RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 FAM220AQ7Z4H9 259 aa11.19□□□□□ -0.62
CPSF1-201ENST00000526271 STPG2Q8N412 459 aa11.19□□□□□ -0.62
CPSF1-201ENST00000526271 OR51T1Q8NGJ9 327 aa11.19□□□□□ -0.62
CPSF1-201ENST00000526271 OR9G1Q8NH87 305 aa11.19□□□□□ -0.62
CPSF1-201ENST00000526271 PLPPR1Q8TBJ4 325 aa11.19□□□□□ -0.62
CPSF1-201ENST00000526271 C10orf35Q96D05 121 aa11.19□□□□□ -0.62
CPSF1-201ENST00000526271 MND1Q9BWT6 205 aa11.19□□□□□ -0.62
CPSF1-201ENST00000526271 CCDC90BQ9GZT6 254 aa11.19□□□□□ -0.62
CPSF1-201ENST00000526271 HYDINQ4G0P3 5121 aa11.18□□□□□ -0.62
CPSF1-201ENST00000526271 OR4C45A6NMZ5 311 aa11.18□□□□□ -0.62
CPSF1-201ENST00000526271 ZNF729A6NN14 1252 aaPredicted RBP11.18□□□□□ -0.62
CPSF1-201ENST00000526271 M0QZK8 103 aa11.18□□□□□ -0.62
CPSF1-201ENST00000526271 SH2D1BO14796 132 aa11.18□□□□□ -0.62
CPSF1-201ENST00000526271 MYL12BO14950 172 aa11.18□□□□□ -0.62
CPSF1-201ENST00000526271 OGG1O15527 345 aa11.18□□□□□ -0.62
CPSF1-201ENST00000526271 ZNF44P15621 663 aa11.18□□□□□ -0.62
CPSF1-201ENST00000526271 NFYBP25208 207 aa11.18□□□□□ -0.62
CPSF1-201ENST00000526271 MAP2K4P45985 399 aa11.18□□□□□ -0.62
CPSF1-201ENST00000526271 GTF2A1P52655 376 aaPredicted RBP11.18□□□□□ -0.62
CPSF1-201ENST00000526271 DGCR2P98153 550 aa11.18□□□□□ -0.62
CPSF1-201ENST00000526271 SCN1BQ07699 218 aa11.18□□□□□ -0.62
CPSF1-201ENST00000526271 ALKBH1Q13686 389 aaKnown RBP11.18□□□□□ -0.62
CPSF1-201ENST00000526271 EBI3Q14213 229 aa11.18□□□□□ -0.62
CPSF1-201ENST00000526271 CCDC58Q4VC31 144 aa11.18□□□□□ -0.62
CPSF1-201ENST00000526271 ASPHD1Q5U4P2 390 aa11.18□□□□□ -0.62
CPSF1-201ENST00000526271 RPL22L1Q6P5R6 122 aaKnown RBP11.18□□□□□ -0.62
CPSF1-201ENST00000526271 LHFPL2Q6ZUX7 228 aa11.18□□□□□ -0.62
CPSF1-201ENST00000526271 ZNF695Q8IW36 515 aa11.18□□□□□ -0.62
CPSF1-201ENST00000526271 PLSCR3Q9NRY6 295 aa11.18□□□□□ -0.62
CPSF1-201ENST00000526271 CALYQ9NYX4 217 aa11.18□□□□□ -0.62
CPSF1-201ENST00000526271 KIF25Q9UIL4 384 aa11.18□□□□□ -0.62
CPSF1-201ENST00000526271 PLECQ15149 4684 aaKnown RBP11.18□□□□□ -0.62
CPSF1-201ENST00000526271 IGHV3-72A0A0B4J1Y9 119 aa11.17□□□□□ -0.62
CPSF1-201ENST00000526271 TRIM64CA6NLI5 447 aa11.17□□□□□ -0.62
CPSF1-201ENST00000526271 ZNF736B4DX44 427 aaPredicted RBP11.17□□□□□ -0.62
CPSF1-201ENST00000526271 CCL24O00175 119 aa11.17□□□□□ -0.62
CPSF1-201ENST00000526271 HSPB6O14558 160 aa11.17□□□□□ -0.62
CPSF1-201ENST00000526271 FGF16O43320 207 aa11.17□□□□□ -0.62
CPSF1-201ENST00000526271 IGKV1D-33P01593 117 aa11.17□□□□□ -0.62
CPSF1-201ENST00000526271 IGKV1-33P01594 117 aa11.17□□□□□ -0.62
CPSF1-201ENST00000526271 ISG15P05161 165 aa11.17□□□□□ -0.62
CPSF1-201ENST00000526271 CD1AP06126 327 aa11.17□□□□□ -0.62
CPSF1-201ENST00000526271 UBCP0CG48 685 aaKnown RBP11.17□□□□□ -0.62
CPSF1-201ENST00000526271 SPHARQ15513 63 aa11.17□□□□□ -0.62
CPSF1-201ENST00000526271 TBCEQ15813 527 aaPredicted RBP11.17□□□□□ -0.62
CPSF1-201ENST00000526271 RSBN1Q5VWQ0 802 aaPredicted RBP11.17□□□□□ -0.62
CPSF1-201ENST00000526271 XAF1Q6GPH4 301 aa11.17□□□□□ -0.62
CPSF1-201ENST00000526271 RNF152Q8N8N0 203 aa11.17□□□□□ -0.62
CPSF1-201ENST00000526271 Q8N9W7 124 aa11.17□□□□□ -0.62
CPSF1-201ENST00000526271 CCDC54Q8NEL0 328 aa11.17□□□□□ -0.62
CPSF1-201ENST00000526271 OR51D1Q8NGF3 324 aa11.17□□□□□ -0.62
CPSF1-201ENST00000526271 OR13C9Q8NGT0 318 aa11.17□□□□□ -0.62
CPSF1-201ENST00000526271 RFESDQ8TAC1 157 aa11.17□□□□□ -0.62
CPSF1-201ENST00000526271 CHPT1Q8WUD6 406 aa11.17□□□□□ -0.62
CPSF1-201ENST00000526271 TOMM40LQ969M1 308 aa11.17□□□□□ -0.62
CPSF1-201ENST00000526271 SPSB1Q96BD6 273 aa11.17□□□□□ -0.62
CPSF1-201ENST00000526271 ISYNA1Q9NPH2 558 aa11.17□□□□□ -0.62
CPSF1-201ENST00000526271 ACOT13Q9NPJ3 140 aa11.17□□□□□ -0.62
CPSF1-201ENST00000526271 ZFP57Q9NU63 452 aa11.17□□□□□ -0.62
CPSF1-201ENST00000526271 SIRT4Q9Y6E7 314 aaPredicted RBP11.17□□□□□ -0.62
CPSF1-201ENST00000526271 A0A087WXM4 84 aa11.16□□□□□ -0.62
CPSF1-201ENST00000526271 SERPINE3A8MV23 424 aa11.16□□□□□ -0.62
CPSF1-201ENST00000526271 NUDT19A8MXV4 375 aa11.16□□□□□ -0.62
CPSF1-201ENST00000526271 TOR1AO14656 332 aa11.16□□□□□ -0.62
CPSF1-201ENST00000526271 SERPINA3P01011 423 aa11.16□□□□□ -0.62
CPSF1-201ENST00000526271 IL1AP01583 271 aa11.16□□□□□ -0.62
CPSF1-201ENST00000526271 NHLRC4P0CG21 123 aaPredicted RBP11.16□□□□□ -0.62
CPSF1-201ENST00000526271 FAM106CPP0CH98 169 aa11.16□□□□□ -0.62
CPSF1-201ENST00000526271 TMEM11P17152 192 aa11.16□□□□□ -0.62
CPSF1-201ENST00000526271 PRKACBP22694 351 aa11.16□□□□□ -0.62
CPSF1-201ENST00000526271 SSTR5P35346 364 aa11.16□□□□□ -0.62
CPSF1-201ENST00000526271 CEACAM3P40198 252 aa11.16□□□□□ -0.62
CPSF1-201ENST00000526271 GLP1RP43220 463 aa11.16□□□□□ -0.62
CPSF1-201ENST00000526271 GNG10P50151 68 aa11.16□□□□□ -0.62
CPSF1-201ENST00000526271 PRRX1P54821 245 aa11.16□□□□□ -0.62
CPSF1-201ENST00000526271 KIAA0141Q14154 515 aaPredicted RBP11.16□□□□□ -0.62
CPSF1-201ENST00000526271 LTC4SQ16873 150 aa11.16□□□□□ -0.62
CPSF1-201ENST00000526271 UBE2UQ5VVX9 321 aa11.16□□□□□ -0.62
CPSF1-201ENST00000526271 DMKNQ6E0U4 476 aaPredicted RBP11.16□□□□□ -0.62
CPSF1-201ENST00000526271 SVOPQ8N4V2 548 aa11.16□□□□□ -0.62
CPSF1-201ENST00000526271 TMEM104Q8NE00 496 aa11.16□□□□□ -0.62
CPSF1-201ENST00000526271 TSPAN14Q8NG11 270 aa11.16□□□□□ -0.62
CPSF1-201ENST00000526271 OR4D6Q8NGJ1 314 aa11.16□□□□□ -0.62
CPSF1-201ENST00000526271 DPF1Q92782 380 aa11.16□□□□□ -0.62
CPSF1-201ENST00000526271 RPEQ96AT9 228 aa11.16□□□□□ -0.62
CPSF1-201ENST00000526271 EAF1Q96JC9 268 aaPredicted RBP11.16□□□□□ -0.62
CPSF1-201ENST00000526271 MCRIP2Q9BUT9 160 aaKnown RBP11.16□□□□□ -0.62
CPSF1-201ENST00000526271 GPR61Q9BZJ8 451 aa11.16□□□□□ -0.62
CPSF1-201ENST00000526271 IDI2-AS1Q9NZ38 188 aa11.16□□□□□ -0.62
CPSF1-201ENST00000526271 DEGS1O15121 323 aa11.15□□□□□ -0.62
CPSF1-201ENST00000526271 MNDAP41218 407 aa11.15□□□□□ -0.62
CPSF1-201ENST00000526271 GPR12P47775 334 aa11.15□□□□□ -0.62
CPSF1-201ENST00000526271 TAS2R43P59537 309 aa11.15□□□□□ -0.62
CPSF1-201ENST00000526271 GPR50Q13585 617 aa11.15□□□□□ -0.62
CPSF1-201ENST00000526271 FHL3Q13643 280 aa11.15□□□□□ -0.62
CPSF1-201ENST00000526271 MED22Q15528 200 aa11.15□□□□□ -0.62
CPSF1-201ENST00000526271 TMEM244Q5VVB8 128 aa11.15□□□□□ -0.62
CPSF1-201ENST00000526271 CCDC144NLQ6NUI1 221 aa11.15□□□□□ -0.62
CPSF1-201ENST00000526271 SLC35E3Q7Z769 313 aa11.15□□□□□ -0.62
CPSF1-201ENST00000526271 SAXO1Q8IYX7 474 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms