RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 LALBAP00709 142 aa20.12■□□□□ 0.81
VEGFA-220ENST00000519767 PRB2P02812 416 aaPredicted RBP20.12■□□□□ 0.81
VEGFA-220ENST00000519767 GAPDHP04406 335 aaKnown RBP20.12■□□□□ 0.81
VEGFA-220ENST00000519767 SERPINA2P20848 420 aa20.12■□□□□ 0.81
VEGFA-220ENST00000519767 TAS2R43P59537 309 aa20.12■□□□□ 0.81
VEGFA-220ENST00000519767 ADARB1P78563 741 aaKnown RBP20.12■□□□□ 0.81
VEGFA-220ENST00000519767 ST3GAL4Q11206 333 aa20.12■□□□□ 0.81
VEGFA-220ENST00000519767 HES1Q14469 280 aa20.12■□□□□ 0.81
VEGFA-220ENST00000519767 SLC22A6Q4U2R8 563 aa20.12■□□□□ 0.81
VEGFA-220ENST00000519767 STX19Q8N4C7 294 aa20.12■□□□□ 0.81
VEGFA-220ENST00000519767 C8orf31Q8N9H6 132 aa20.12■□□□□ 0.81
VEGFA-220ENST00000519767 ZNF485Q8NCK3 441 aa20.12■□□□□ 0.81
VEGFA-220ENST00000519767 GGHQ92820 318 aa20.12■□□□□ 0.81
VEGFA-220ENST00000519767 ARL11Q969Q4 196 aa20.12■□□□□ 0.81
VEGFA-220ENST00000519767 ZNF581Q9P0T4 197 aa20.12■□□□□ 0.81
VEGFA-220ENST00000519767 TRAV39A0A0B4J263 110 aa20.11■□□□□ 0.81
VEGFA-220ENST00000519767 EFCAB10A6NFE3 127 aa20.11■□□□□ 0.81
VEGFA-220ENST00000519767 SH2D7A6NKC9 451 aaPredicted RBP20.11■□□□□ 0.81
VEGFA-220ENST00000519767 TMEM11P17152 192 aa20.11■□□□□ 0.81
VEGFA-220ENST00000519767 GNG10P50151 68 aa20.11■□□□□ 0.81
VEGFA-220ENST00000519767 RPS11P62280 158 aaKnown RBP eCLIP20.11■□□□□ 0.81
VEGFA-220ENST00000519767 Q6ZPA2 131 aa20.11■□□□□ 0.81
VEGFA-220ENST00000519767 OR13C5Q8NGS8 318 aa20.11■□□□□ 0.81
VEGFA-220ENST00000519767 NEK7Q8TDX7 302 aa20.11■□□□□ 0.81
VEGFA-220ENST00000519767 ORAI1Q96D31 301 aa20.11■□□□□ 0.81
VEGFA-220ENST00000519767 RAB9BQ9NP90 201 aa20.11■□□□□ 0.81
VEGFA-220ENST00000519767 PF4P02776 101 aa20.1■□□□□ 0.81
VEGFA-220ENST00000519767 MT-ND4P03905 459 aa20.1■□□□□ 0.81
VEGFA-220ENST00000519767 FSTP19883 344 aa20.1■□□□□ 0.81
VEGFA-220ENST00000519767 LOXL3P58215 753 aa20.1■□□□□ 0.81
VEGFA-220ENST00000519767 ZNF816Q0VGE8 651 aaPredicted RBP20.1■□□□□ 0.81
VEGFA-220ENST00000519767 ZNF497Q6ZNH5 498 aa20.1■□□□□ 0.81
VEGFA-220ENST00000519767 LINC00311Q8N616 119 aa20.1■□□□□ 0.81
VEGFA-220ENST00000519767 CHPT1Q8WUD6 406 aa20.1■□□□□ 0.81
VEGFA-220ENST00000519767 PHF21AQ96BD5 680 aa20.1■□□□□ 0.81
VEGFA-220ENST00000519767 CNOT2Q9NZN8 540 aaKnown RBP20.1■□□□□ 0.81
VEGFA-220ENST00000519767 TRBV5-7A0A0A0MS05 114 aa20.09■□□□□ 0.81
VEGFA-220ENST00000519767 PSMB11A5LHX3 300 aa20.09■□□□□ 0.81
VEGFA-220ENST00000519767 MCRIP1C9JLW8 97 aa20.09■□□□□ 0.81
VEGFA-220ENST00000519767 C15orf65H3BRN8 121 aa20.09■□□□□ 0.81
VEGFA-220ENST00000519767 CCRL2O00421 344 aa20.09■□□□□ 0.81
VEGFA-220ENST00000519767 PIN1P1O15428 100 aa20.09■□□□□ 0.81
VEGFA-220ENST00000519767 SLC35A2P78381 396 aa20.09■□□□□ 0.81
VEGFA-220ENST00000519767 EBI3Q14213 229 aa20.09■□□□□ 0.81
VEGFA-220ENST00000519767 DIAPH2-AS1Q14236 149 aa20.09■□□□□ 0.81
VEGFA-220ENST00000519767 HNF4GQ14541 408 aa20.09■□□□□ 0.81
VEGFA-220ENST00000519767 Q3ZCU0 254 aa20.09■□□□□ 0.81
VEGFA-220ENST00000519767 C5orf56Q8N8D9 126 aa20.09■□□□□ 0.81
VEGFA-220ENST00000519767 PGLYRP3Q96LB9 341 aa20.09■□□□□ 0.81
VEGFA-220ENST00000519767 TRAV8-7A0A075B6U6 113 aa20.08■□□□□ 0.81
VEGFA-220ENST00000519767 SDCBPO00560 298 aaPredicted RBP20.08■□□□□ 0.81
VEGFA-220ENST00000519767 HSD17B6O14756 317 aa20.08■□□□□ 0.81
VEGFA-220ENST00000519767 DUS4LO95620 317 aaKnown RBP20.08■□□□□ 0.81
VEGFA-220ENST00000519767 IGKV1D-33P01593 117 aa20.08■□□□□ 0.81
VEGFA-220ENST00000519767 IGKV1-33P01594 117 aa20.08■□□□□ 0.81
VEGFA-220ENST00000519767 CD1AP06126 327 aa20.08■□□□□ 0.81
VEGFA-220ENST00000519767 IGLL1P15814 213 aa20.08■□□□□ 0.81
VEGFA-220ENST00000519767 MOB3BQ86TA1 216 aa20.08■□□□□ 0.81
VEGFA-220ENST00000519767 JAGN1Q8N5M9 183 aa20.08■□□□□ 0.81
VEGFA-220ENST00000519767 MRAPQ8TCY5 172 aa20.08■□□□□ 0.81
VEGFA-220ENST00000519767 CCDC107Q8WV48 283 aa20.08■□□□□ 0.81
VEGFA-220ENST00000519767 THRSPQ92748 146 aa20.08■□□□□ 0.81
VEGFA-220ENST00000519767 RCC1LQ96I51 464 aaKnown RBP20.08■□□□□ 0.81
VEGFA-220ENST00000519767 GFOD1Q9NXC2 390 aa20.08■□□□□ 0.81
VEGFA-220ENST00000519767 MRPS28Q9Y2Q9 187 aaKnown RBP20.08■□□□□ 0.81
VEGFA-220ENST00000519767 IGHV1-3A0A0C4DH29 117 aa20.07■□□□□ 0.8
VEGFA-220ENST00000519767 A0A1W2PPE3 182 aa20.07■□□□□ 0.8
VEGFA-220ENST00000519767 IL3RAP26951 378 aa20.07■□□□□ 0.8
VEGFA-220ENST00000519767 TMEM30BQ3MIR4 351 aa20.07■□□□□ 0.8
VEGFA-220ENST00000519767 KHDC1LQ5JSQ8 128 aa20.07■□□□□ 0.8
VEGFA-220ENST00000519767 FOXB2Q5VYV0 432 aa20.07■□□□□ 0.8
VEGFA-220ENST00000519767 C10orf99Q6UWK7 81 aa20.07■□□□□ 0.8
VEGFA-220ENST00000519767 GLIPR1L1Q6UWM5 242 aa20.07■□□□□ 0.8
VEGFA-220ENST00000519767 C8orf59Q8N0T1 100 aaPredicted RBP20.07■□□□□ 0.8
VEGFA-220ENST00000519767 ZFP41Q8N8Y5 198 aa20.07■□□□□ 0.8
VEGFA-220ENST00000519767 MUL1Q969V5 352 aa20.07■□□□□ 0.8
VEGFA-220ENST00000519767 OR14A2Q96R54 314 aa20.07■□□□□ 0.8
VEGFA-220ENST00000519767 PLCXD1Q9NUJ7 323 aa20.07■□□□□ 0.8
VEGFA-220ENST00000519767 RCC2Q9P258 522 aaKnown RBP20.07■□□□□ 0.8
VEGFA-220ENST00000519767 A0A1W2PP11 408 aa20.06■□□□□ 0.8
VEGFA-220ENST00000519767 FAM90A10PA6NDY2 464 aa20.06■□□□□ 0.8
VEGFA-220ENST00000519767 FAM90A7PA6NKC0 464 aa20.06■□□□□ 0.8
VEGFA-220ENST00000519767 FAM90A23PA8MXZ1 464 aa20.06■□□□□ 0.8
VEGFA-220ENST00000519767 AIPO00170 330 aa20.06■□□□□ 0.8
VEGFA-220ENST00000519767 SPINT2O43291 252 aa20.06■□□□□ 0.8
VEGFA-220ENST00000519767 GLAP06280 429 aa20.06■□□□□ 0.8
VEGFA-220ENST00000519767 CAPGP40121 348 aa20.06■□□□□ 0.8
VEGFA-220ENST00000519767 DOC2BQ14184 412 aa20.06■□□□□ 0.8
VEGFA-220ENST00000519767 PSORS1C1Q9UIG5 152 aa20.06■□□□□ 0.8
VEGFA-220ENST00000519767 A0A1W2PPK0 400 aa20.05■□□□□ 0.8
VEGFA-220ENST00000519767 MAGEA13PA6NCF6 341 aa20.05■□□□□ 0.8
VEGFA-220ENST00000519767 SERPINE3A8MV23 424 aa20.05■□□□□ 0.8
VEGFA-220ENST00000519767 CA11O75493 328 aa20.05■□□□□ 0.8
VEGFA-220ENST00000519767 IGHG2P01859 326 aa20.05■□□□□ 0.8
VEGFA-220ENST00000519767 SLC6A1P30531 599 aa20.05■□□□□ 0.8
VEGFA-220ENST00000519767 SLC35B1P78383 322 aa20.05■□□□□ 0.8
VEGFA-220ENST00000519767 COMMD1Q8N668 190 aa20.05■□□□□ 0.8
VEGFA-220ENST00000519767 OR2T10Q8NGZ9 312 aa20.05■□□□□ 0.8
VEGFA-220ENST00000519767 ZFP57Q9NU63 452 aa20.05■□□□□ 0.8
VEGFA-220ENST00000519767 AURKAIP1Q9NWT8 199 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms