RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 CA11O75493 328 aa9.74□□□□□ -0.85
TRAPPC4-209ENST00000528230 MT-ND4P03905 459 aa9.74□□□□□ -0.85
TRAPPC4-209ENST00000528230 CPEP16870 476 aa9.74□□□□□ -0.85
TRAPPC4-209ENST00000528230 FUT3P21217 361 aa9.74□□□□□ -0.85
TRAPPC4-209ENST00000528230 NFYBP25208 207 aa9.74□□□□□ -0.85
TRAPPC4-209ENST00000528230 VHLP40337 213 aa9.74□□□□□ -0.85
TRAPPC4-209ENST00000528230 INSL4Q14641 139 aa9.74□□□□□ -0.85
TRAPPC4-209ENST00000528230 FAM27D1Q5T7N8 215 aa9.74□□□□□ -0.85
TRAPPC4-209ENST00000528230 LIPKQ5VXJ0 399 aa9.74□□□□□ -0.85
TRAPPC4-209ENST00000528230 ZNF497Q6ZNH5 498 aa9.74□□□□□ -0.85
TRAPPC4-209ENST00000528230 C16orf82Q7Z2V1 217 aa9.74□□□□□ -0.85
TRAPPC4-209ENST00000528230 Q8N2B8 174 aa9.74□□□□□ -0.85
TRAPPC4-209ENST00000528230 OR52M1Q8NGK5 317 aa9.74□□□□□ -0.85
TRAPPC4-209ENST00000528230 CNBD2Q96M20 576 aa9.74□□□□□ -0.85
TRAPPC4-209ENST00000528230 Q96M66 194 aa9.74□□□□□ -0.85
TRAPPC4-209ENST00000528230 MGLLQ99685 303 aa9.74□□□□□ -0.85
TRAPPC4-209ENST00000528230 SELENOIQ9C0D9 397 aa9.74□□□□□ -0.85
TRAPPC4-209ENST00000528230 CCDC90BQ9GZT6 254 aa9.74□□□□□ -0.85
TRAPPC4-209ENST00000528230 CST11Q9H112 138 aa9.74□□□□□ -0.85
TRAPPC4-209ENST00000528230 MMP28Q9H239 520 aa9.74□□□□□ -0.85
TRAPPC4-209ENST00000528230 BANF2Q9H503 90 aa9.74□□□□□ -0.85
TRAPPC4-209ENST00000528230 AMMECR1Q9Y4X0 333 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC4-209ENST00000528230 FAM172BPA6NC97 362 aa9.73□□□□□ -0.85
TRAPPC4-209ENST00000528230 C15orf65H3BRN8 121 aa9.73□□□□□ -0.85
TRAPPC4-209ENST00000528230 MRPS14O60783 128 aaKnown RBP9.73□□□□□ -0.85
TRAPPC4-209ENST00000528230 CRTAPO75718 401 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC4-209ENST00000528230 HSMCR30P0CW71 290 aa9.73□□□□□ -0.85
TRAPPC4-209ENST00000528230 TPTE2P1Q5T6R2 138 aa9.73□□□□□ -0.85
TRAPPC4-209ENST00000528230 RAB12Q6IQ22 244 aa9.73□□□□□ -0.85
TRAPPC4-209ENST00000528230 CCDC144NLQ6NUI1 221 aa9.73□□□□□ -0.85
TRAPPC4-209ENST00000528230 TREML4Q6UXN2 200 aa9.73□□□□□ -0.85
TRAPPC4-209ENST00000528230 TMEM91Q6ZNR0 172 aa9.73□□□□□ -0.85
TRAPPC4-209ENST00000528230 GAPTQ8N292 157 aa9.73□□□□□ -0.85
TRAPPC4-209ENST00000528230 TMEM104Q8NE00 496 aa9.73□□□□□ -0.85
TRAPPC4-209ENST00000528230 RFESDQ8TAC1 157 aa9.73□□□□□ -0.85
TRAPPC4-209ENST00000528230 NEK7Q8TDX7 302 aa9.73□□□□□ -0.85
TRAPPC4-209ENST00000528230 PRSS22Q9GZN4 317 aa9.73□□□□□ -0.85
TRAPPC4-209ENST00000528230 RAB9BQ9NP90 201 aa9.73□□□□□ -0.85
TRAPPC4-209ENST00000528230 PSG11Q9UQ72 335 aa9.73□□□□□ -0.85
TRAPPC4-209ENST00000528230 PEX16Q9Y5Y5 336 aa9.73□□□□□ -0.85
TRAPPC4-209ENST00000528230 TET2Q6N021 2002 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 TRAV39A0A0B4J263 110 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 M0QZ24 198 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 AIPO00170 330 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 ARL6IP5O75915 188 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 JUNBP17275 347 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 SSTR5P35346 364 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 MNDAP41218 407 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 RANBP1P43487 201 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 HERPUD1Q15011 391 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 TBCEQ15813 527 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 TMEM30BQ3MIR4 351 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 Q3ZCU0 254 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 UTF1Q5T230 341 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 SIGIRRQ6IA17 410 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 TRAT1Q6PIZ9 186 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 TMEM219Q86XT9 240 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 THNSL2Q86YJ6 484 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 C8orf31Q8N9H6 132 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 KCNG3Q8TAE7 436 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 CCDC107Q8WV48 283 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 ARL11Q969Q4 196 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 TMEM203Q969S6 136 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 AKR1E2Q96JD6 320 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 ZNF702PQ9H963 129 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 LIN7BQ9HAP6 207 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 ACOT13Q9NPJ3 140 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 ETAA1Q9NY74 926 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 SIGLEC9Q9Y336 463 aa9.72□□□□□ -0.85
TRAPPC4-209ENST00000528230 FAM90A9PA6NNJ1 464 aa9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 SLC22A1O15245 554 aa9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 DENRO43583 198 aaKnown RBP9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 PDCD6O75340 191 aa9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 BPNT1O95861 308 aa9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 VSIG8P0DPA2 414 aa9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 HTR2CP28335 458 aa9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 MAP2K4P45985 399 aa9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 LOXL3P58215 753 aa9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 GABARAPL2P60520 117 aa9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 RPS25P62851 125 aaKnown RBP9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 MADCAM1Q13477 382 aa9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 C6orf183Q5T699 404 aa9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 SYT6Q5T7P8 510 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 Q6ZTK2 550 aa9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 ZNF367Q7RTV3 350 aa9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 ZNF554Q86TJ5 538 aa9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 LINC00311Q8N616 119 aa9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 OR6M1Q8NGM8 313 aa9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 CFHR4Q92496 578 aa9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 RPEQ96AT9 228 aa9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 TM2D1Q9BX74 207 aa9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 YTHDF1Q9BYJ9 559 aaKnown RBP9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 Q9H521 79 aa9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 SERTAD4Q9NUC0 356 aa9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 TRAPPC2LQ9UL33 140 aa9.71□□□□□ -0.86
TRAPPC4-209ENST00000528230 TMEM14DPA8MWL7 114 aa9.7□□□□□ -0.86
TRAPPC4-209ENST00000528230 SPINT2O43291 252 aa9.7□□□□□ -0.86
TRAPPC4-209ENST00000528230 OR2F2O95006 317 aa9.7□□□□□ -0.86
TRAPPC4-209ENST00000528230 MPIG6BO95866 241 aa9.7□□□□□ -0.86
TRAPPC4-209ENST00000528230 FAM106CPP0CH98 169 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms