RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 ZNF546Q86UE3 836 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 LRP11Q86VZ4 500 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 SAXO1Q8IYX7 474 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 WFDC11Q8NEX6 87 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 TMEM185AQ8NFB2 350 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 OR4C16Q8NGL9 310 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 OR13C5Q8NGS8 318 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 STOML3Q8TAV4 291 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 TNFAIP8L1Q8WVP5 186 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 ZNRF4Q8WWF5 429 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 OR5P3Q8WZ94 311 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 DERL3Q96Q80 235 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 OR14A2Q96R54 314 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 JMJD8Q96S16 334 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 SLC25A21Q9BQT8 299 aaPredicted RBP4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 TCEAL7Q9BRU2 100 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 SEC11CQ9BY50 192 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 TTTY10Q9BZA0 68 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 ZNF665Q9H7R5 613 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 SEBOXQ9HB31 216 aaPredicted RBP4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 SPACA1Q9HBV2 294 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 GCM1Q9NP62 436 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 NOX4Q9NPH5 578 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 TMEM138Q9NPI0 162 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 TMEM160Q9NX00 188 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 GHRLQ9UBU3 117 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 KLK11Q9UBX7 282 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 CLN8Q9UBY8 286 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 WIPI2Q9Y4P8 454 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 ALPK2Q86TB3 2170 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 ITPR2Q14571 2701 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 CADP27708 2225 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 IGHV4-30-2A0A087WSY4 118 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 TRBV5-7A0A0A0MS05 114 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 TRBV23-1A0A0A0MS06 115 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 TRBV5-5A0A0J9YX44 114 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 FAM230AA0A1W2PPH8 454 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 LINC00587B1AMM8 73 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 ZNF732B4DXR9 585 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 F8VVB4 439 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 F8VWA3 439 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 GPR31O00270 319 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 EIF3GO75821 320 aaKnown RBP eCLIP4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 RLN1P04808 185 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 S100A9P06702 114 aaKnown RBP4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 FABP1P07148 127 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 MSMBP08118 114 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 FAHP16930 419 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 MPZP25189 248 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 S100PP25815 95 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 BDKRB2P30411 391 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 SRP14P37108 136 aaKnown RBP4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 HAAOP46952 286 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 GPM6AP51674 278 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 ARHGDIBP52566 201 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 HCCSP53701 268 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 DVL1P1P54792 670 aaPredicted RBP4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 BPIFB3P59826 476 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 RAB5BP61020 215 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 IL13RA1P78552 427 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 PNLIPRP3Q17RR3 467 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 ODF4Q2M2E3 257 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 CHRFAM7AQ494W8 412 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 RNF212Q495C1 297 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 Q499Y3 187 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 NKAPLQ5M9Q1 402 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 LY6G6FQ5SQ64 297 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 OTPQ5XKR4 325 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 C11orf87Q6NUJ2 197 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 RBMS3Q6XE24 437 aaKnown RBP4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 IL34Q6ZMJ4 242 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 LINC00596Q86U02 117 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 LRRTM1Q86UE6 522 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 TMEM229BQ8NBD8 167 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 CHST4Q8NCG5 386 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 OR51A2Q8NGJ7 313 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 OR52B4Q8NGK2 314 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 OR5D13Q8NGL4 314 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 OR5M8Q8NGP6 311 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 LRRC29Q8WV35 223 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 ARL11Q969Q4 196 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 TMEM106AQ96A25 262 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 AMELYQ99218 206 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 SOX7Q9BT81 388 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 SSBP3Q9BWW4 388 aaPredicted RBP4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 CST11Q9H112 138 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 TLNRD1Q9H1K6 362 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 OR51M1Q9H341 326 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 ELL3Q9HB65 397 aaPredicted RBP4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 G6PC2Q9NQR9 355 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 UFSP2Q9NUQ7 469 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 KLHDC2Q9Y2U9 406 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 RHBDD3Q9Y3P4 386 aa4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 RAI1Q7Z5J4 1906 aaPredicted RBP4.75□□□□□ -1.65
CTNNA1-220ENST00000520260 ROS1P08922 2347 aa4.74□□□□□ -1.65
CTNNA1-220ENST00000520260 ARID1AO14497 2285 aa4.74□□□□□ -1.65
CTNNA1-220ENST00000520260 TRBV6-7A0A0A0MS04 114 aa4.74□□□□□ -1.65
CTNNA1-220ENST00000520260 A0A1W2PPK0 400 aa4.74□□□□□ -1.65
CTNNA1-220ENST00000520260 MEX3AA1L020 520 aaKnown RBP4.74□□□□□ -1.65
CTNNA1-220ENST00000520260 C5orf52A6NGY3 159 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms