RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 IGHV3-72A0A0B4J1Y9 119 aa11.98□□□□□ -0.49
CSMD1-207ENST00000520451 IGHV1-3A0A0C4DH29 117 aa11.98□□□□□ -0.49
CSMD1-207ENST00000520451 CCRL2O00421 344 aa11.98□□□□□ -0.49
CSMD1-207ENST00000520451 GEMIN2O14893 280 aaKnown RBP11.98□□□□□ -0.49
CSMD1-207ENST00000520451 IGHG2P01859 326 aa11.98□□□□□ -0.49
CSMD1-207ENST00000520451 GAPDHP04406 335 aaKnown RBP11.98□□□□□ -0.49
CSMD1-207ENST00000520451 GZMHP20718 246 aa11.98□□□□□ -0.49
CSMD1-207ENST00000520451 SERPINA2P20848 420 aa11.98□□□□□ -0.49
CSMD1-207ENST00000520451 THBS3P49746 956 aa11.98□□□□□ -0.49
CSMD1-207ENST00000520451 ETV1P50549 477 aa11.98□□□□□ -0.49
CSMD1-207ENST00000520451 EGFEM1PQ0D2K5 195 aa11.98□□□□□ -0.49
CSMD1-207ENST00000520451 ZNF816Q0VGE8 651 aaPredicted RBP11.98□□□□□ -0.49
CSMD1-207ENST00000520451 SMN1Q16637 294 aaKnown RBP11.98□□□□□ -0.49
CSMD1-207ENST00000520451 VAX1Q5SQQ9 334 aa11.98□□□□□ -0.49
CSMD1-207ENST00000520451 ATAD3CQ5T2N8 411 aa11.98□□□□□ -0.49
CSMD1-207ENST00000520451 OR2G6Q5TZ20 316 aa11.98□□□□□ -0.49
CSMD1-207ENST00000520451 TMPRSS11AQ6ZMR5 421 aa11.98□□□□□ -0.49
CSMD1-207ENST00000520451 LINC00596Q86U02 117 aa11.98□□□□□ -0.49
CSMD1-207ENST00000520451 FOXRED2Q8IWF2 684 aa11.98□□□□□ -0.49
CSMD1-207ENST00000520451 KLHL30-AS1Q8NEE0 82 aa11.98□□□□□ -0.49
CSMD1-207ENST00000520451 UBALD1Q8TB05 177 aa11.98□□□□□ -0.49
CSMD1-207ENST00000520451 CCDC107Q8WV48 283 aa11.98□□□□□ -0.49
CSMD1-207ENST00000520451 ARL11Q969Q4 196 aa11.98□□□□□ -0.49
CSMD1-207ENST00000520451 ZFP57Q9NU63 452 aa11.98□□□□□ -0.49
CSMD1-207ENST00000520451 PAK1IP1Q9NWT1 392 aaPredicted RBP11.98□□□□□ -0.49
CSMD1-207ENST00000520451 NCBP2LA6PVI3 153 aaKnown RBP11.97□□□□□ -0.49
CSMD1-207ENST00000520451 C15orf65H3BRN8 121 aa11.97□□□□□ -0.49
CSMD1-207ENST00000520451 SDCBPO00560 298 aaPredicted RBP11.97□□□□□ -0.49
CSMD1-207ENST00000520451 WBP4O75554 376 aaKnown RBP11.97□□□□□ -0.49
CSMD1-207ENST00000520451 DCKP27707 260 aa11.97□□□□□ -0.49
CSMD1-207ENST00000520451 BDKRB2P30411 391 aa11.97□□□□□ -0.49
CSMD1-207ENST00000520451 SLC6A1P30531 599 aa11.97□□□□□ -0.49
CSMD1-207ENST00000520451 SLC22A6Q4U2R8 563 aa11.97□□□□□ -0.49
CSMD1-207ENST00000520451 IZUMO1Q8IYV9 350 aa11.97□□□□□ -0.49
CSMD1-207ENST00000520451 PQLC1Q8N2U9 271 aa11.97□□□□□ -0.49
CSMD1-207ENST00000520451 STPG2Q8N412 459 aa11.97□□□□□ -0.49
CSMD1-207ENST00000520451 COMMD1Q8N668 190 aa11.97□□□□□ -0.49
CSMD1-207ENST00000520451 ZNF555Q8NEP9 628 aa11.97□□□□□ -0.49
CSMD1-207ENST00000520451 OR13C5Q8NGS8 318 aa11.97□□□□□ -0.49
CSMD1-207ENST00000520451 NEK7Q8TDX7 302 aa11.97□□□□□ -0.49
CSMD1-207ENST00000520451 ORAI1Q96D31 301 aa11.97□□□□□ -0.49
CSMD1-207ENST00000520451 EAF1Q96JC9 268 aaPredicted RBP11.97□□□□□ -0.49
CSMD1-207ENST00000520451 S100A14Q9HCY8 104 aa11.97□□□□□ -0.49
CSMD1-207ENST00000520451 SIRT4Q9Y6E7 314 aaPredicted RBP11.97□□□□□ -0.49
CSMD1-207ENST00000520451 IGHV3-43A0A0B4J1X8 118 aa11.96□□□□□ -0.49
CSMD1-207ENST00000520451 LINC01548A6NM66 108 aa11.96□□□□□ -0.49
CSMD1-207ENST00000520451 ZNF780AO75290 641 aaPredicted RBP11.96□□□□□ -0.49
CSMD1-207ENST00000520451 IGHV3-43DP0DP04 118 aa11.96□□□□□ -0.49
CSMD1-207ENST00000520451 MYCNOSP40205 109 aa11.96□□□□□ -0.49
CSMD1-207ENST00000520451 RIPK1Q13546 671 aa11.96□□□□□ -0.49
CSMD1-207ENST00000520451 EBI3Q14213 229 aa11.96□□□□□ -0.49
CSMD1-207ENST00000520451 MPV17LQ2QL34 196 aa11.96□□□□□ -0.49
CSMD1-207ENST00000520451 FAM53AQ6NSI3 398 aaPredicted RBP11.96□□□□□ -0.49
CSMD1-207ENST00000520451 C11orf87Q6NUJ2 197 aa11.96□□□□□ -0.49
CSMD1-207ENST00000520451 TGIF2LXQ8IUE1 241 aa11.96□□□□□ -0.49
CSMD1-207ENST00000520451 LINC00311Q8N616 119 aa11.96□□□□□ -0.49
CSMD1-207ENST00000520451 OR52M1Q8NGK5 317 aa11.96□□□□□ -0.49
CSMD1-207ENST00000520451 SMIM19Q96E16 107 aa11.96□□□□□ -0.49
CSMD1-207ENST00000520451 ZNF184Q99676 751 aaPredicted RBP11.96□□□□□ -0.49
CSMD1-207ENST00000520451 MCRIP2Q9BUT9 160 aaKnown RBP11.96□□□□□ -0.49
CSMD1-207ENST00000520451 GFOD1Q9NXC2 390 aa11.96□□□□□ -0.49
CSMD1-207ENST00000520451 A0A1W2PP11 408 aa11.95□□□□□ -0.5
CSMD1-207ENST00000520451 AIPO00170 330 aa11.95□□□□□ -0.5
CSMD1-207ENST00000520451 AP4M1O00189 453 aa11.95□□□□□ -0.5
CSMD1-207ENST00000520451 OGG1O15527 345 aa11.95□□□□□ -0.5
CSMD1-207ENST00000520451 GTF2F2P13984 249 aa11.95□□□□□ -0.5
CSMD1-207ENST00000520451 MYL12AP19105 171 aa11.95□□□□□ -0.5
CSMD1-207ENST00000520451 IL3RAP26951 378 aa11.95□□□□□ -0.5
CSMD1-207ENST00000520451 GPR12P47775 334 aa11.95□□□□□ -0.5
CSMD1-207ENST00000520451 ZNF497Q6ZNH5 498 aa11.95□□□□□ -0.5
CSMD1-207ENST00000520451 ZNF695Q8IW36 515 aa11.95□□□□□ -0.5
CSMD1-207ENST00000520451 STX19Q8N4C7 294 aa11.95□□□□□ -0.5
CSMD1-207ENST00000520451 Q8N6K4 173 aa11.95□□□□□ -0.5
CSMD1-207ENST00000520451 C8orf31Q8N9H6 132 aa11.95□□□□□ -0.5
CSMD1-207ENST00000520451 OR2T10Q8NGZ9 312 aa11.95□□□□□ -0.5
CSMD1-207ENST00000520451 DUX3Q96PT4 197 aa11.95□□□□□ -0.5
CSMD1-207ENST00000520451 P2RX4Q99571 388 aa11.95□□□□□ -0.5
CSMD1-207ENST00000520451 LIN7CQ9NUP9 197 aaKnown RBP11.95□□□□□ -0.5
CSMD1-207ENST00000520451 BABAM2Q9NXR7 383 aa11.95□□□□□ -0.5
CSMD1-207ENST00000520451 SMPD3Q9NY59 655 aaPredicted RBP11.95□□□□□ -0.5
CSMD1-207ENST00000520451 NBEAL2Q6ZNJ1 2754 aa11.95□□□□□ -0.5
CSMD1-207ENST00000520451 IRGMA1A4Y4 181 aa11.94□□□□□ -0.5
CSMD1-207ENST00000520451 MAGEA13PA6NCF6 341 aa11.94□□□□□ -0.5
CSMD1-207ENST00000520451 ORC5O43913 435 aa11.94□□□□□ -0.5
CSMD1-207ENST00000520451 LALBAP00709 142 aa11.94□□□□□ -0.5
CSMD1-207ENST00000520451 MT-ND4P03905 459 aa11.94□□□□□ -0.5
CSMD1-207ENST00000520451 IGFBP3P17936 291 aaPredicted RBP11.94□□□□□ -0.5
CSMD1-207ENST00000520451 RAB25P57735 213 aa11.94□□□□□ -0.5
CSMD1-207ENST00000520451 CD69Q07108 199 aa11.94□□□□□ -0.5
CSMD1-207ENST00000520451 TEX38Q6PEX7 206 aa11.94□□□□□ -0.5
CSMD1-207ENST00000520451 Q8N9W7 124 aa11.94□□□□□ -0.5
CSMD1-207ENST00000520451 RTN4IP1Q8WWV3 396 aaPredicted RBP11.94□□□□□ -0.5
CSMD1-207ENST00000520451 GHSRQ92847 366 aa11.94□□□□□ -0.5
CSMD1-207ENST00000520451 ABCG5Q9H222 651 aa11.94□□□□□ -0.5
CSMD1-207ENST00000520451 CKLFQ9UBR5 152 aa11.94□□□□□ -0.5
CSMD1-207ENST00000520451 CLEC2DQ9UHP7 191 aa11.94□□□□□ -0.5
CSMD1-207ENST00000520451 DIMT1Q9UNQ2 313 aaKnown RBP11.94□□□□□ -0.5
CSMD1-207ENST00000520451 EXOSC1Q9Y3B2 195 aaKnown RBP11.94□□□□□ -0.5
CSMD1-207ENST00000520451 KMT2CQ8NEZ4 4911 aaKnown RBP11.93□□□□□ -0.5
CSMD1-207ENST00000520451 TRAV8-7A0A075B6U6 113 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms