RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 TCP10Q12799 353 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 SLC18B1Q6NT16 456 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 TBPL2Q6SJ96 375 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 IGFL2Q6UWQ7 119 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 ALKAL1Q6UXT8 129 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 NOTCH2NLQ7Z3S9 236 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 C6orf120Q7Z4R8 191 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 SLC35G3Q8N808 338 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 BEST4Q8NFU0 473 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 OR51A2Q8NGJ7 313 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 OR10J6PQ8NGY7 276 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 ZNRF2Q8NHG8 242 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 SECTM1Q8WVN6 248 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.53□□□□□ -1.84
CD44-213ENST00000525209 BORCS7Q96B45 105 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 RNF185Q96GF1 192 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 DNAJC30Q96LL9 226 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 LINC00477Q96M19 166 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 PPP1R2P1Q96PQ5 205 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 OR2M4Q96R27 311 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 OR52E6Q96RD3 313 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 METTL26Q96S19 204 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 CDX2Q99626 313 aaPredicted RBP3.53□□□□□ -1.84
CD44-213ENST00000525209 EBF4Q9BQW3 602 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 KRTAP3-1Q9BYR8 98 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 SLC17A9Q9BYT1 436 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 CHST5Q9GZS9 411 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 RBM38Q9H0Z9 239 aaKnown RBP3.53□□□□□ -1.84
CD44-213ENST00000525209 PANK3Q9H999 370 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 PLSCR3Q9NRY6 295 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 TMEM100Q9NV29 134 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 MTFP1Q9UDX5 166 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 PSG8Q9UQ74 426 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 WSB1Q9Y6I7 421 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 FER1L6Q2WGJ9 1857 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 RTL1A6NKG5 1358 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 CARMIL3Q8ND23 1372 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 SAA2-SAA4A0A096LPE2 208 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 TRAV8-2A0A0B4J237 113 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 MAP1LC3B2A6NCE7 125 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 EEF1E1-BLOC1S5C9J1V9 151 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 XKRYO14609 159 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 EEF1E1O43324 174 aaKnown RBP3.52□□□□□ -1.85
CD44-213ENST00000525209 GCM2O75603 506 aaPredicted RBP3.52□□□□□ -1.85
CD44-213ENST00000525209 TRMUO75648 421 aaKnown RBP3.52□□□□□ -1.85
CD44-213ENST00000525209 OR56A5P0C7T3 313 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 SPNP16150 400 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 CXCL2P19875 107 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 MPGP29372 298 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 AGTR1P30556 359 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 S100A7P31151 101 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 MARCKSL1P49006 195 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 H2BFSP57053 126 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 DYNLL1P63167 89 aaKnown RBP3.52□□□□□ -1.85
CD44-213ENST00000525209 GTF2BQ00403 316 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 CD47Q08722 323 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 NSDHLQ15738 373 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 C17orf58Q2M2W7 97 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 ZNF718Q3SXZ3 478 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 WDR38Q5JTN6 314 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 TSPO2Q5TGU0 170 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 RSBN1Q5VWQ0 802 aaPredicted RBP3.52□□□□□ -1.85
CD44-213ENST00000525209 FBXW9Q5XUX1 488 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 DGAT2L6Q6ZPD8 337 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 LRRC28Q86X40 367 aaPredicted RBP3.52□□□□□ -1.85
CD44-213ENST00000525209 CDC20BQ86Y33 519 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 DOLPP1Q86YN1 238 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 FAM71E2Q8N5Q1 922 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 TMEM178AQ8NBL3 297 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 C11orf72Q8NBR9 251 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 OR10AD1Q8NGE0 317 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 OR52L1Q8NGH7 329 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 OR9I1Q8NGQ6 314 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 OR5J2Q8NH18 312 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 OR1S1Q8NH92 325 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 C1orf54Q8WWF1 131 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 DNAJC9Q8WXX5 260 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 ACY3Q96HD9 319 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 GMPPAQ96IJ6 420 aaPredicted RBP3.52□□□□□ -1.85
CD44-213ENST00000525209 FOPNLQ96NB1 174 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 MAP1LC3BQ9GZQ8 125 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 MOB1AQ9H8S9 216 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 COL5A3P25940 1745 aaPredicted RBP3.52□□□□□ -1.85
CD44-213ENST00000525209 TMEM131Q92545 1883 aa3.52□□□□□ -1.85
CD44-213ENST00000525209 FER1L5A0AVI2 2057 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 DLEC1Q9Y238 1755 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 MYH3P11055 1940 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 IGHV3OR16-13A0A075B7E8 117 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 TRAV8-6A0A0B4J262 113 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 TRGV8A0A0C4DH27 118 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 A0A1W2PRE2 83 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 C8orf87E5RJ46 101 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 AGPAT2O15120 278 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 CCDC22O60826 627 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 PDCD6O75340 191 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 SPAG7O75391 227 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 SERPINB7O75635 380 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 EPPINO95925 133 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 ERGP11308 486 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 IGLL1P15814 213 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms