RNA–Protein interactions for RNA: ENST00000518963.5

PSD3-208, Transcript of pleckstrin and Sec7 domain containing 3, human

TSL 2

Gene PSD3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSD3-208	ENST00000518963	ARMC1	Q9NVT9	282 aa		2.56	□□□□□ -2
PSD3-208	ENST00000518963	TMEM216	Q9P0N5	145 aa		2.56	□□□□□ -2
PSD3-208	ENST00000518963	ZNF223	Q9UK11	482 aa	Predicted RBP	2.56	□□□□□ -2
PSD3-208	ENST00000518963	C14orf166	Q9Y224	244 aa	Known RBP	2.56	□□□□□ -2
PSD3-208	ENST00000518963	FAM32A	Q9Y421	112 aa	Known RBP	2.56	□□□□□ -2
PSD3-208	ENST00000518963	COL16A1	Q07092	1604 aa	Predicted RBP	2.56	□□□□□ -2
PSD3-208	ENST00000518963	IGHV6-1	A0A0B4J1U7	121 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	IGKV1-8	A0A0C4DH67	115 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963		A0A0X1KG70	313 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	CCDC144A	A2RUR9	1427 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	C5orf49	A4QMS7	147 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	OR6C6	A6NF89	314 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	ZNF705G	A8MUZ8	300 aa	Predicted RBP	2.55	□□□□□ -2
PSD3-208	ENST00000518963	ZNF878	C9JN71	531 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	2.55	□□□□□ -2
PSD3-208	ENST00000518963	TSTD3	H0UI37	97 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963		M0R1X1	148 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	DNASE2	O00115	360 aa	Predicted RBP	2.55	□□□□□ -2
PSD3-208	ENST00000518963	COX7A2P2	O60397	106 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	CA11	O75493	328 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	ATG12	O94817	140 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	SLC25A14	O95258	325 aa	Predicted RBP	2.55	□□□□□ -2
PSD3-208	ENST00000518963	DHFR	P00374	187 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	CA2	P00918	260 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	IFNA1	P01562	189 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	CRISP2	P16562	243 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	HIST1H1T	P22492	207 aa	Predicted RBP	2.55	□□□□□ -2
PSD3-208	ENST00000518963	GADD45A	P24522	165 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	CTRL	P40313	264 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	OR1E2	P47887	323 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	GABRA4	P48169	554 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	TCTA	P57738	103 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	IFITM2	Q01629	132 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	SMCO1	Q147U7	214 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	CDK10	Q15131	360 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	SNRNP35	Q16560	246 aa	Known RBP	2.55	□□□□□ -2
PSD3-208	ENST00000518963	ZNF404	Q494X3	552 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	ELP2	Q6IA86	826 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	ZNF530	Q6P9A1	599 aa	Predicted RBP	2.55	□□□□□ -2
PSD3-208	ENST00000518963	TMEM144	Q7Z5S9	345 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	C1orf158	Q8N1D5	194 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	SLC25A45	Q8N413	288 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	DCAF4L2	Q8NA75	395 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	NPB	Q8NG41	125 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	OR4M1	Q8NGD0	313 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	OR10A6	Q8NH74	314 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	SPPL2B	Q8TCT7	592 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	ABHD3	Q8WU67	409 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	CCL17	Q92583	94 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	YIPF5	Q969M3	257 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	CLDN23	Q96B33	292 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	BORCS7	Q96B45	105 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	SFRP2	Q96HF1	295 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	DIRAS2	Q96HU8	199 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	TMEM101	Q96IK0	257 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	SLC35E1	Q96K37	410 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	YPEL4	Q96NS1	127 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	SPACA5	Q96QH8	159 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	TBL1XR1	Q9BZK7	514 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	HES4	Q9HCC6	221 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	ENY2	Q9NPA8	101 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	OPTC	Q9UBM4	332 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	VPREB3	Q9UKI3	123 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	SLC22A7	Q9Y694	548 aa		2.55	□□□□□ -2
PSD3-208	ENST00000518963	VWA8	A3KMH1	1905 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	SYNM	O15061	1565 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	PTPRK	Q15262	1439 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	ASTN1	O14525	1302 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	MYBPHL	A2RUH7	354 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	TRIM49D1	C9J1S8	452 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	C8orf87	E5RJ46	101 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	PPP5D1	E7EU14	171 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	C15orf65	H3BRN8	121 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	UPK1A	O00322	258 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	ANGPTL7	O43827	346 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	OR7C1	O76099	320 aa	Predicted RBP	2.54	□□□□□ -2
PSD3-208	ENST00000518963	CRH	P06850	196 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	OR13C7	P0DN81	318 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	CXCL3	P19876	107 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	SERPINB1	P30740	379 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	RPL5	P46777	297 aa	Known RBP	2.54	□□□□□ -2
PSD3-208	ENST00000518963	MARCKSL1	P49006	195 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	GFER	P55789	205 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	TMEM33	P57088	247 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	PPP1CA	P62136	330 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	GRB2	P62993	217 aa	Known RBP	2.54	□□□□□ -2
PSD3-208	ENST00000518963	ERCC8	Q13216	396 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	SSX1	Q16384	188 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	TMEM183B	Q1AE95	376 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	ACOT6	Q3I5F7	207 aa	Predicted RBP	2.54	□□□□□ -2
PSD3-208	ENST00000518963	CLLU1OS	Q5K130	101 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	FAM78B	Q5VT40	261 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	NXNL2	Q5VZ03	156 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	TMEM183A	Q8IXX5	376 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	DRAM1	Q8N682	238 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	OR1J4	Q8NGS1	313 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	OR1P1	Q8NH06	330 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	OR13C6P	Q8NH95	151 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	TWIST2	Q8WVJ9	160 aa		2.54	□□□□□ -2
PSD3-208	ENST00000518963	TNFAIP8L1	Q8WVP5	186 aa		2.54	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms