□□□ -0.55
CAPN1-219ENST00000530495 METTL9Q9H1A3 318 aa11.63□□□□□ -0.55
CAPN1-219ENST00000530495 ERVK13-1Q9NX77 482 aa11.63□□□□□ -0.55
CAPN1-219ENST00000530495 AASSQ9UDR5 926 aa11.63□□□□□ -0.55
CAPN1-219ENST00000530495 ING4Q9UNL4 249 aa11.63□□□□□ -0.55
CAPN1-219ENST00000530495 FADS2O95864 444 aaKnown RBP11.62□□□□□ -0.55
CAPN1-219ENST00000530495 CSTBP04080 98 aaKnown RBP11.62□□□□□ -0.55
CAPN1-219ENST00000530495 OR8U8P0C7N1 319 aa11.62□□□□□ -0.55
CAPN1-219ENST00000530495 OR5H8P0DN80 308 aa11.62□□□□□ -0.55
CAPN1-219ENST00000530495 GABRB1P18505 474 aa11.62□□□□□ -0.55
CAPN1-219ENST00000530495 PPIFP30405 207 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms