RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 UNQ9370/PRO34162Q6UXP9 181 aa12.13□□□□□ -0.47
MRPS28-209ENST00000522987 ARL11Q969Q4 196 aa12.13□□□□□ -0.47
MRPS28-209ENST00000522987 CYYR1Q96J86 154 aa12.13□□□□□ -0.47
MRPS28-209ENST00000522987 JAM3Q9BX67 310 aa12.13□□□□□ -0.47
MRPS28-209ENST00000522987 FADS2O95864 444 aaKnown RBP12.12□□□□□ -0.47
MRPS28-209ENST00000522987 GAPDHP04406 335 aaKnown RBP12.12□□□□□ -0.47
MRPS28-209ENST00000522987 GPR12P47775 334 aa12.12□□□□□ -0.47
MRPS28-209ENST00000522987 RBM11P57052 281 aaKnown RBP12.12□□□□□ -0.47
MRPS28-209ENST00000522987 DGCR2P98153 550 aa12.12□□□□□ -0.47
MRPS28-209ENST00000522987 SMN1Q16637 294 aaKnown RBP12.12□□□□□ -0.47
MRPS28-209ENST00000522987 DDI2Q5TDH0 399 aa12.12□□□□□ -0.47
MRPS28-209ENST00000522987 Q8N9W7 124 aa12.12□□□□□ -0.47
MRPS28-209ENST00000522987 OR52N1Q8NH53 320 aa12.12□□□□□ -0.47
MRPS28-209ENST00000522987 WWC2-AS2Q96NR7 200 aa12.12□□□□□ -0.47
MRPS28-209ENST00000522987 ASCL2Q99929 193 aa12.12□□□□□ -0.47
MRPS28-209ENST00000522987 HSPB9Q9BQS6 159 aa12.12□□□□□ -0.47
MRPS28-209ENST00000522987 MCRIP2Q9BUT9 160 aaKnown RBP12.12□□□□□ -0.47
MRPS28-209ENST00000522987 DCLRE1BQ9H816 532 aa12.12□□□□□ -0.47
MRPS28-209ENST00000522987 LINC00574Q9H8X3 128 aa12.12□□□□□ -0.47
MRPS28-209ENST00000522987 ZFP57Q9NU63 452 aa12.12□□□□□ -0.47
MRPS28-209ENST00000522987 TMEM30CPA0ZSE6 113 aa12.11□□□□□ -0.47
MRPS28-209ENST00000522987 DYNC1I1O14576 645 aa12.11□□□□□ -0.47
MRPS28-209ENST00000522987 ATP5HO75947 161 aa12.11□□□□□ -0.47
MRPS28-209ENST00000522987 CSTBP04080 98 aaKnown RBP12.11□□□□□ -0.47
MRPS28-209ENST00000522987 ZNF816Q0VGE8 651 aaPredicted RBP12.11□□□□□ -0.47
MRPS28-209ENST00000522987 SLC22A6Q4U2R8 563 aa12.11□□□□□ -0.47
MRPS28-209ENST00000522987 OR2G6Q5TZ20 316 aa12.11□□□□□ -0.47
MRPS28-209ENST00000522987 ZNF529Q6P280 563 aa12.11□□□□□ -0.47
MRPS28-209ENST00000522987 C5orf24Q7Z6I8 188 aa12.11□□□□□ -0.47
MRPS28-209ENST00000522987 PRR18Q8N4B5 295 aa12.11□□□□□ -0.47
MRPS28-209ENST00000522987 OR10V1Q8NGI7 309 aa12.11□□□□□ -0.47
MRPS28-209ENST00000522987 OR2T10Q8NGZ9 312 aa12.11□□□□□ -0.47
MRPS28-209ENST00000522987 TMEM106AQ96A25 262 aa12.11□□□□□ -0.47
MRPS28-209ENST00000522987 CPNE2Q96FN4 548 aaPredicted RBP12.11□□□□□ -0.47
MRPS28-209ENST00000522987 SLC29A1Q99808 456 aa12.11□□□□□ -0.47
MRPS28-209ENST00000522987 METTL9Q9H1A3 318 aa12.11□□□□□ -0.47
MRPS28-209ENST00000522987 NCOR1P1Q9H4R4 102 aa12.11□□□□□ -0.47
MRPS28-209ENST00000522987 FAM53CQ9NYF3 392 aa12.11□□□□□ -0.47
MRPS28-209ENST00000522987 SIRT4Q9Y6E7 314 aaPredicted RBP12.11□□□□□ -0.47
MRPS28-209ENST00000522987 MAGEA13PA6NCF6 341 aa12.1□□□□□ -0.47
MRPS28-209ENST00000522987 C15orf65H3BRN8 121 aa12.1□□□□□ -0.47
MRPS28-209ENST00000522987 AP4M1O00189 453 aa12.1□□□□□ -0.47
MRPS28-209ENST00000522987 LIMS3P0CW19 117 aa12.1□□□□□ -0.47
MRPS28-209ENST00000522987 LIMS4P0CW20 117 aa12.1□□□□□ -0.47
MRPS28-209ENST00000522987 ZNF93P35789 620 aaPredicted RBP12.1□□□□□ -0.47
MRPS28-209ENST00000522987 ECI1P42126 302 aa12.1□□□□□ -0.47
MRPS28-209ENST00000522987 ETV1P50549 477 aa12.1□□□□□ -0.47
MRPS28-209ENST00000522987 GPR50Q13585 617 aa12.1□□□□□ -0.47
MRPS28-209ENST00000522987 CXorf66Q5JRM2 361 aaPredicted RBP12.1□□□□□ -0.47
MRPS28-209ENST00000522987 TEX38Q6PEX7 206 aa12.1□□□□□ -0.47
MRPS28-209ENST00000522987 Q8N6K4 173 aa12.1□□□□□ -0.47
MRPS28-209ENST00000522987 OR4K15Q8NH41 348 aa12.1□□□□□ -0.47
MRPS28-209ENST00000522987 RHOXF1Q8NHV9 184 aa12.1□□□□□ -0.47
MRPS28-209ENST00000522987 GPR148Q8TDV2 347 aa12.1□□□□□ -0.47
MRPS28-209ENST00000522987 APH1BQ8WW43 257 aa12.1□□□□□ -0.47
MRPS28-209ENST00000522987 RTN4IP1Q8WWV3 396 aaPredicted RBP12.1□□□□□ -0.47
MRPS28-209ENST00000522987 S100A13Q99584 98 aa12.1□□□□□ -0.47
MRPS28-209ENST00000522987 ABCG5Q9H222 651 aa12.1□□□□□ -0.47
MRPS28-209ENST00000522987 GFOD1Q9NXC2 390 aa12.1□□□□□ -0.47
MRPS28-209ENST00000522987 RYR3Q15413 4870 aa12.1□□□□□ -0.47
MRPS28-209ENST00000522987 TENM3Q9P273 2699 aa12.09□□□□□ -0.47
MRPS28-209ENST00000522987 AIPO00170 330 aa12.09□□□□□ -0.47
MRPS28-209ENST00000522987 MPZL2O60487 215 aa12.09□□□□□ -0.47
MRPS28-209ENST00000522987 CD2P06729 351 aa12.09□□□□□ -0.47
MRPS28-209ENST00000522987 SLC2A2P11168 524 aaPredicted RBP12.09□□□□□ -0.47
MRPS28-209ENST00000522987 MYF6P23409 242 aa12.09□□□□□ -0.47
MRPS28-209ENST00000522987 KCNJ3P48549 501 aa12.09□□□□□ -0.47
MRPS28-209ENST00000522987 F2RL1P55085 397 aa12.09□□□□□ -0.47
MRPS28-209ENST00000522987 PPP3R1P63098 170 aa12.09□□□□□ -0.47
MRPS28-209ENST00000522987 RAB40BQ12829 278 aa12.09□□□□□ -0.47
MRPS28-209ENST00000522987 EBI3Q14213 229 aa12.09□□□□□ -0.47
MRPS28-209ENST00000522987 PNLIPRP3Q17RR3 467 aa12.09□□□□□ -0.47
MRPS28-209ENST00000522987 ASCL4Q6XD76 172 aa12.09□□□□□ -0.47
MRPS28-209ENST00000522987 TGIF2LXQ8IUE1 241 aa12.09□□□□□ -0.47
MRPS28-209ENST00000522987 IZUMO1Q8IYV9 350 aa12.09□□□□□ -0.47
MRPS28-209ENST00000522987 COMMD1Q8N668 190 aa12.09□□□□□ -0.47
MRPS28-209ENST00000522987 ZFP41Q8N8Y5 198 aa12.09□□□□□ -0.47
MRPS28-209ENST00000522987 Q8NFD4 153 aa12.09□□□□□ -0.47
MRPS28-209ENST00000522987 OR10A7Q8NGE5 316 aa12.09□□□□□ -0.47
MRPS28-209ENST00000522987 Q96MT0 163 aa12.09□□□□□ -0.47
MRPS28-209ENST00000522987 RASL11BQ9BPW5 248 aa12.09□□□□□ -0.47
MRPS28-209ENST00000522987 PLSCR3Q9NRY6 295 aa12.09□□□□□ -0.47
MRPS28-209ENST00000522987 LIN7CQ9NUP9 197 aaKnown RBP12.09□□□□□ -0.47
MRPS28-209ENST00000522987 LOC100130705A0A1B0GUX0 176 aa12.08□□□□□ -0.48
MRPS28-209ENST00000522987 A0A1W2PPK0 400 aa12.08□□□□□ -0.48
MRPS28-209ENST00000522987 SEC14L6B5MCN3 397 aa12.08□□□□□ -0.48
MRPS28-209ENST00000522987 GZMHP20718 246 aa12.08□□□□□ -0.48
MRPS28-209ENST00000522987 IL3RAP26951 378 aa12.08□□□□□ -0.48
MRPS28-209ENST00000522987 BDKRB2P30411 391 aa12.08□□□□□ -0.48
MRPS28-209ENST00000522987 MRPL28Q13084 256 aaKnown RBP12.08□□□□□ -0.48
MRPS28-209ENST00000522987 SLC16A12Q6ZSM3 486 aa12.08□□□□□ -0.48
MRPS28-209ENST00000522987 TMEM104Q8NE00 496 aa12.08□□□□□ -0.48
MRPS28-209ENST00000522987 OR5M8Q8NGP6 311 aa12.08□□□□□ -0.48
MRPS28-209ENST00000522987 OR1L1Q8NH94 360 aa12.08□□□□□ -0.48
MRPS28-209ENST00000522987 OR5B12Q96R08 314 aa12.08□□□□□ -0.48
MRPS28-209ENST00000522987 MYCBPQ99417 103 aaPredicted RBP12.08□□□□□ -0.48
MRPS28-209ENST00000522987 S1PR3Q99500 378 aa12.08□□□□□ -0.48
MRPS28-209ENST00000522987 ZNF184Q99676 751 aaPredicted RBP12.08□□□□□ -0.48
MRPS28-209ENST00000522987 TMEM138Q9NPI0 162 aa12.08□□□□□ -0.48
MRPS28-209ENST00000522987 GNG12Q9UBI6 72 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms