RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 HIST1H2BNQ99877 126 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 HIST1H2BMQ99879 126 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 GCM1Q9NP62 436 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 BOKQ9UMX3 212 aaPredicted RBP5.79□□□□□ -1.48
CPNE3-203ENST00000517490 FRMPD3Q5JV73 1810 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 IGSF23A1L1A6 192 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 PGPEP1LA6NFU8 196 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 H0Y980 276 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 TRAF3IP2O43734 574 aaPredicted RBP5.79□□□□□ -1.48
CPNE3-203ENST00000517490 NXPH2O95156 264 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 CCL1P22362 96 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 OTX2P32243 289 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 GPM6AP51674 278 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 SPCS3P61009 180 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 UBE2NP61088 152 aaKnown RBP5.79□□□□□ -1.48
CPNE3-203ENST00000517490 KCNMB1Q16558 191 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 ASPHD2Q6ICH7 369 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 RHBDD2Q6NTF9 364 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 OR4A16Q8NH70 328 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 CMTM2Q8TAZ6 248 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 MRPL30Q8TCC3 161 aaKnown RBP5.79□□□□□ -1.48
CPNE3-203ENST00000517490 NAT6Q93015 286 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 IL22RA2Q969J5 263 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 ALKBH3Q96Q83 286 aaPredicted RBP5.79□□□□□ -1.48
CPNE3-203ENST00000517490 ZNF665Q9H7R5 613 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 SLC25A22Q9H936 323 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 ALPK2Q86TB3 2170 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 ANAPC1Q9H1A4 1944 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 CTXND1A0A1B0GTU2 59 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 HSBP1L1C9JCN9 74 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 IGHEP01854 428 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 CFIP05156 583 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 IGHV4-34P06331 123 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 MMP7P09237 267 aaPredicted RBP5.79□□□□□ -1.48
CPNE3-203ENST00000517490 CHRNA7P36544 502 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 LRTM2Q8N967 370 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 C18orf12Q96KH6 178 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 RTL8AQ9BWD3 113 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 SF3B5Q9BWJ5 86 aaKnown RBP5.79□□□□□ -1.48
CPNE3-203ENST00000517490 WFDC1Q9HC57 220 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 HEYLQ9NQ87 328 aaPredicted RBP5.79□□□□□ -1.48
CPNE3-203ENST00000517490 POLDIP2Q9Y2S7 368 aa5.79□□□□□ -1.48
CPNE3-203ENST00000517490 SCN2AQ99250 2005 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 IGKV3D-11A0A0A0MRZ8 115 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 FAM90A10PA6NDY2 464 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 FAM90A18PA6NE21 464 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 FAM90A16PA6NEW6 464 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 FAM90A20PA6NIJ5 464 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 FAM90A8PA6NJQ4 464 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 FAM90A7PA6NKC0 464 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 FAM90A22PA8MWA6 464 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 FAM90A12PA8MX19 464 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 FAM90A5PA8MXJ8 464 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 FAM90A23PA8MXZ1 464 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 C9JQL5 133 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 CXCL13O43927 109 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 SRSF10O75494 262 aaKnown RBP5.78□□□□□ -1.48
CPNE3-203ENST00000517490 IGHV2-5P01817 119 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 FAM90A15PP0C7V4 464 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 FAM90A13PP0C7W8 464 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 FAM90A14PP0C7W9 464 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 FAM90A24PP0C7X0 464 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 MDKP21741 143 aaPredicted RBP5.78□□□□□ -1.48
CPNE3-203ENST00000517490 CNN1P51911 297 aaKnown RBP5.78□□□□□ -1.48
CPNE3-203ENST00000517490 PRDX4Q13162 271 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 PYY3Q5JQD4 70 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 FAM27BQ5VT28 67 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 SSX7Q7RTT5 188 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 YRDCQ86U90 279 aaKnown RBP5.78□□□□□ -1.48
CPNE3-203ENST00000517490 KLHDC1Q8N7A1 406 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 OR5D13Q8NGL4 314 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 CLDND2Q8NHS1 167 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 APOBEC3DQ96AK3 386 aaPredicted RBP5.78□□□□□ -1.48
CPNE3-203ENST00000517490 GNRHR2Q96P88 292 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 AP1S3Q96PC3 154 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 HINT2Q9BX68 163 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 CHRNA10Q9GZZ6 450 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 OR51B6Q9H340 312 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 GPR27Q9NS67 375 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 PLXND1Q9Y4D7 1925 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 C5orf49A4QMS7 147 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 SLC25A6P12236 298 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 ARR3P36575 388 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 RAC1P63000 192 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 MEF2BQ02080 365 aaPredicted RBP5.78□□□□□ -1.48
CPNE3-203ENST00000517490 ICAM4Q14773 271 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 SPNS3Q6ZMD2 512 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 NUFIP2Q7Z417 695 aaKnown RBP5.78□□□□□ -1.48
CPNE3-203ENST00000517490 TGIF2LXQ8IUE1 241 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 HIST3H2BBQ8N257 126 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 RBM14Q96PK6 669 aaKnown RBP5.78□□□□□ -1.48
CPNE3-203ENST00000517490 CITED1Q99966 193 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 AKIRIN1Q9H9L7 192 aaPredicted RBP5.78□□□□□ -1.48
CPNE3-203ENST00000517490 RAB9BQ9NP90 201 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.78□□□□□ -1.48
CPNE3-203ENST00000517490 OR2W1Q9Y3N9 320 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 CNTRLQ7Z7A1 2325 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 TMEM265A0A087WTH1 108 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 LINC01565O15544 149 aa5.78□□□□□ -1.48
CPNE3-203ENST00000517490 NDUFS6O75380 124 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms