RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 C12orf77C9JDV5 145 aa13.58□□□□□ -0.24
SMCO4-204ENST00000527149 IGHV1-69P01742 117 aa13.58□□□□□ -0.24
SMCO4-204ENST00000527149 EPHA1P21709 976 aa13.58□□□□□ -0.24
SMCO4-204ENST00000527149 CDK2P24941 298 aa13.58□□□□□ -0.24
SMCO4-204ENST00000527149 DYNC1I2Q13409 638 aaKnown RBP13.58□□□□□ -0.24
SMCO4-204ENST00000527149 UTF1Q5T230 341 aa13.58□□□□□ -0.24
SMCO4-204ENST00000527149 GPR157Q5UAW9 335 aa13.58□□□□□ -0.24
SMCO4-204ENST00000527149 RUSC1-AS1Q66K80 236 aa13.58□□□□□ -0.24
SMCO4-204ENST00000527149 NCR3LG1Q68D85 454 aa13.58□□□□□ -0.24
SMCO4-204ENST00000527149 ZNF880Q6PDB4 577 aa13.58□□□□□ -0.24
SMCO4-204ENST00000527149 BRD3OSQ6XYD6 125 aa13.58□□□□□ -0.24
SMCO4-204ENST00000527149 Q6ZTK2 550 aa13.58□□□□□ -0.24
SMCO4-204ENST00000527149 PIP4P2Q8N4L2 257 aa13.58□□□□□ -0.24
SMCO4-204ENST00000527149 OR4K15Q8NH41 348 aa13.58□□□□□ -0.24
SMCO4-204ENST00000527149 CCDC107Q8WV48 283 aa13.58□□□□□ -0.24
SMCO4-204ENST00000527149 RAB3CQ96E17 227 aa13.58□□□□□ -0.24
SMCO4-204ENST00000527149 KIRREL1Q96J84 757 aa13.58□□□□□ -0.24
SMCO4-204ENST00000527149 ATG5Q9H1Y0 275 aa13.58□□□□□ -0.24
SMCO4-204ENST00000527149 ABCG5Q9H222 651 aa13.58□□□□□ -0.24
SMCO4-204ENST00000527149 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.58□□□□□ -0.24
SMCO4-204ENST00000527149 SESN1Q9Y6P5 492 aa13.58□□□□□ -0.24
SMCO4-204ENST00000527149 A0A087X0M5 115 aa13.57□□□□□ -0.24
SMCO4-204ENST00000527149 A0A1B0GX30 115 aa13.57□□□□□ -0.24
SMCO4-204ENST00000527149 GNB3P16520 340 aa13.57□□□□□ -0.24
SMCO4-204ENST00000527149 RCC1P18754 421 aaPredicted RBP13.57□□□□□ -0.24
SMCO4-204ENST00000527149 OMGP23515 440 aa13.57□□□□□ -0.24
SMCO4-204ENST00000527149 RORCP51449 518 aa13.57□□□□□ -0.24
SMCO4-204ENST00000527149 PDZD9Q8IXQ8 264 aa13.57□□□□□ -0.24
SMCO4-204ENST00000527149 BCL6BQ8N143 479 aaPredicted RBP13.57□□□□□ -0.24
SMCO4-204ENST00000527149 PNKDQ8N490 385 aa13.57□□□□□ -0.24
SMCO4-204ENST00000527149 ZNF565Q8N9K5 539 aa13.57□□□□□ -0.24
SMCO4-204ENST00000527149 AJUBAQ96IF1 538 aa13.57□□□□□ -0.24
SMCO4-204ENST00000527149 hCG_1809904A0A1W2PP81 198 aa13.56□□□□□ -0.24
SMCO4-204ENST00000527149 A0A1W2PPE2 198 aa13.56□□□□□ -0.24
SMCO4-204ENST00000527149 A0A1W2PR64 198 aa13.56□□□□□ -0.24
SMCO4-204ENST00000527149 A0A1W2PRV1 198 aa13.56□□□□□ -0.24
SMCO4-204ENST00000527149 ODF3BA8MYP8 253 aa13.56□□□□□ -0.24
SMCO4-204ENST00000527149 SCGNO76038 276 aa13.56□□□□□ -0.24
SMCO4-204ENST00000527149 ZNF182P17025 639 aaPredicted RBP13.56□□□□□ -0.24
SMCO4-204ENST00000527149 COX7A1P24310 79 aa13.56□□□□□ -0.24
SMCO4-204ENST00000527149 CD34P28906 385 aa13.56□□□□□ -0.24
SMCO4-204ENST00000527149 UBE2E1P51965 193 aa13.56□□□□□ -0.24
SMCO4-204ENST00000527149 GUCA2AQ02747 115 aa13.56□□□□□ -0.24
SMCO4-204ENST00000527149 UBE2NLQ5JXB2 153 aa13.56□□□□□ -0.24
SMCO4-204ENST00000527149 SAMD12Q8N8I0 201 aa13.56□□□□□ -0.24
SMCO4-204ENST00000527149 OR11H6Q8NGC7 330 aa13.56□□□□□ -0.24
SMCO4-204ENST00000527149 ACOT12Q8WYK0 555 aa13.56□□□□□ -0.24
SMCO4-204ENST00000527149 ZMAT3Q9HA38 289 aaKnown RBP13.56□□□□□ -0.24
SMCO4-204ENST00000527149 C12orf4Q9NQ89 552 aa13.56□□□□□ -0.24
SMCO4-204ENST00000527149 CCDC59Q9P031 241 aaKnown RBP13.56□□□□□ -0.24
SMCO4-204ENST00000527149 ELF5Q9UKW6 265 aaPredicted RBP13.56□□□□□ -0.24
SMCO4-204ENST00000527149 A0A0A6YYH2 397 aa13.55□□□□□ -0.24
SMCO4-204ENST00000527149 A6NJ64 397 aa13.55□□□□□ -0.24
SMCO4-204ENST00000527149 SERPINE3A8MV23 424 aa13.55□□□□□ -0.24
SMCO4-204ENST00000527149 ZNF701M0R085 212 aaPredicted RBP13.55□□□□□ -0.24
SMCO4-204ENST00000527149 F2RL2O00254 374 aa13.55□□□□□ -0.24
SMCO4-204ENST00000527149 ORC5O43913 435 aa13.55□□□□□ -0.24
SMCO4-204ENST00000527149 NOL3O60936 208 aaKnown RBP13.55□□□□□ -0.24
SMCO4-204ENST00000527149 GZMHP20718 246 aa13.55□□□□□ -0.24
SMCO4-204ENST00000527149 BPIFB3P59826 476 aa13.55□□□□□ -0.24
SMCO4-204ENST00000527149 HMGN3Q15651 99 aa13.55□□□□□ -0.24
SMCO4-204ENST00000527149 ZNF260Q3ZCT1 412 aa13.55□□□□□ -0.24
SMCO4-204ENST00000527149 C6orf183Q5T699 404 aa13.55□□□□□ -0.24
SMCO4-204ENST00000527149 ZNF626Q68DY1 528 aa13.55□□□□□ -0.24
SMCO4-204ENST00000527149 C5orf24Q7Z6I8 188 aa13.55□□□□□ -0.24
SMCO4-204ENST00000527149 ZNF554Q86TJ5 538 aa13.55□□□□□ -0.24
SMCO4-204ENST00000527149 UBALD1Q8TB05 177 aa13.55□□□□□ -0.24
SMCO4-204ENST00000527149 C22orf15Q8WYQ4 148 aa13.55□□□□□ -0.24
SMCO4-204ENST00000527149 ZNF48Q96MX3 618 aaPredicted RBP13.55□□□□□ -0.24
SMCO4-204ENST00000527149 SLC6A7Q99884 636 aa13.55□□□□□ -0.24
SMCO4-204ENST00000527149 TMEM133Q9H2Q1 129 aa13.55□□□□□ -0.24
SMCO4-204ENST00000527149 HEXA-AS1Q9H8Q6 139 aa13.55□□□□□ -0.24
SMCO4-204ENST00000527149 ZNF286AQ9HBT8 521 aa13.55□□□□□ -0.24
SMCO4-204ENST00000527149 IDI2-AS1Q9NZ38 188 aa13.55□□□□□ -0.24
SMCO4-204ENST00000527149 TRAPPC2LQ9UL33 140 aa13.55□□□□□ -0.24
SMCO4-204ENST00000527149 IGHV2-26A0A0B4J1V2 119 aa13.54□□□□□ -0.24
SMCO4-204ENST00000527149 NPFFO15130 113 aa13.54□□□□□ -0.24
SMCO4-204ENST00000527149 EIF4EP06730 217 aaKnown RBP13.54□□□□□ -0.24
SMCO4-204ENST00000527149 SAA4P35542 130 aa13.54□□□□□ -0.24
SMCO4-204ENST00000527149 LOXL3P58215 753 aa13.54□□□□□ -0.24
SMCO4-204ENST00000527149 LDLRAD2Q5SZI1 272 aa13.54□□□□□ -0.24
SMCO4-204ENST00000527149 FOXB2Q5VYV0 432 aa13.54□□□□□ -0.24
SMCO4-204ENST00000527149 MOB1BQ7L9L4 216 aa13.54□□□□□ -0.24
SMCO4-204ENST00000527149 OR10A7Q8NGE5 316 aa13.54□□□□□ -0.24
SMCO4-204ENST00000527149 OR1L1Q8NH94 360 aa13.54□□□□□ -0.24
SMCO4-204ENST00000527149 RFESDQ8TAC1 157 aa13.54□□□□□ -0.24
SMCO4-204ENST00000527149 ARL11Q969Q4 196 aa13.54□□□□□ -0.24
SMCO4-204ENST00000527149 CMSS1Q9BQ75 279 aaKnown RBP13.54□□□□□ -0.24
SMCO4-204ENST00000527149 SUCNR1Q9BXA5 334 aa13.54□□□□□ -0.24
SMCO4-204ENST00000527149 SLIRPQ9GZT3 109 aaKnown RBP13.54□□□□□ -0.24
SMCO4-204ENST00000527149 RIMS4Q9H426 269 aaPredicted RBP13.54□□□□□ -0.24
SMCO4-204ENST00000527149 TAF9BQ9HBM6 251 aa13.54□□□□□ -0.24
SMCO4-204ENST00000527149 COMMD3Q9UBI1 195 aa13.54□□□□□ -0.24
SMCO4-204ENST00000527149 A0A075B6Q4 140 aa13.53□□□□□ -0.24
SMCO4-204ENST00000527149 SMIM31A0A1B0GVY4 71 aa13.53□□□□□ -0.24
SMCO4-204ENST00000527149 A0A1W2PRD5 423 aa13.53□□□□□ -0.24
SMCO4-204ENST00000527149 A0A1W2PRF3 423 aa13.53□□□□□ -0.24
SMCO4-204ENST00000527149 A0A1W2PRM7 423 aa13.53□□□□□ -0.24
SMCO4-204ENST00000527149 FAM172BPA6NC97 362 aa13.53□□□□□ -0.24
SMCO4-204ENST00000527149 TMEM235A6NFC5 223 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms