RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	C17orf100	A8MU93	164 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	VSTM5	A8MXK1	200 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	SHISA9	B4DS77	424 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	CCS	O14618	274 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	BET1	O15155	118 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	ZNF737	O75373	536 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	ADAP1	O75689	374 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	IFNA2	P01563	188 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	TK1	P04183	234 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	HEXA	P06865	529 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	OR4A8	P0C604	315 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	PSG2	P11465	335 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	EGR1	P18146	543 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	CXCL2	P19875	107 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	TNFSF4	P23510	183 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	GNRHR	P30968	328 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	PRDX2	P32119	198 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	SERPINF1	P36955	418 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	OR3A1	P47881	315 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	CEBPD	P49716	269 aa	Predicted RBP	3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	PIGP	P57054	158 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	FXYD4	P59646	89 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	GMFB	P60983	142 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	HERV-K104	P61576	105 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	SNRPD2	P62316	118 aa	Known RBP	3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	TNFAIP6	P98066	277 aa	Predicted RBP	3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	CYCS	P99999	105 aa	Known RBP	3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	HOXA4	Q00056	320 aa	Predicted RBP	3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	SORD	Q00796	357 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	COL10A1	Q03692	680 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	FGL1	Q08830	312 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	IL15RA	Q13261	267 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	TMEM187	Q14656	261 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	ATXN7L3	Q14CW9	347 aa	Predicted RBP	3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	SMIM21	Q3B7S5	101 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	ABCA11P	Q4W5N1	156 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	TMEM65	Q6PI78	240 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	GSG1L	Q6UXU4	331 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	KCTD9	Q7L273	389 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	MOGAT3	Q86VF5	341 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	LDLRAD3	Q86YD5	345 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	DMRTC2	Q8IXT2	367 aa	Predicted RBP	3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	H1FOO	Q8IZA3	346 aa	Predicted RBP	3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	FAM185A	Q8N0U4	392 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	CD177	Q8N6Q3	437 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	LRTM2	Q8N967	370 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	CCDC71L	Q8N9Z2	235 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	LILRB1	Q8NHL6	650 aa	Predicted RBP	3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	GRPEL2	Q8TAA5	225 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854		Q8TCH9	128 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	ITLN1	Q8WWA0	313 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	TOMM40L	Q969M1	308 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	FAM122A	Q96E09	287 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	COQ2	Q96H96	371 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	SEC22A	Q96IW7	307 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	SNX22	Q96L94	193 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	C2orf50	Q96LR7	162 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	PDCD10	Q9BUL8	212 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	SUCNR1	Q9BXA5	334 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	NMES1	Q9C002	83 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	TOLLIP	Q9H0E2	274 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	SHARPIN	Q9H0F6	387 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	NCOR1P1	Q9H4R4	102 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	ESRP2	Q9H6T0	727 aa	Known RBP	3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	NAA60	Q9H7X0	242 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	HEXA-AS1	Q9H8Q6	139 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	SLC2A9	Q9NRM0	540 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	COQ3	Q9NZJ6	369 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	RNF7	Q9UBF6	113 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	OR14J1	Q9UGF5	321 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	NDRG3	Q9UGV2	375 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	TRAPPC2L	Q9UL33	140 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	KCNIP3	Q9Y2W7	256 aa		3.76	□□□□□ -1.81
ATP2C1-223	ENST00000515854	DCHS1	Q96JQ0	3298 aa		3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854	INTS1	Q8N201	2190 aa	Known RBP	3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854	PTPRQ	Q9UMZ3	2332 aa		3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854	TRAV39	A0A0B4J263	110 aa		3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854	IGKV1D-13	A0A0B4J2D9	117 aa		3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854	C3orf85	A0A1B0GTC6	90 aa		3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854	C13orf42	A0A1B0GVH6	325 aa		3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854	NKX2-6	A6NCS4	301 aa		3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854	C5orf51	A6NDU8	294 aa		3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854	OOEP	A6NGQ2	149 aa		3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854	FAM90A27P	A6NNH2	459 aa		3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854	FAM25E	A8MYX2	175 aa		3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854	C12orf77	C9JDV5	145 aa		3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854		E7EQL1	145 aa		3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854		L7N2F9	121 aa		3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854	GPR31	O00270	319 aa		3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854	MGST3	O14880	152 aa		3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854	SMAD7	O15105	426 aa	Known RBP	3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854	MPPED1	O15442	326 aa		3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854	TFF1	P04155	84 aa		3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854	CD3E	P07766	207 aa		3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854	WNT2	P09544	360 aa		3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854	OR5AC1	P0C628	307 aa		3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854	IGKV1-13	P0DP09	117 aa		3.75	□□□□□ -1.81
ATP2C1-223	ENST00000515854	LYL1	P12980	280 aa		3.75	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 55 ms