RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 RGS7BPQ6MZT1 257 aaPredicted RBP10□□□□□ -0.81
USF1-208ENST00000528768 HSD17B13Q7Z5P4 300 aaPredicted RBP10□□□□□ -0.81
USF1-208ENST00000528768 LRTM2Q8N967 370 aa10□□□□□ -0.81
USF1-208ENST00000528768 SPERTQ8NA61 448 aa10□□□□□ -0.81
USF1-208ENST00000528768 BHLHE23Q8NDY6 225 aa10□□□□□ -0.81
USF1-208ENST00000528768 STOML3Q8TAV4 291 aa10□□□□□ -0.81
USF1-208ENST00000528768 AQP10Q96PS8 301 aa10□□□□□ -0.81
USF1-208ENST00000528768 SPIN2AQ99865 258 aa10□□□□□ -0.81
USF1-208ENST00000528768 SPIN2BQ9BPZ2 258 aa10□□□□□ -0.81
USF1-208ENST00000528768 RSRP1Q9BUV0 290 aa10□□□□□ -0.81
USF1-208ENST00000528768 DNTTIP1Q9H147 329 aa10□□□□□ -0.81
USF1-208ENST00000528768 WDR13Q9H1Z4 485 aa10□□□□□ -0.81
USF1-208ENST00000528768 OR51I2Q9H344 312 aa10□□□□□ -0.81
USF1-208ENST00000528768 IFT22Q9H7X7 185 aa10□□□□□ -0.81
USF1-208ENST00000528768 SDHAF2Q9NX18 166 aa10□□□□□ -0.81
USF1-208ENST00000528768 RASL12Q9NYN1 266 aa10□□□□□ -0.81
USF1-208ENST00000528768 MTCH1Q9NZJ7 389 aa10□□□□□ -0.81
USF1-208ENST00000528768 AMDHD2Q9Y303 409 aa10□□□□□ -0.81
USF1-208ENST00000528768 FN1P02751 2386 aaKnown RBP9.99□□□□□ -0.81
USF1-208ENST00000528768 NKX2-6A6NCS4 301 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 FAM90A27PA6NNH2 459 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 IQCF6A8MYZ5 107 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 SHOXO15266 292 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 SMPD2O60906 423 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 PPYP01298 95 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 AADACP22760 399 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 CA6P23280 308 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 UCP2P55851 309 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 RND3P61587 244 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 SNTB1Q13884 538 aaKnown RBP9.99□□□□□ -0.81
USF1-208ENST00000528768 GUSBP1Q15486 140 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 OR8G1Q15617 311 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 ACSF3Q4G176 576 aaPredicted RBP9.99□□□□□ -0.81
USF1-208ENST00000528768 PAN3Q58A45 887 aaKnown RBP9.99□□□□□ -0.81
USF1-208ENST00000528768 TOR2AQ5JU69 321 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 C1QTNF12Q5T7M4 302 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 BRICD5Q6PL45 260 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 LIAT1Q6ZQX7 453 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 BEND4Q6ZU67 534 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 PRIMA1Q86XR5 153 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 CMTM1Q8IZ96 169 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 OR1J1Q8NGS3 322 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 ZNF75AQ96N20 296 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 BCL2L14Q9BZR8 327 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 SHARPINQ9H0F6 387 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 PLEKHA2Q9HB19 425 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 SLC2A9Q9NRM0 540 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 PLSCR4Q9NRQ2 329 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 TREM2Q9NZC2 230 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 PCDHB10Q9UN67 800 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 TMED3Q9Y3Q3 217 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 ATP23Q9Y6H3 246 aa9.99□□□□□ -0.81
USF1-208ENST00000528768 DUXBA0A1W2PPF3 345 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 KIAA1324LA8MWY0 1029 aaPredicted RBP9.98□□□□□ -0.81
USF1-208ENST00000528768 NUDT19A8MXV4 375 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 F8VVB4 439 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 F8VWA3 439 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 GPR31O00270 319 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 SH2D1BO14796 132 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 SYNGR1O43759 233 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 LYZL6O75951 148 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 NAPSAO96009 420 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 ACAA1P09110 424 aaPredicted RBP9.98□□□□□ -0.81
USF1-208ENST00000528768 ZNF44P15621 663 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 COX5AP20674 150 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 DUSP1P28562 367 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 TMEM187Q14656 261 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 SHEQ5VZ18 495 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 GGNBP1Q5YKI7 109 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 ZNF585AQ6P3V2 769 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 BAP18Q8IXM2 172 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 GCNT2Q8N0V5 402 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 EIF4E3Q8N5X7 224 aaKnown RBP9.98□□□□□ -0.81
USF1-208ENST00000528768 FAM169BQ8N8A8 192 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 SUMF2Q8NBJ7 301 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 OR4A4PQ8NGN8 299 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 DYRK2Q92630 601 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 KIRREL1Q96J84 757 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 ADAT1Q9BUB4 502 aaKnown RBP9.98□□□□□ -0.81
USF1-208ENST00000528768 RNF126Q9BV68 326 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 OR51B6Q9H340 312 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 TMEM100Q9NV29 134 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 NUP50Q9UKX7 468 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 UBE2J1Q9Y385 318 aaPredicted RBP9.98□□□□□ -0.81
USF1-208ENST00000528768 RTTNQ86VV8 2226 aa9.98□□□□□ -0.81
USF1-208ENST00000528768 MFSD2BA6NFX1 497 aa9.97□□□□□ -0.81
USF1-208ENST00000528768 E5RGE8 158 aa9.97□□□□□ -0.81
USF1-208ENST00000528768 K7EPK0 472 aa9.97□□□□□ -0.81
USF1-208ENST00000528768 PHF1O43189 567 aaPredicted RBP9.97□□□□□ -0.81
USF1-208ENST00000528768 WDR1O75083 606 aa9.97□□□□□ -0.81
USF1-208ENST00000528768 OR5AC1P0C628 307 aa9.97□□□□□ -0.81
USF1-208ENST00000528768 GCH1P30793 250 aa9.97□□□□□ -0.81
USF1-208ENST00000528768 KIR2DL2P43627 348 aaPredicted RBP9.97□□□□□ -0.81
USF1-208ENST00000528768 IL15RAQ13261 267 aa9.97□□□□□ -0.81
USF1-208ENST00000528768 RAB32Q13637 225 aa9.97□□□□□ -0.81
USF1-208ENST00000528768 PDCD1Q15116 288 aa9.97□□□□□ -0.81
USF1-208ENST00000528768 DEFB113Q30KQ7 82 aa9.97□□□□□ -0.81
USF1-208ENST00000528768 ZNF718Q3SXZ3 478 aa9.97□□□□□ -0.81
USF1-208ENST00000528768 PHLDA2Q53GA4 152 aa9.97□□□□□ -0.81
USF1-208ENST00000528768 BEX5Q5H9J7 111 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms